Gene Mpop_0581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0581 
Symbol 
ID6312999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp627437 
End bp629125 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content67% 
IMG OID642649289 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001923294 
Protein GI188579849 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0281709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00474558 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCCTAC ACAGCCTATC TATTAAGTCA AAGCTCATTT CAGCCTTCAC GGCCATGGTT 
CTTTGCCTCA TCGTCGTGTC GGCCATTGCG ATGACCAGCA TCAACAACCT CAGCAACGAG
AACGAGCATC TCGGGCAAAA TAGCATTCCC AGCATCCGTT ATGCTGGCGA ATTGCGCGGC
AACGTGATCG ATGTTCGCGT GAGTGTTATC AACCACCTCC TCTATCAGGA ATTGGAGCGC
ATGCAGGCCG AGGAGAAGTC CCTGGAAGCG AAGACGGCGG CTGTCGCGAA AGCGATGCGG
GGGTACGAGC CGCTCATCAG CCTGTCCGGC GAGCAGGAAC TGTTCGATCG GTTCAAGACG
GAATGGGCAG CCTATCTCGA AGCCGTCCAG GGCGTGCTCG CGCATTCGCG CAACGGCCGC
AAGGATCTCG CGCAGGACGA GAGCGCGCGG AACGTCCGCC CGCGGATCAA GGTCGCGGCC
CAGGCGCTCG ACGACATCAT CGTCCTGAAC AACAAGGCCG GCGAGATCGT CGTCGCCCGC
TCGGACGCGA GTGCGCGCTC GGCCAAGAAT CTGATGCTCG CCATCGGTTG CGGCGCGATT
CTTCTGGCCA TCGCCCTGGC CACCCTCATC GTCGTCGGCG TCACGCGGGG CATCCGCTCC
GTGGTCGAGC CGATGAAGCG GCTCGCCTCG GGCGATCTGA CGGCCGAAAT CCCGCATCGC
GGCGCCAGGA CCGAGATCGG CACGATCGCC GACGCGGTGC AGGTGTTCAA GGACGGCCTC
ATCCGCATGC GGTCGATGGA GGAGGAAGCC GCCTCGGCAC GGGCCGGTAC CGAGGCCCAG
CGCAAGCGAA CGATGCGGGA ACTCGCGGAC GGCTTCGAGG CAGCGGTCGG AGGCATCATC
GGCTTGGTCT CGTCCTCCGC CACCGAACTC CAGGCGACGG CCCAGAGCAT GGCCGGCCTC
GCCACCAAGA CGGCGGGACA ATCGACGACG GTGGCTGCGG CCGCCCAGCA GGCCGCGACG
AATGTCGGCA CGGTCGCGAC GGCCGCCGAG GAACTGGGAA GCTCGGTCCA AGAGATCGGC
CGGCAGGTGG ACGGCTCGGC GAGCCTCGCT CAGCTTGCCG TGAACGAGGC CTCGCGCTCG
GCCGCCCTGG TGGAGGAACT GAGCAGCTCG GTGGCGCAGA TCGGCGACGT CGTGACGATG
ATCTCGACCA TCGCCGGCCA GACCAACCTG CTCGCCCTCA ATGCCACCAT CGAGGCCGCC
CGGGCCGGCG AGGCCGGCCG CGGCTTCGCT GTGGTCGCGA CGGAGGTGAA GGAGCTCGCG
GGCCAGACGG CCCGGGCCAC CGAGCAGATT TCGGCCCAGA TCGGCCGCAT CCAGGGCTCG
ACCAATCAGG CGGTCGCTTC GATCAGCAGC ATCGGCGACC GTATTCAGGA GATCAGCCGC
ACGGCGACGG CGATTGCCGC CGCGGTCGAG GAGCAGGGCA TGGCGACCCA GGAGATCGTG
CGCAATGTCG CCGAGGCGGC CGCCGGCACC GGCGAGGTGA CAGGCAACAT CACGGGCGTG
GCGAGCGCGG CGGAGGAGAC AGGCGCCGCC GCCTCCCAGG TGCTCGGCGC GGCCTCCGAG
CTGTCACGCC AGTCGGAGCA CCTCTCCAGC GAAGTCAGCC GCTTCCTGGC GACCGTCCGA
GCGGCCTGA
 
Protein sequence
MSLHSLSIKS KLISAFTAMV LCLIVVSAIA MTSINNLSNE NEHLGQNSIP SIRYAGELRG 
NVIDVRVSVI NHLLYQELER MQAEEKSLEA KTAAVAKAMR GYEPLISLSG EQELFDRFKT
EWAAYLEAVQ GVLAHSRNGR KDLAQDESAR NVRPRIKVAA QALDDIIVLN NKAGEIVVAR
SDASARSAKN LMLAIGCGAI LLAIALATLI VVGVTRGIRS VVEPMKRLAS GDLTAEIPHR
GARTEIGTIA DAVQVFKDGL IRMRSMEEEA ASARAGTEAQ RKRTMRELAD GFEAAVGGII
GLVSSSATEL QATAQSMAGL ATKTAGQSTT VAAAAQQAAT NVGTVATAAE ELGSSVQEIG
RQVDGSASLA QLAVNEASRS AALVEELSSS VAQIGDVVTM ISTIAGQTNL LALNATIEAA
RAGEAGRGFA VVATEVKELA GQTARATEQI SAQIGRIQGS TNQAVASISS IGDRIQEISR
TATAIAAAVE EQGMATQEIV RNVAEAAAGT GEVTGNITGV ASAAEETGAA ASQVLGAASE
LSRQSEHLSS EVSRFLATVR AA