| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3547 |
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| Symbol | |
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| ID | 4024061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3942075 |
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| End bp | 3943775 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637963751 |
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| Product | chemotaxis sensory transducer |
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| Protein accession | YP_570671 |
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| Protein GI | 91978012 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTGGC TCAACAACGT AACAATCTCT CTAAAAATTG CGATCATCGT CGGCTTGTTA
GCGATCGTTT GCCTGGGATC GATAAGTTTC GCGACCCTCC AGATGAAACG CATTGATGAT
TCGTACTCCG ATCTTGTCGG TCGCATCGAT AAGGGCACGG TCAGCCAGGT CCGCGCCGCC
CGGCAAGCAG AGGCCTTCGT ATCGGCGGCC TTTCAAATGG CGACTGAAAC AACCGATGAC
GGCGTGTCGC GACTCGCGGC GAGAGTCGCC GAAACCCAAC GAGATCTCGA GGCGCGCATG
GCGGACATCC TCGTCAAGCT GCCGGAAAAA TCAGCCGCGT ATGAGCCGAT TCTCGCTCAA
TACAAGCAAG CGTTTCTGGC TTGCGGGCCC GCGGTCGCAT TCGCGATGTC GACGCGCTCG
CCCGAAGACA ATATGAAGGC CGCCGAACGC CTGAAACTCG AGTGTGTACC GAGAATCGAA
GCCGCGACCC GTTCGCACGT AAAGATCAAT GACGGCATCA TTGCGTATGC CGAGAAGGCC
TCAGGCGACC TGACGGATGC GACCGATTCG ACCATTCAGA ATTGCCTGCT GTTCTCGATC
GCGGGCCTTT TGTTCGGCCT CATCGTCTCA CTGTGGATTG GCGTCAGGGG GCTATCGAAG
CCGATCGGCA AGCTGAAGGA AGTAATGGAA CTGTTCGCCA AGAACGATCT CAATGCCGAT
ATTCCGGGCA TCAAACGCGG CGACGAATTG GGCGAGATGG CCCGCGCCGT TGGAGTATTC
AAGGCAAGCG CCCTTGAAGT CGAGCGGCTG CGCTGCGGAC AGCAAGAAAG CGAACGCCGC
ATTGCGGAAG AGCGCAAGAC GGAGATGCGA AAGCTCGCCG ATGAATTCGA AGCAGCGGTC
GGTCAGATCG TCGAAACCGT GTCTTCCGCA TCGACCGAGT TGGAGGCTTC TGCGAGCACG
CTGACCAAGT CAGCGGAACG CACACAGGAG GTCACAACCA CAGTTGCAGC GGCGTCCGAA
GAAGCCTCGG CCAACGTTCA ATCAGTGGCC TCCGCGACCG AGGAAATGGC GTCGTCCATC
AATGAGATCA GCCGCCAGGT TCAGGAGTCG GCCCGGATTG CGAATGAAGC CGTTGACCAG
GCCCGCAAGA CGAACGATCG GGTCGGCGAT CTGGCCAAGG CGGCCAGCCG GATCGGGGAC
GTGGTCGATC TGATCAACAG CATTGCCGGT CAAACGAATC TGCTGGCGCT GAACGCAACG
ATCGAAGCCG CACGCGCCGG CGAAGCAGGT CGAGGATTCG CGGTGGTTGC ATCCGAGGTG
AAGGCGCTTG CCGAGCAGAC CGCGAAAGCC ACCGGGGAGA TCGGCCAGCA GATCACCGGA
ATGCAGGTGG CGACCGACGA CTCCGTCAGT GCGATCAAGG AGATTAGCGG GACGATCGCA
CGCATGTCGG AGATCTCGTC AACGATTGCT TCTGCGGTCG AGGAGCAGGG CGCGGCGACA
CAGGAGATTT CGCGCAACGT CCAACAGGCC GCACGGGGCA CGTCCGAGGT GTCGTCGAAC
ATCAGCGACG TGCGGAGTGG CGCCAGCGAG ACAGGCTCGG CCTCTTCGCA AGTTCTTTCG
GCCGCGCAAT CCTTGTCGCG CGACAGCAAC CAATTGAAAC TACAGGTCGT CAATTTCCTG
AGCAAGGTAC GCGCCGCCTA G
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| Protein sequence | MNWLNNVTIS LKIAIIVGLL AIVCLGSISF ATLQMKRIDD SYSDLVGRID KGTVSQVRAA
RQAEAFVSAA FQMATETTDD GVSRLAARVA ETQRDLEARM ADILVKLPEK SAAYEPILAQ
YKQAFLACGP AVAFAMSTRS PEDNMKAAER LKLECVPRIE AATRSHVKIN DGIIAYAEKA
SGDLTDATDS TIQNCLLFSI AGLLFGLIVS LWIGVRGLSK PIGKLKEVME LFAKNDLNAD
IPGIKRGDEL GEMARAVGVF KASALEVERL RCGQQESERR IAEERKTEMR KLADEFEAAV
GQIVETVSSA STELEASAST LTKSAERTQE VTTTVAAASE EASANVQSVA SATEEMASSI
NEISRQVQES ARIANEAVDQ ARKTNDRVGD LAKAASRIGD VVDLINSIAG QTNLLALNAT
IEAARAGEAG RGFAVVASEV KALAEQTAKA TGEIGQQITG MQVATDDSVS AIKEISGTIA
RMSEISSTIA SAVEEQGAAT QEISRNVQQA ARGTSEVSSN ISDVRSGASE TGSASSQVLS
AAQSLSRDSN QLKLQVVNFL SKVRAA
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