Gene RPC_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3378 
Symbol 
ID3970538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3755522 
End bp3757213 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content64% 
IMG OID637926490 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_533238 
Protein GI90424868 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.104618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCTC GTCTCTCAAT TCGTGCCAAG ATCACCATCG TTCTGGCCTT CCTACTGATC 
ACCATGTCGG GCCTCGGGCT GATTGCCGTC AGAAGCATGA GCTCGATCAA CACCAGGGTG
ACGGAGCTGC GGACCGACTG GCTGCCCAGC GTCCGGCTGC TCGGCGAATT GAAGAGCAAT
CTTCTCGCCT ATCGCAGCAT CGTGCGCTCC CACATGTTGG AGTTGACCGC CGAAGGCAAG
GCGGCGGCTG AAAAGCGCAT TGCCAGCAAT GTCCAGAGCA CGTTGAAGAT TCGCCAGGCC
TATGAGAAGG CCATCAATTC TGCCGAAGAG CGGGCGCTCT ACAACGACTG GGCGCAGCAG
TGGGGGCAGT ATGAAGCCGC GATCCAGCCG GTGCTCGAAC TCTCCCGCAA CAGCCTCGGA
AAGTACCCGC TCGAGGCCCA GGAGCTGAAC GAGAGCAAAG TCCTCGCCGT CGGTCAAAAG
GCCGACGCCA TTCTGGCCAA GGATATCGAG CTCAACAACA AGGGGGCAGA GGAGGCCGGG
TCGGCCGCCG ATGCCGCCTA CAATACGTCT TTCCTGCTGC TGGTCGTGAT CATCGCCGCC
GCCGGCGTGC TCGGTATCGG TGTCGGCCTT TACCTGGTTC GCGACGTTTC GAACGGCATC
AATTCGATCG TGACCCCGAT GCAGGCGCTC GGCCGCGGCG AGCTTGATGC CGTGGTGCCG
CATCAGGGCG AAACCACCGA AATCGGCAAG ATGGCCGACG TCCTGCAGGT GTTCAAGGAA
GCGCTGATCG CCAAGCGTGA GGCGGATCAG GCCGCCAGCG TCGAGGCCGA CGCCAAGATC
CAGCGCGGCC AGCGGGTCGA CAGCATTACC CGTGAATTCG AATCGATGAT CGGCGAGATC
GTGCAGACCG TGTCCTCGGC CTCCAACGAA TTGGAAGCCT CCGCCGCGAC GCTGACCGCC
ACCGCCGAGC GTTCGCAGCA ACTCACCTCG ATGGTCGCCG CGGCGTCCGG AGAGGCTTCC
ACCAACGTGC AGTCGGTGGC GTCGGCCACC GAGGAGATGT CGTCGTCGAT CACCGAGATC
AGCCGCCAGG TGCAGGAATC CTCGCGGATC GCCGCCGAGG CGGTGAACCA GGCGCAGAAG
ACCAACGACC GGGTCGGCGA GCTGGCCAAG GCGGCGAGCC GGATCGGCGA CGTCGTCGAA
CTGATCAACA CCATCGCCGG GCAGACCAAT CTGCTGGCGC TGAACGCCAC CATCGAAGCC
GCCCGTGCCG GCGAGGCCGG CCGCGGCTTT GCGGTGGTCG CCTCGGAAGT GAAGGCGCTG
GCGGAACAGA CCGCGAAAGC CACCGGCGAA ATCGGCCAGC AGATCACCGG CATTCAGGCC
GCCACCCAGG AGTCGGTCGG CGCCATCAAG GAGATCGGCG ACACCATCGG CAAAATGTCG
GAGATCGCCT CGACCATCGC TTCCGCGGTT GAACAGCAGG GCGCCGCCAC TCAGGAAATC
TCCCGCAACG TGCAGCAGGC CGCGCAAGGC ACCCAACAGG TGTCGTCCAA CATCACCGAC
GTCGAACGCG GCGCCGCCGA AACCGGCTCG GCGTCCTCGC AGGTGCTGTC GGCGGCGCAG
TCTTTGTCGC GGGACAGCAG CCGGTTGAAG GTCGAAGTGG ACAAATTCCT CAGCACGGTG
CGCGCCGCCT AG
 
Protein sequence
MLARLSIRAK ITIVLAFLLI TMSGLGLIAV RSMSSINTRV TELRTDWLPS VRLLGELKSN 
LLAYRSIVRS HMLELTAEGK AAAEKRIASN VQSTLKIRQA YEKAINSAEE RALYNDWAQQ
WGQYEAAIQP VLELSRNSLG KYPLEAQELN ESKVLAVGQK ADAILAKDIE LNNKGAEEAG
SAADAAYNTS FLLLVVIIAA AGVLGIGVGL YLVRDVSNGI NSIVTPMQAL GRGELDAVVP
HQGETTEIGK MADVLQVFKE ALIAKREADQ AASVEADAKI QRGQRVDSIT REFESMIGEI
VQTVSSASNE LEASAATLTA TAERSQQLTS MVAAASGEAS TNVQSVASAT EEMSSSITEI
SRQVQESSRI AAEAVNQAQK TNDRVGELAK AASRIGDVVE LINTIAGQTN LLALNATIEA
ARAGEAGRGF AVVASEVKAL AEQTAKATGE IGQQITGIQA ATQESVGAIK EIGDTIGKMS
EIASTIASAV EQQGAATQEI SRNVQQAAQG TQQVSSNITD VERGAAETGS ASSQVLSAAQ
SLSRDSSRLK VEVDKFLSTV RAA