More than 300 homologs were found in PanDaTox collection
for query gene RPB_4286 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  62.77 
 
 
563 aa  638    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  65.36 
 
 
563 aa  647    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  100 
 
 
563 aa  1112    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  64.65 
 
 
563 aa  694    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  67.85 
 
 
563 aa  727    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  68.38 
 
 
563 aa  719    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  76.73 
 
 
563 aa  772    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  62.88 
 
 
563 aa  647    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  66.07 
 
 
563 aa  697    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  59.89 
 
 
561 aa  628  1e-178  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_007958  RPD_0336  chemotaxis sensory transducer  62.88 
 
 
563 aa  625  1e-178  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0489  methyl-accepting chemotaxis sensory transducer  62.77 
 
 
564 aa  623  1e-177  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.301128  normal 
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  61.1 
 
 
563 aa  623  1e-177  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  62.92 
 
 
562 aa  611  9.999999999999999e-175  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  59.86 
 
 
563 aa  602  1.0000000000000001e-171  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2902  methyl-accepting chemotaxis sensory transducer  61.81 
 
 
563 aa  600  1e-170  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.32606  normal  0.0943242 
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  57.37 
 
 
561 aa  540  9.999999999999999e-153  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  53.98 
 
 
562 aa  513  1e-144  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  51.69 
 
 
560 aa  461  9.999999999999999e-129  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  50.35 
 
 
566 aa  433  1e-120  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  66.4 
 
 
688 aa  432  1e-120  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  67.29 
 
 
688 aa  429  1e-119  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  55.64 
 
 
688 aa  431  1e-119  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  65.05 
 
 
689 aa  425  1e-117  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  47.5 
 
 
566 aa  422  1e-117  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  48.81 
 
 
561 aa  420  1e-116  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  61.08 
 
 
567 aa  421  1e-116  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  70.4 
 
 
691 aa  416  9.999999999999999e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  65.07 
 
 
688 aa  416  9.999999999999999e-116  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  62.22 
 
 
561 aa  416  9.999999999999999e-116  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  72.45 
 
 
731 aa  412  1e-114  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  49.58 
 
 
561 aa  414  1e-114  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  64.78 
 
 
565 aa  409  1e-113  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  65 
 
 
673 aa  410  1e-113  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  55.27 
 
 
568 aa  411  1e-113  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  66 
 
 
674 aa  407  1.0000000000000001e-112  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  63.93 
 
 
672 aa  407  1.0000000000000001e-112  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  65.34 
 
 
563 aa  407  1.0000000000000001e-112  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  64.38 
 
 
561 aa  406  1.0000000000000001e-112  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  66.31 
 
 
655 aa  406  1.0000000000000001e-112  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  63 
 
 
542 aa  403  1e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  62.67 
 
 
565 aa  405  1e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  52.59 
 
 
670 aa  405  1e-111  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2799  putative receptor/sensory transducer  69.16 
 
 
707 aa  402  1e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0655652  normal 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  62.9 
 
 
674 aa  402  1e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  48.17 
 
 
566 aa  401  9.999999999999999e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  62.63 
 
 
691 aa  401  9.999999999999999e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  63.46 
 
 
573 aa  399  9.999999999999999e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  64.67 
 
 
568 aa  399  9.999999999999999e-111  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  63.16 
 
 
602 aa  396  1e-109  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  48.45 
 
 
577 aa  397  1e-109  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  56.64 
 
 
675 aa  393  1e-108  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  65.55 
 
 
587 aa  395  1e-108  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_007925  RPC_4101  methyl-accepting chemotaxis sensory transducer  66.57 
 
 
698 aa  394  1e-108  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2903  methyl-accepting chemotaxis sensory transducer  50.78 
 
 
568 aa  390  1e-107  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335645  normal  0.0996392 
 
 
-
 
NC_007778  RPB_2961  methyl-accepting chemotaxis sensory transducer  65.84 
 
 
563 aa  390  1e-107  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  64.76 
 
 
572 aa  390  1e-107  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  61.36 
 
 
656 aa  391  1e-107  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  62.2 
 
 
741 aa  388  1e-106  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_009485  BBta_1388  methyl-accepting chemotaxis sensory transducer  61.46 
 
