Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3804 |
Symbol | |
ID | 3969224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4231752 |
End bp | 4233719 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637926914 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_533657 |
Protein GI | 90425287 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.772812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGCT TGCGCCTTAC TTACAAGATC AACGCGATCG CCGCGCTCGG CATCGCCGGG CTGTTGCTGT TGGGGGCCCT TTACCTTTTC GGTGACGCCA AGCAGGACGT GTTTCGTAAG GCGGACGACA GCGCCAGGTC GCTGGACGTG CTGCAGAACA AGGTGCTGGT CACGATTCTG CGGATGCGGC GCGCCGAAAA GGATTTCCTG CTTCGTAAGG ACGAAAAATA CCTGCAGGAA CACCTGCAAA TGAGCAAAGA GGTGTCCGTC GATCTGGATG ACATGCGGCG GCAGGCGACC GCGCTCGGCC GGAGCGATCT GGTGCAGAAG CTCGATACGA TTCAGACCGG GACCACGGAC TACAGCGCAC ACTTCGCGGC GCTGACGGTC GCGCGCATCA AGCTCGGCCT CAAGGAGGAC AAGGGTCTCG AAGGCAGCCT GCGGGGGTCG GTGCACGCCA TTGAAACCGC GCTCAAGGCT TTCGATAAGC CGGCGCTGGC GGTGACCATG CTGATGATGC GCAGACATGA AAAGGATTTC ATGCTGCGCG GCGAAGCGAA ATCCGGCGAC GACATGAAGA AGCGCGCGGC GGAGTTCTCC GCCCAGCTGG CTCAATCCGA CATTCCGGCC GACGCCCAGG CCGACCTGAC CCGCAAACTC GAAGCCTATC AGCGCGATTT CTTCGCCTGG ATCGAGGCGG CTCAACTCGT CGCCAAAGAG CAGAGTGCGA TTTCCGCCCG CTTCGCTGCC ATCGAGCCGG TGATTTTGGC GGTCGAACAA TCCGTCAAGC AGAGCAGCGA AAGCGCGCAG GCTGCCGAAT TGAAAGCCCG CGACGAGACC AAGGGGCTGA TGCAGGCCGG CATCGCCGCA ATCGTCGTGG CGGTCGGCCT GATGGGCTTC TTGATCGGCC GCTCGGTGTC GCGGCCGTTG TCGGCGATGA CGCGGGCGAT GCTCGAATTG GCCAACGGCA ATTTCGCGAT CGTGCTCCCC GGGCTCGGCC GCAAGGACGA GATCGGCGAG ATCGCCCAGG CGGTCGAGAC CTTCAAGGTC AAAGCCGAGC AGAAGGCCCG CGACGAGGCC GAGGCCAAGG CCCGGCAGGA CCGTTTGGTG GCCGAGTTGC GCAAGAAAGA CATGTACAAG CTCGCCGACG ACTTCGAAGC CGCGGTCGGC GAAATCGTCC ACACCGTGTC CTCGGCCTCG ACCGAACTCG AGGCTTCGGC GACCACGTTG ACGGCGACGG CGGTGCGCTC CCGAGAGCTG GCGACGCTGG TCGCCGCGGC CTCGGAAGAA GCCTCGACCA ATGTTCAATC CGTGGCCTCG GCCACCGAGG AGATGTCGTC CTCGGTCAAC GAGATCAGCC GCCAGGTGCA GAATTCGTCG CGGATCGCAT CCGAGGCGGT GGATCAGGCC CGCAGCACCA ACGACCGGGT CGGCGAACTA TCCCAGGCCG CGGCGCGGAT CGGCGACGTC GTCGAACTGA TCAACACCAT CGCCGGACAG ACCAACCTGT TGGCGCTGAA TGCCACCATC GAGGCCGCCC GTGCGGGGGA CGCCGGCCGC GGTTTCGCCG TGGTGGCGTC CGAGGTGAAG GCGTTGGCCG AGCAGACCGC CAAAGCCACC GGCGAGATCA GCCAGCAGAT CAACGGAATT CAGAATGCGA CCCACGGTTC GGTCGCGGCG ATCCGGGAGA TCGGCGTCAC CATCGGGCAG ATGTCGGAAA TATCCGCGAC CATCGCTTCG GCGGTGGAAG AACAGGGCGC GGCGACGCAA GAAATTTCCC GCAACGTGCA GCAAGCCGCG GAGGGGACGA TGCAGGTGTC GTCCAACATC AGCGACGTGC AACGTGGCGC CAGCGAGACC GGCGCGGCTT CGGCTCAGGT GCTGTCGGCG GCGCAATCGT TGTCGCGCGA CAGCAGCCGG CTCAAGGACG AGGTCAGCAA ATTCCTCAAC ACGGTGCGGG CCGCTTGA
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Protein sequence | MFSLRLTYKI NAIAALGIAG LLLLGALYLF GDAKQDVFRK ADDSARSLDV LQNKVLVTIL RMRRAEKDFL LRKDEKYLQE HLQMSKEVSV DLDDMRRQAT ALGRSDLVQK LDTIQTGTTD YSAHFAALTV ARIKLGLKED KGLEGSLRGS VHAIETALKA FDKPALAVTM LMMRRHEKDF MLRGEAKSGD DMKKRAAEFS AQLAQSDIPA DAQADLTRKL EAYQRDFFAW IEAAQLVAKE QSAISARFAA IEPVILAVEQ SVKQSSESAQ AAELKARDET KGLMQAGIAA IVVAVGLMGF LIGRSVSRPL SAMTRAMLEL ANGNFAIVLP GLGRKDEIGE IAQAVETFKV KAEQKARDEA EAKARQDRLV AELRKKDMYK LADDFEAAVG EIVHTVSSAS TELEASATTL TATAVRSREL ATLVAAASEE ASTNVQSVAS ATEEMSSSVN EISRQVQNSS RIASEAVDQA RSTNDRVGEL SQAAARIGDV VELINTIAGQ TNLLALNATI EAARAGDAGR GFAVVASEVK ALAEQTAKAT GEISQQINGI QNATHGSVAA IREIGVTIGQ MSEISATIAS AVEEQGAATQ EISRNVQQAA EGTMQVSSNI SDVQRGASET GAASAQVLSA AQSLSRDSSR LKDEVSKFLN TVRAA
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