Gene RPC_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3804 
Symbol 
ID3969224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4231752 
End bp4233719 
Gene Length1968 bp 
Protein Length655 aa 
Translation table11 
GC content64% 
IMG OID637926914 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_533657 
Protein GI90425287 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.772812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGCT TGCGCCTTAC TTACAAGATC AACGCGATCG CCGCGCTCGG CATCGCCGGG 
CTGTTGCTGT TGGGGGCCCT TTACCTTTTC GGTGACGCCA AGCAGGACGT GTTTCGTAAG
GCGGACGACA GCGCCAGGTC GCTGGACGTG CTGCAGAACA AGGTGCTGGT CACGATTCTG
CGGATGCGGC GCGCCGAAAA GGATTTCCTG CTTCGTAAGG ACGAAAAATA CCTGCAGGAA
CACCTGCAAA TGAGCAAAGA GGTGTCCGTC GATCTGGATG ACATGCGGCG GCAGGCGACC
GCGCTCGGCC GGAGCGATCT GGTGCAGAAG CTCGATACGA TTCAGACCGG GACCACGGAC
TACAGCGCAC ACTTCGCGGC GCTGACGGTC GCGCGCATCA AGCTCGGCCT CAAGGAGGAC
AAGGGTCTCG AAGGCAGCCT GCGGGGGTCG GTGCACGCCA TTGAAACCGC GCTCAAGGCT
TTCGATAAGC CGGCGCTGGC GGTGACCATG CTGATGATGC GCAGACATGA AAAGGATTTC
ATGCTGCGCG GCGAAGCGAA ATCCGGCGAC GACATGAAGA AGCGCGCGGC GGAGTTCTCC
GCCCAGCTGG CTCAATCCGA CATTCCGGCC GACGCCCAGG CCGACCTGAC CCGCAAACTC
GAAGCCTATC AGCGCGATTT CTTCGCCTGG ATCGAGGCGG CTCAACTCGT CGCCAAAGAG
CAGAGTGCGA TTTCCGCCCG CTTCGCTGCC ATCGAGCCGG TGATTTTGGC GGTCGAACAA
TCCGTCAAGC AGAGCAGCGA AAGCGCGCAG GCTGCCGAAT TGAAAGCCCG CGACGAGACC
AAGGGGCTGA TGCAGGCCGG CATCGCCGCA ATCGTCGTGG CGGTCGGCCT GATGGGCTTC
TTGATCGGCC GCTCGGTGTC GCGGCCGTTG TCGGCGATGA CGCGGGCGAT GCTCGAATTG
GCCAACGGCA ATTTCGCGAT CGTGCTCCCC GGGCTCGGCC GCAAGGACGA GATCGGCGAG
ATCGCCCAGG CGGTCGAGAC CTTCAAGGTC AAAGCCGAGC AGAAGGCCCG CGACGAGGCC
GAGGCCAAGG CCCGGCAGGA CCGTTTGGTG GCCGAGTTGC GCAAGAAAGA CATGTACAAG
CTCGCCGACG ACTTCGAAGC CGCGGTCGGC GAAATCGTCC ACACCGTGTC CTCGGCCTCG
ACCGAACTCG AGGCTTCGGC GACCACGTTG ACGGCGACGG CGGTGCGCTC CCGAGAGCTG
GCGACGCTGG TCGCCGCGGC CTCGGAAGAA GCCTCGACCA ATGTTCAATC CGTGGCCTCG
GCCACCGAGG AGATGTCGTC CTCGGTCAAC GAGATCAGCC GCCAGGTGCA GAATTCGTCG
CGGATCGCAT CCGAGGCGGT GGATCAGGCC CGCAGCACCA ACGACCGGGT CGGCGAACTA
TCCCAGGCCG CGGCGCGGAT CGGCGACGTC GTCGAACTGA TCAACACCAT CGCCGGACAG
ACCAACCTGT TGGCGCTGAA TGCCACCATC GAGGCCGCCC GTGCGGGGGA CGCCGGCCGC
GGTTTCGCCG TGGTGGCGTC CGAGGTGAAG GCGTTGGCCG AGCAGACCGC CAAAGCCACC
GGCGAGATCA GCCAGCAGAT CAACGGAATT CAGAATGCGA CCCACGGTTC GGTCGCGGCG
ATCCGGGAGA TCGGCGTCAC CATCGGGCAG ATGTCGGAAA TATCCGCGAC CATCGCTTCG
GCGGTGGAAG AACAGGGCGC GGCGACGCAA GAAATTTCCC GCAACGTGCA GCAAGCCGCG
GAGGGGACGA TGCAGGTGTC GTCCAACATC AGCGACGTGC AACGTGGCGC CAGCGAGACC
GGCGCGGCTT CGGCTCAGGT GCTGTCGGCG GCGCAATCGT TGTCGCGCGA CAGCAGCCGG
CTCAAGGACG AGGTCAGCAA ATTCCTCAAC ACGGTGCGGG CCGCTTGA
 
Protein sequence
MFSLRLTYKI NAIAALGIAG LLLLGALYLF GDAKQDVFRK ADDSARSLDV LQNKVLVTIL 
RMRRAEKDFL LRKDEKYLQE HLQMSKEVSV DLDDMRRQAT ALGRSDLVQK LDTIQTGTTD
YSAHFAALTV ARIKLGLKED KGLEGSLRGS VHAIETALKA FDKPALAVTM LMMRRHEKDF
MLRGEAKSGD DMKKRAAEFS AQLAQSDIPA DAQADLTRKL EAYQRDFFAW IEAAQLVAKE
QSAISARFAA IEPVILAVEQ SVKQSSESAQ AAELKARDET KGLMQAGIAA IVVAVGLMGF
LIGRSVSRPL SAMTRAMLEL ANGNFAIVLP GLGRKDEIGE IAQAVETFKV KAEQKARDEA
EAKARQDRLV AELRKKDMYK LADDFEAAVG EIVHTVSSAS TELEASATTL TATAVRSREL
ATLVAAASEE ASTNVQSVAS ATEEMSSSVN EISRQVQNSS RIASEAVDQA RSTNDRVGEL
SQAAARIGDV VELINTIAGQ TNLLALNATI EAARAGDAGR GFAVVASEVK ALAEQTAKAT
GEISQQINGI QNATHGSVAA IREIGVTIGQ MSEISATIAS AVEEQGAATQ EISRNVQQAA
EGTMQVSSNI SDVQRGASET GAASAQVLSA AQSLSRDSSR LKDEVSKFLN TVRAA