 
656 aa  386  1e-106  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0527529  normal  0.207734 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  63.74 
 
 
730 aa  385  1e-106  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  65.87 
 
 
691 aa  387  1e-106  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  57.11 
 
 
716 aa  385  1e-106  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  62.86 
 
 
656 aa  388  1e-106  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  60.53 
 
 
656 aa  380  1e-104  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  56.88 
 
 
714 aa  377  1e-103  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  47.99 
 
 
556 aa  373  1e-102  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  46.72 
 
 
564 aa  374  1e-102  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  62.23 
 
 
563 aa  374  1e-102  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  59.27 
 
 
567 aa  370  1e-101  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  61.82 
 
 
552 aa  369  1e-101  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  60 
 
 
730 aa  369  1e-101  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  62.15 
 
 
561 aa  366  1e-100  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
562 aa  361  2e-98  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  42.96 
 
 
562 aa  360  4e-98  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_007925  RPC_1253  methyl-accepting chemotaxis sensory transducer  62.7 
 
 
567 aa  358  9.999999999999999e-98  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.010155 
 
 
-
 
NC_010725  Mpop_2047  methyl-accepting chemotaxis sensory transducer  45.99 
 
 
562 aa  358  1.9999999999999998e-97  Methylobacterium populi BJ001  Bacteria  normal  normal  0.759486 
 
 
-
 
NC_010511  M446_2544  methyl-accepting chemotaxis sensory transducer  43.87 
 
 
566 aa  356  6.999999999999999e-97  Methylobacterium sp. 4-46  Bacteria  normal  0.476321  normal 
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  63.82 
 
 
716 aa  353  4e-96  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_010505  Mrad2831_0252  methyl-accepting chemotaxis sensory transducer  46.03 
 
 
562 aa  349  6e-95  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  59.19 
 
 
675 aa  345  1e-93  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  67.49 
 
 
428 aa  341  2e-92  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_007406  Nwi_0530  methyl-accepting chemotaxis protein  66.43 
 
 
569 aa  338  1.9999999999999998e-91  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.667624  normal 
 
 
-
 
NC_011894  Mnod_5243  methyl-accepting chemotaxis sensory transducer  45.29 
 
 
562 aa  337  2.9999999999999997e-91  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  66.08 
 
 
564 aa  337  2.9999999999999997e-91  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2457  methyl-accepting chemotaxis sensory transducer  54.74 
 
 
665 aa  334  2e-90  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0375918  normal  0.509707 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  40.81 
 
 
561 aa  333  5e-90  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  40.63 
 
 
561 aa  333  5e-90  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_007958  RPD_3581  methyl-accepting chemotaxis sensory transducer  42.61 
 
 
567 aa  329  7e-89  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0981346  normal  0.985512 
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  53.78 
 
 
567 aa  329  7e-89  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  52.94 
 
 
689 aa  328  1.0000000000000001e-88  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_007778  RPB_1030  methyl-accepting chemotaxis sensory transducer  54.66 
 
 
653 aa  327  4.0000000000000003e-88  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0061  methyl-accepting chemotaxis sensory transducer  49.77 
 
 
674 aa  325  2e-87  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1709  methyl-accepting chemotaxis sensory transducer  52.28 
 
 
568 aa  324  2e-87  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.55655  normal  0.12205 
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  55.59 
 
 
698 aa  324  3e-87  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_007406  Nwi_2996  methyl-accepting chemotaxis protein  50.12 
 
 
698 aa  323  4e-87  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  54.06 
 
 
667 aa  322  9.999999999999999e-87  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_010725  Mpop_2242  methyl-accepting chemotaxis sensory transducer  44.74 
 
 
562 aa  321  1.9999999999999998e-86  Methylobacterium populi BJ001  Bacteria  normal  0.0448901  normal  0.213644 
 
 
-
 
NC_011004  Rpal_0233  methyl-accepting chemotaxis sensory transducer  45.44 
 
 
563 aa  320  3.9999999999999996e-86  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  53.56 
 
 
681 aa  318  1e-85  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
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