Gene Mpop_2242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2242 
Symbol 
ID6309852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2394188 
End bp2395876 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content70% 
IMG OID642650967 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001924939 
Protein GI188581494 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0448901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.213644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCTCC AGAATCTTCC CATCCGCAGC AAGCTGATCG CTTCATTCGC TCTGCTGACT 
GTTCTTCTCG TCGCCCTGGG CGTGCTCGGT CTGGCCGGAA CCCAGACGAT GCGCGATCAG
GCGCTCGACA TCGAGCGCAA CTGGCTCCCG AGCGTCCGGC TGCTCGGCGA GATCGACACC
GCGGCGGCGC GAATGAACGG CGTGATGCTG CGGCACACGC AGGCGGCCGA CCCGCAGACG
ATCCCGCAGT TGGACCGGGA TTTCGAGCGT TTCGGCAAGC TGGTCGCCGA CAAGCGAGCG
GCCTACGAAC CCCTCATCGC CAATGCCGAG GAGCGGGCGC TCTATGAAAT CTACACGCGG
GAAGCCGCCA CCTTCGAGGC GGAGCGGCGG ATCGTGATGG ATCTTTCGCA CCAAGGAAGG
AAAGCGGAGG CCTTCGCCTA CTACGAAACG AAGGGTCTCG CCCCGCGCCG GGCGATGTCG
AACGCCCTCG AGAAGCTGAT CGCCTTCAAC AACGAGGGCG CCGCCCGGGC GATGGCAGAG
GGCGAGGTCA TGTTCCAACG GGTGCGTGCC ATCGGCCTCG CCGTCCTTGC CCTTGGGCTC
GCCCTGGCTG TTCTGCTCGC CGTGCTGATC ACCCGCGGCG TGACGCGCGG CATCGCTTCC
GTCGTCGGCC CGATGCAGGC CTTGGCCGCC GGCGACCTCT CGGTCACGAT CCCGCATCAG
GGCCGGCGCA CCGAGATCGG GACGATCGCC GACGCGGTGC AGATCTTCAA GGACGGACTG
ATCCGCATGC GCAGCCTCGA ACAGGAGAGC GCAGCGGCCC GCGCCGGCGC GGAGGCGCAG
CGCAAGGCGG CGATGCGCGA GATGGCCGAC CGGTTCGAGG GCGCGGTCGG CGGTGTCGTC
AGCCTCGTCT CATCCGCTGC GGCCCAGTTG CAGGCCTCGG CCCACGGCAT GACCGGTGCC
GCGACCCGCA CCGCCGGCCA GTCGGTCAGC GTGGCCGGCG CCGCCGAGGA GGCCGCGACC
AACGTCAACA CGGTGGCGGC GGCGGCCGAG GAACTCGGCG CCTCGGTGCA GGAGATCAGC
CGGCAGGTCA GCGGCTCGTC GAACCTCGCC CAGGCCGCGG TGGGAGAGGC AACGCAGACG
GAGGCCCATG TCCGGGCTCT GAGCGCAGCC GTCTCCAAGA TCGGCGACGT CGTCACCATG
ATCACGACCA TTGCCGGCCA GACGAACCTG CTGGCGCTCA ACGCCACGAT CGAGGCGGCC
CGCGCCGGCG AGGCCGGTCG GGGCTTCGCG GTGGTGGCCG CCGAGGTCAA GGAACTCGCC
AACCAGACGG CGCGCGCGAC CGAGGAGATC TCGAGTCAGA TCGGCCGCAT CCAGGAAACC
ACGGGTCACG CCGTCACGGC CATCGGCAGC ATCACCGGAC GAATCGAGGA GATCAGCGCG
GTGGCGGCCT CGATCGCGGC AGCCGTGGAG CAGCAGGGCG CGGCGACGCA GGAGATCGTG
CGCAACGTCG CCCAGGCGGC CCTGGGCGCG GGAGAGGTGA CGAGCAACAT CGCCGGGGTG
GCGCAGGCCG CCGAGGAGGC GGGGGCGACC GCCGCCGAGG TGCTCGCCGC CTCCTCGGCG
CTGTCGCGCC AGTCCGAGCA TCTCAACAGC GAAGTGGGCC GCTTCCTGGC GAATGTGCGC
GCCGCCTGA
 
Protein sequence
MSLQNLPIRS KLIASFALLT VLLVALGVLG LAGTQTMRDQ ALDIERNWLP SVRLLGEIDT 
AAARMNGVML RHTQAADPQT IPQLDRDFER FGKLVADKRA AYEPLIANAE ERALYEIYTR
EAATFEAERR IVMDLSHQGR KAEAFAYYET KGLAPRRAMS NALEKLIAFN NEGAARAMAE
GEVMFQRVRA IGLAVLALGL ALAVLLAVLI TRGVTRGIAS VVGPMQALAA GDLSVTIPHQ
GRRTEIGTIA DAVQIFKDGL IRMRSLEQES AAARAGAEAQ RKAAMREMAD RFEGAVGGVV
SLVSSAAAQL QASAHGMTGA ATRTAGQSVS VAGAAEEAAT NVNTVAAAAE ELGASVQEIS
RQVSGSSNLA QAAVGEATQT EAHVRALSAA VSKIGDVVTM ITTIAGQTNL LALNATIEAA
RAGEAGRGFA VVAAEVKELA NQTARATEEI SSQIGRIQET TGHAVTAIGS ITGRIEEISA
VAASIAAAVE QQGAATQEIV RNVAQAALGA GEVTSNIAGV AQAAEEAGAT AAEVLAASSA
LSRQSEHLNS EVGRFLANVR AA