Gene RPB_2961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2961 
Symbol 
ID3910760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3370786 
End bp3372477 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content64% 
IMG OID637884867 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_486574 
Protein GI86750078 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAAAG CCCTGCTGAA TATCAGAACG TCCTACAAGC TCGCCATCAT CTTCACACTT 
CTCGGTCTCG TCGCGATCGC GTCCAACGTG GTCATCGCCC GAAACCTGTC GGTTCTCGAA
CAGAACAACG AGCGGACGAC GCACACCTAC AAGGTCATCG ACCGCGCCAA GGCGATCGTC
GCCGCGATGG TCGATGGTGA AACCGGCGTG CGTGGATTTC TGGTGAGCGG CGACGACAAA
TTCCTCGAGC CGTATCGAAA CTCGGACAAG GCCTTGAAGA CGGCGTGGAG CGAGATCAAG
ACTCTGACTT CGGACAATCC TGCGCAGCAG AAGCGGCTCG ACCAGATCGA TGCAGCGGCC
TCCGAATGGC GGCAGAAGGT CGCCGAGCGT GAAATTGCTC TGATGAAGAA TCCGCAGACG
GTCAATGAAG CGCGCGGCCT CGAAGCTTCG GGCGCCGGCA AGGCGACGAT GGATGCGATC
CGCTCGCTGG TCGACGAGAT CGTCAAGGCC GAGGCCTCGC TGCTGACGGT GCGTGCCGAA
GCTGCGGCGG CTGCGGCGTC GTCGTCGTTC ACGGCGATCA TTGCGAGCGG CGTGGCCATG
GTCGTGCTGA TTGTTCTCGG CCTGCTGTTT CTCGGCCGCG TCGTCACCCG CGGCATCGTC
GACATGACCT CCGCGATGGG AAAACTGGCG CAGAACGATC TGACGGTCGA TATTCCGCAC
GCCGACCGGC GCGACGAGAT CGGCAAGATG GCGATGGCGG TTCAGGTGTT CAAGGACAAC
GCCATCCGCG TCCGCCAGCT CGAGGCCGAG CAGCAGGAAA GCGACCGGAT CCGCGCCGAG
CAGCGCAAGG CGGAAATGAA CAAGCTCGCT TCGGGCTTCG AAGCGGCCGT CGGCGAGATC
GTCGGCACGG TGTCATCGGC CTCCACCGAG CTCGAGGCAT CCGCACAAAC GCTGACGTCG
TCGGCGGAGC GCGCCCAGCA TCTCAGCTCC ACCGTCGCTG CAGCTTCCGA AGAAGCCTCC
GCCAACGTCC AGTCGGTGGC TTCGGCGACC GAAGAGCTCA GCTCGTCGAT CAGCGAGATC
AGCCGGCAGG TTCAGGAGTC GGCGCGAATC GCGGTCGATG CGGTCAATCA GACGCGCAGC
ACCAACGAGC GGGTGAGCGA ATTGTCCAAG GCCGCGGCGC GGATCGGCGA CATCATCGAA
CTGATCAATA CGATCGCCGG CCAGACCAAT CTGCTGGCGC TCAACGCCAC CATCGAGGCG
GCCCGTGCCG GCGAGGCGGG GCGTGGCTTC GCTGTCGTCG CGTCCGAGGT CAAGGCGCTG
GCGGAACAGA CGGCCAAGGC CACCGGGGAG ATCAGCCAGC AGATCTCCGG CATCCAGTCG
GCGACCGGCG AGTCGGTCGA CGCGATCAAG CAGGTCAGCA TCACCATCGA GCGGCTGTCC
GAGATCGCCT CCACGATCGC CGCGGCGGTC GAGGAGCAGG GCGCCGCGAC GCAGGAGATT
TCGCGCAACG TGCAGCAGGC CGCGCACGGC ACGCAGCAGG TTTCGTCCAA CGTCATCGAC
GTCCAGCGCG GCGCCACGGA GACCGGTTCG GCCTCATCTC AGGTGTTGTC GTCGGCACAA
TTGCTGGCGA AGGACAGCGC CCGGCTGAAG CTGGAAGTGT CGAAATTCGT CGACACGGTG
AGGGCCGCCT GA
 
Protein sequence
MWKALLNIRT SYKLAIIFTL LGLVAIASNV VIARNLSVLE QNNERTTHTY KVIDRAKAIV 
AAMVDGETGV RGFLVSGDDK FLEPYRNSDK ALKTAWSEIK TLTSDNPAQQ KRLDQIDAAA
SEWRQKVAER EIALMKNPQT VNEARGLEAS GAGKATMDAI RSLVDEIVKA EASLLTVRAE
AAAAAASSSF TAIIASGVAM VVLIVLGLLF LGRVVTRGIV DMTSAMGKLA QNDLTVDIPH
ADRRDEIGKM AMAVQVFKDN AIRVRQLEAE QQESDRIRAE QRKAEMNKLA SGFEAAVGEI
VGTVSSASTE LEASAQTLTS SAERAQHLSS TVAAASEEAS ANVQSVASAT EELSSSISEI
SRQVQESARI AVDAVNQTRS TNERVSELSK AAARIGDIIE LINTIAGQTN LLALNATIEA
ARAGEAGRGF AVVASEVKAL AEQTAKATGE ISQQISGIQS ATGESVDAIK QVSITIERLS
EIASTIAAAV EEQGAATQEI SRNVQQAAHG TQQVSSNVID VQRGATETGS ASSQVLSSAQ
LLAKDSARLK LEVSKFVDTV RAA