| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2961 |
|---|
| Symbol | |
|---|
| ID | 3910760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3370786 |
|---|
| End bp | 3372477 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637884867 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_486574 |
|---|
| Protein GI | 86750078 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGAAAG CCCTGCTGAA TATCAGAACG TCCTACAAGC TCGCCATCAT CTTCACACTT
CTCGGTCTCG TCGCGATCGC GTCCAACGTG GTCATCGCCC GAAACCTGTC GGTTCTCGAA
CAGAACAACG AGCGGACGAC GCACACCTAC AAGGTCATCG ACCGCGCCAA GGCGATCGTC
GCCGCGATGG TCGATGGTGA AACCGGCGTG CGTGGATTTC TGGTGAGCGG CGACGACAAA
TTCCTCGAGC CGTATCGAAA CTCGGACAAG GCCTTGAAGA CGGCGTGGAG CGAGATCAAG
ACTCTGACTT CGGACAATCC TGCGCAGCAG AAGCGGCTCG ACCAGATCGA TGCAGCGGCC
TCCGAATGGC GGCAGAAGGT CGCCGAGCGT GAAATTGCTC TGATGAAGAA TCCGCAGACG
GTCAATGAAG CGCGCGGCCT CGAAGCTTCG GGCGCCGGCA AGGCGACGAT GGATGCGATC
CGCTCGCTGG TCGACGAGAT CGTCAAGGCC GAGGCCTCGC TGCTGACGGT GCGTGCCGAA
GCTGCGGCGG CTGCGGCGTC GTCGTCGTTC ACGGCGATCA TTGCGAGCGG CGTGGCCATG
GTCGTGCTGA TTGTTCTCGG CCTGCTGTTT CTCGGCCGCG TCGTCACCCG CGGCATCGTC
GACATGACCT CCGCGATGGG AAAACTGGCG CAGAACGATC TGACGGTCGA TATTCCGCAC
GCCGACCGGC GCGACGAGAT CGGCAAGATG GCGATGGCGG TTCAGGTGTT CAAGGACAAC
GCCATCCGCG TCCGCCAGCT CGAGGCCGAG CAGCAGGAAA GCGACCGGAT CCGCGCCGAG
CAGCGCAAGG CGGAAATGAA CAAGCTCGCT TCGGGCTTCG AAGCGGCCGT CGGCGAGATC
GTCGGCACGG TGTCATCGGC CTCCACCGAG CTCGAGGCAT CCGCACAAAC GCTGACGTCG
TCGGCGGAGC GCGCCCAGCA TCTCAGCTCC ACCGTCGCTG CAGCTTCCGA AGAAGCCTCC
GCCAACGTCC AGTCGGTGGC TTCGGCGACC GAAGAGCTCA GCTCGTCGAT CAGCGAGATC
AGCCGGCAGG TTCAGGAGTC GGCGCGAATC GCGGTCGATG CGGTCAATCA GACGCGCAGC
ACCAACGAGC GGGTGAGCGA ATTGTCCAAG GCCGCGGCGC GGATCGGCGA CATCATCGAA
CTGATCAATA CGATCGCCGG CCAGACCAAT CTGCTGGCGC TCAACGCCAC CATCGAGGCG
GCCCGTGCCG GCGAGGCGGG GCGTGGCTTC GCTGTCGTCG CGTCCGAGGT CAAGGCGCTG
GCGGAACAGA CGGCCAAGGC CACCGGGGAG ATCAGCCAGC AGATCTCCGG CATCCAGTCG
GCGACCGGCG AGTCGGTCGA CGCGATCAAG CAGGTCAGCA TCACCATCGA GCGGCTGTCC
GAGATCGCCT CCACGATCGC CGCGGCGGTC GAGGAGCAGG GCGCCGCGAC GCAGGAGATT
TCGCGCAACG TGCAGCAGGC CGCGCACGGC ACGCAGCAGG TTTCGTCCAA CGTCATCGAC
GTCCAGCGCG GCGCCACGGA GACCGGTTCG GCCTCATCTC AGGTGTTGTC GTCGGCACAA
TTGCTGGCGA AGGACAGCGC CCGGCTGAAG CTGGAAGTGT CGAAATTCGT CGACACGGTG
AGGGCCGCCT GA
|
|---|
| Protein sequence | MWKALLNIRT SYKLAIIFTL LGLVAIASNV VIARNLSVLE QNNERTTHTY KVIDRAKAIV
AAMVDGETGV RGFLVSGDDK FLEPYRNSDK ALKTAWSEIK TLTSDNPAQQ KRLDQIDAAA
SEWRQKVAER EIALMKNPQT VNEARGLEAS GAGKATMDAI RSLVDEIVKA EASLLTVRAE
AAAAAASSSF TAIIASGVAM VVLIVLGLLF LGRVVTRGIV DMTSAMGKLA QNDLTVDIPH
ADRRDEIGKM AMAVQVFKDN AIRVRQLEAE QQESDRIRAE QRKAEMNKLA SGFEAAVGEI
VGTVSSASTE LEASAQTLTS SAERAQHLSS TVAAASEEAS ANVQSVASAT EELSSSISEI
SRQVQESARI AVDAVNQTRS TNERVSELSK AAARIGDIIE LINTIAGQTN LLALNATIEA
ARAGEAGRGF AVVASEVKAL AEQTAKATGE ISQQISGIQS ATGESVDAIK QVSITIERLS
EIASTIAAAV EEQGAATQEI SRNVQQAAHG TQQVSSNVID VQRGATETGS ASSQVLSSAQ
LLAKDSARLK LEVSKFVDTV RAA
|
|---|
| |