| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4580 |
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| Symbol | |
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| ID | 3971879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5112093 |
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| End bp | 5113784 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927691 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_534421 |
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| Protein GI | 90426051 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.174371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACAA ACCTATCCAT CCGCGCCAAG ATCACGATCG TGGTCTCGTT CTTGCTGATC
ACCTCGACGG CGATGGGCAT TCTCGCCGTC ATGAAGATGA GTTCGATCAA CGCCAGCACC
GTGGAGATCC AGAGCGTCTG GCTGCCGAGC GTGCGCGCGC TCGGTGACCT GCGCGCCGCC
GCCGCCAGCT ATCGTGGCAT CGTGCGACTG CACGTCTTGA GCGAAACGAT TGAGACCAAG
GCCGCCGCGG CGAAGCGACT GGAGGCCGCC TCGAAGGCGA TGACGGACAT TCGCGAGAAT
TATCTGAAGT TGATCCAGGC GGAGGACGAG CGCACGCTGT TCAAGAACTG GACGCAACAA
TGGAATAACT ACGAAGACGC CGTGCAGCAG GTGCTGGTGC TGTCGCGCGA GGGCGCCGGC
CGGGTGCCGC ACGAGGCGTT CGAATTCAAC GAGACCAAAG CCTACCCGAT CGGCAAGACC
GCAGATCTGA CCCTGGATCG CGCGATCAAC ATCAACAAAG GCGCGGCGGA TGCCGCCGGG
GTCTCCAGCG CCGAACATTT CAACGCGGCG TTTTTGCTCA TCGCGGCGAT CTTGGCAGGC
TCGGCGGCGA TCGGGATCGG CCTGGCGATC TATCTGGTGC GCAGCGTGTC GAGCGGGATC
GGCTCGATCG TCTCGCCGAT GCAGGCGCTG GGCAAGGGTG ACCTCGGTGT GATGGTGCCG
CATCAGGGCG AGCGCACCGA GATCGGCGTG ATGGCCGACA CCTTGCAGGT GTTCAAGCAG
GCGCTGATCG ACAAGCAGGC AACCGACGAG GCGGCGGCGC GCGAGGCCGA AGCCAAGATT
CTGCGCGGCC AGCGGGTCGA CAGCATCACC CGGGATTTCG AGGCGATGAT CGGCGAGATC
GTCGAGACGG TGTCGTCGGC CTCCACCGAG CTGGAAGCCT CGGCGAGCAC GCTGACCTCG
GCGGCCGAGC GCGCGCATCA ACTGACCAAC ACCGTCGCGG CGGCGTCGGG CGAAGCGTCC
AGCAACGTGC AATCGGTGGC CTCGGCCACC GAGGAATTGA GCTCCTCGGT CAACGAGATC
GGCCGTCAGG TGCAGGACTC GGCACGGATC GCCAACGCCG CCGTTAACCA GGCGCAAAAG
ACCAATCATC GCGTCGGAGA GCTGGCCAAG GCCGCAGCCC GGATCGGCGA CGTTGTCGAA
CTGATCAACA CCATCGCCGG ACAGACCAAT CTGTTGGCGC TGAACGCCAC CATCGAAGCC
GCCCGCGCCG GCGACGCCGG CCGTGGCTTC GCGGTGGTGG CCTCGGAAGT GAAGGCTTTG
GCCGAACAGA CCGGCAAGGC GACCGGCGAG ATCAGCCAGC AGATCAACGG CATTCAGATC
GCCACCCAGG AGTCGGTCGA CGCCATCAAG GAGATCGGCG AAACCATCGG GCAGATGGCG
GAGATCGCAT CGACGATCGC CTCGGCGGTG GAGCAGCAGG GCGCGGCCAC CCAGGAAATC
TCCCGCAACG TTCAGCAGGC CGCGCGCGGC ACCGAGCAGG TGAGTGCCAA TATCGGGCAA
GTGCAGCGCG GCGCCAGCGA AACCGGTTCG GCCTCCTCAC AAGTGCTGTC GGCGGCGCAG
TCGCTGTCGC ACGACAGCAC CAGGCTGAAG GACGAGGTCG GCAAATTCCT GACCTCGGTG
CGGAGCGCCT GA
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| Protein sequence | MLTNLSIRAK ITIVVSFLLI TSTAMGILAV MKMSSINAST VEIQSVWLPS VRALGDLRAA
AASYRGIVRL HVLSETIETK AAAAKRLEAA SKAMTDIREN YLKLIQAEDE RTLFKNWTQQ
WNNYEDAVQQ VLVLSREGAG RVPHEAFEFN ETKAYPIGKT ADLTLDRAIN INKGAADAAG
VSSAEHFNAA FLLIAAILAG SAAIGIGLAI YLVRSVSSGI GSIVSPMQAL GKGDLGVMVP
HQGERTEIGV MADTLQVFKQ ALIDKQATDE AAAREAEAKI LRGQRVDSIT RDFEAMIGEI
VETVSSASTE LEASASTLTS AAERAHQLTN TVAAASGEAS SNVQSVASAT EELSSSVNEI
GRQVQDSARI ANAAVNQAQK TNHRVGELAK AAARIGDVVE LINTIAGQTN LLALNATIEA
ARAGDAGRGF AVVASEVKAL AEQTGKATGE ISQQINGIQI ATQESVDAIK EIGETIGQMA
EIASTIASAV EQQGAATQEI SRNVQQAARG TEQVSANIGQ VQRGASETGS ASSQVLSAAQ
SLSHDSTRLK DEVGKFLTSV RSA
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