Gene RPB_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0192 
Symbol 
ID3907797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp214614 
End bp216680 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content63% 
IMG OID637882073 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_483814 
Protein GI86747318 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA GAACCACGCG CAACGGCGAG CCGCGATCGC CTGGATTGTT CGACGTCTTT 
ACCAACAGGA GAATCGGCAC CAAGGTCGCG ATCGGATTTG TTCTGGTCCA GGTCCTGATG
GTTGTTCTCG CCGTCCTGAA TTACTCCTCC TTCGAACATG TCAGGCAGGC CTTCGTGGCG
CTCGACCAGC GGGTTCAGGT CGTGGGCATT GTCCGCGACG TCGATCGCGG CTTCACCGCC
TTTCGTCGGT TCGTGCGCGA ATACAGCCTC ACCGGTGACG AGGCGCTGAT CAGCGAAGCA
GAGAGCCGCC AGAACGCTCT GCGGCAGAGC ATCGCGCAGG GCCTGAAGGA GATCCACGAT
CCGTCTCGCC TGGCCAAGAT GAGGGAGATC AGTCAGGCGT TCGACGCCTA CACCACGTCC
TTCGCCGACG TGTTCCGAAT GCGTCGCGAC CAGAGCAAGC TGATCCGTGA GGTGCTGGAT
CCCACCGGTC AGCAGGCACG ACTTAAGCTT GAGCAACTTC AAGCAGCGAT TACTGCCAAC
GATGGCGGGG AGACCACTTC GCTCCTCGTC GCTGAGGCGG TGAAGCAACT GCTGCTGCTG
AGGCTCGATG TGAATAAGGT GCTCGGTCGT CACGACCAAG CCGCCGCGGA CGCCGCGGAG
AAGGCCTTAG CCGACCTCAA GACAGCGATG TCGGCGCTAA AGACTGCGAT CGGTTCATCG
GCCGGCCGCA AGCAAATCGG CGAGATCGAG GTCGACATCA AGAACTACGC GAATGCTTAT
CAGAAGGCGT CGCGCGTTGC CCACGAGATC GAAGTGCTGG TCAATGGCAC GATGCCGAAA
GCCGCGACGG CGATCGCAGG CGATGCGGCG AACATCAAGC AGTCCGGAAT TGCCGACCAG
CAGAAGATCG CCAAGGACAC CGAAGCATTG CTCGGCGACA CCAAGAGTCA GATCCTGATC
ATCACGGCCG GCGTGCTGGT CGTGGGCATG TTGCTCGCAT GGCTGATCGG CCGTGCGATC
TCGCGGCCCA TCGTTCAGAT GTCGGGCGCG ATGAAGGAAC TGGCCGGCGG CAATCTGAAT
GTCGAGGTGG TCGGCTCCGG GCGGCTGGAC GAGATCGGTC TTATGGCGTG CACCGTCGAG
GTCTTCAAGA ACAATGCACT CGAAGTGATC CGGCTGAGGG AAGAGCAAGA GGAAGCCGAG
CGCCGTTCCG CGGCTCAACA CAAGGCCGAG ATGCAGCAGC TTGCCGACGA ATTCGAAGGC
GCCGTCGGTG AGATCATCCA GACCGTGACT TCGGCCTCTA CGGAGCTCGA GGCTTCGGCC
GGCACACTCA CGACGACCGC CGATCGCTCC CAGGAGCTGG CCACGTCGGT GGCGGCGGCG
TCGGAGCAGG CCTCGGCCAA CGTGCAGTCG GTGGCGTCCG CGACCGAGGA GATGGCGTCG
TCGATCTCCG AGATCAGCCG CCAGGTGCAG ACTTCGGCGC GGATCGCGGG TGAGGCTGTC
GATCAAGCCC GCAAAACCAA CGACCGCATC GGTCATCTTG CCGACGCAGC GAACCGAATT
GGCGACGTTG TCGAGTTGAT CAATACGATC GCTGGCCAGA CCAATCTGCT GGCGCTCAAC
GCCACGATCG AGGCGGCCCG CGCCGGCGAC GCCGGTCGCG GCTTCGCGGT CGTGGCACAG
GAGGTCAAGG CGCTCGCCGA GCAGACAGCC AAGGCAACCG GCGAAATCAG CCAGCAGATT
TCCGGAATGC AGGCCGCGAC CCAGGATTCG GTCGGGGCCA TCCGTGAAAT CGGCGGCACC
ATCGAACGGA TGTCGGAGAT CGCCTCGACG ATTGCCTCCG CCGTGGAAGA ACAAGGTGCG
GCCACGCAGG AGATCTCCCG CAACGTGCAG CAGGCCGCGC AAGGTACCCA GCAAGTTTCG
TCGAACATCT GCGATGTTCA GCGGGGCGCC ACTGAGACCG GTTCGGCGTC GAGCCAAGTG
CTGGCGGCGG CGCAATCGCT GTCGCGGGAC AGCAACCGGC TCAAGGACGA GGTCACCCGT
TTCGTGGAGA CGGTGCGGGC GGCGTGA
 
Protein sequence
MTSRTTRNGE PRSPGLFDVF TNRRIGTKVA IGFVLVQVLM VVLAVLNYSS FEHVRQAFVA 
LDQRVQVVGI VRDVDRGFTA FRRFVREYSL TGDEALISEA ESRQNALRQS IAQGLKEIHD
PSRLAKMREI SQAFDAYTTS FADVFRMRRD QSKLIREVLD PTGQQARLKL EQLQAAITAN
DGGETTSLLV AEAVKQLLLL RLDVNKVLGR HDQAAADAAE KALADLKTAM SALKTAIGSS
AGRKQIGEIE VDIKNYANAY QKASRVAHEI EVLVNGTMPK AATAIAGDAA NIKQSGIADQ
QKIAKDTEAL LGDTKSQILI ITAGVLVVGM LLAWLIGRAI SRPIVQMSGA MKELAGGNLN
VEVVGSGRLD EIGLMACTVE VFKNNALEVI RLREEQEEAE RRSAAQHKAE MQQLADEFEG
AVGEIIQTVT SASTELEASA GTLTTTADRS QELATSVAAA SEQASANVQS VASATEEMAS
SISEISRQVQ TSARIAGEAV DQARKTNDRI GHLADAANRI GDVVELINTI AGQTNLLALN
ATIEAARAGD AGRGFAVVAQ EVKALAEQTA KATGEISQQI SGMQAATQDS VGAIREIGGT
IERMSEIAST IASAVEEQGA ATQEISRNVQ QAAQGTQQVS SNICDVQRGA TETGSASSQV
LAAAQSLSRD SNRLKDEVTR FVETVRAA