Gene BBta_2905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2905 
Symbol 
ID5153750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3017298 
End bp3018926 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content66% 
IMG OID640557784 
Productputative methyl-accepting chemotaxis protein 
Protein accessionYP_001238938 
Protein GI148254353 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.234112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.211145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTGT CCATCATCGC CAGCGTGATC ACATGGCAGA ACCTCACCAC GCTGGCGCAG 
AACAATTCCT GGACGGTGCA TACCTATCAA GTGATGGAGC AGGCCAAGGC GCTGGTCTCC
GCGATGGTCG ATGCCGAAAC CGGCGTGCGC GGCTTCCTGG TCGGCGGCAC CGACAACTTC
CTCGAGCCCT ACAAGAATTC TGATGCCGCC TTCAAGAAGG CACTGACGGA GGTGAAGCAG
CTGACCTCCG ACAATCCGGC TCAGCAACGC CGCTTCGAGC AGATCGAGAA GGCCGCGACC
GGCTGGCGCC AGGACGTGGC GGAGAAAGAG ATCGCGCTGA TGCGCAATCC GCAGACCGTA
CAGGAGGCGC GCAACCTCGA AGCCTCCGGC GCCGGCAAGA AGTACATGGA TGGTCTTCGC
GCGCTGGTGA AGGAAGCGGT CGACGTCGAA GCGGCGTTGC TGCAGACGCG TGCGGACGCG
GCCGACGCCG CTCTGGCGTC GTCGAAGACG GCGATCGTGA CCGGCGGCAC CGTCATGGCA
GTGATCGCGG TGATCGCGCT GCTGGTGCTG AATTCCGCCG TGACCCGCGG CATCACCAGC
ATGACCGCCG CCATGGGGCG GCTGGCCAAC AATGATCTCA GCGTGACGAT TCCCTATGCC
GATCGCCGTG ACGAGGTCGG CGAGATGGCC AAGGCCGTGC AGATCTTCAA GGACAATGCC
ATCCGCGTCC AGGCGCTCGA GGCCGAGCAG AAGGAGACGG AGCGCCGGCA GGCCGAGCAG
CGCCGCCGGG AGATGATGGA CCTCGCCGGC CGCTTCGAGC AGACCGTCGG TGACATTGTG
AACGCCGTGT CCACCGCGTC AGGCCGGCTG GAGACCTCGG CCAACTCGCT GAGCCGCTCC
GCCGAACGTG CGCAGCAGGT GACGACGACC GTGGCATCGG CGTCCGAACT GGCCTCCACC
AACGTGCAGT CGGTGGCGTC GGCCACCGAG GAACTGTCGT CGTCGGTGAC CGAGATCAGC
CGCCAGGTGC AGGAATCGGC CCGGATGGCG GGCGAGGCCG TCAACCAGGC CCGCCGCACC
AACGAGCAGG TGAGCGAGCT CTCCAAGGCG GCCGCGCGCA TCGGCGACGT CGTCGAACTG
ATCAACACGA TCGCCGGCCA GACCAACCTT CTGGCGCTCA ACGCCACGAT CGAGGCGGCG
CGCGCCGGGG AAGCGGGCCG TGGCTTCGCC GTGGTCGCCA CCGAAGTGAA GGCGCTTGCC
GAGCAGACCT CGAAGGCGAC CGGCGAGATC GGTCAGCAGA TTTCCGGCAT CCAGAGCGCG
ACCCAGGAAT CGGTTGGCGC CATCAAGGAA ATTTCGGCGA CCATCGAGCG GCTTTCGGAG
ATCGCGTCGA CCATTGCCGC CGCGGTCGAG GAGCAGGGCG CCGCCACCCA GGAGATTTCC
CGCAACGTCC AGCACGCTTC CCAGGGCACG AAAGATGTCT CGACCAACAT CGTCGAGGTC
CAGCGCGGCG CCAATGAAAC CGGCTCCGCC TCCTCCGAGG TGTTGTCTGC GGCCCAGGCG
CTGTCGTCCG ACAGCAACCG TCTCAAGGCC GAAGTGAGCC GCTTCCTCAA TACCGTCCGC
GCCGCCTGA
 
Protein sequence
MVVSIIASVI TWQNLTTLAQ NNSWTVHTYQ VMEQAKALVS AMVDAETGVR GFLVGGTDNF 
LEPYKNSDAA FKKALTEVKQ LTSDNPAQQR RFEQIEKAAT GWRQDVAEKE IALMRNPQTV
QEARNLEASG AGKKYMDGLR ALVKEAVDVE AALLQTRADA ADAALASSKT AIVTGGTVMA
VIAVIALLVL NSAVTRGITS MTAAMGRLAN NDLSVTIPYA DRRDEVGEMA KAVQIFKDNA
IRVQALEAEQ KETERRQAEQ RRREMMDLAG RFEQTVGDIV NAVSTASGRL ETSANSLSRS
AERAQQVTTT VASASELAST NVQSVASATE ELSSSVTEIS RQVQESARMA GEAVNQARRT
NEQVSELSKA AARIGDVVEL INTIAGQTNL LALNATIEAA RAGEAGRGFA VVATEVKALA
EQTSKATGEI GQQISGIQSA TQESVGAIKE ISATIERLSE IASTIAAAVE EQGAATQEIS
RNVQHASQGT KDVSTNIVEV QRGANETGSA SSEVLSAAQA LSSDSNRLKA EVSRFLNTVR
AA