| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3378 |
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| Symbol | |
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| ID | 3970538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3755522 |
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| End bp | 3757213 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926490 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_533238 |
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| Protein GI | 90424868 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.104618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCTC GTCTCTCAAT TCGTGCCAAG ATCACCATCG TTCTGGCCTT CCTACTGATC
ACCATGTCGG GCCTCGGGCT GATTGCCGTC AGAAGCATGA GCTCGATCAA CACCAGGGTG
ACGGAGCTGC GGACCGACTG GCTGCCCAGC GTCCGGCTGC TCGGCGAATT GAAGAGCAAT
CTTCTCGCCT ATCGCAGCAT CGTGCGCTCC CACATGTTGG AGTTGACCGC CGAAGGCAAG
GCGGCGGCTG AAAAGCGCAT TGCCAGCAAT GTCCAGAGCA CGTTGAAGAT TCGCCAGGCC
TATGAGAAGG CCATCAATTC TGCCGAAGAG CGGGCGCTCT ACAACGACTG GGCGCAGCAG
TGGGGGCAGT ATGAAGCCGC GATCCAGCCG GTGCTCGAAC TCTCCCGCAA CAGCCTCGGA
AAGTACCCGC TCGAGGCCCA GGAGCTGAAC GAGAGCAAAG TCCTCGCCGT CGGTCAAAAG
GCCGACGCCA TTCTGGCCAA GGATATCGAG CTCAACAACA AGGGGGCAGA GGAGGCCGGG
TCGGCCGCCG ATGCCGCCTA CAATACGTCT TTCCTGCTGC TGGTCGTGAT CATCGCCGCC
GCCGGCGTGC TCGGTATCGG TGTCGGCCTT TACCTGGTTC GCGACGTTTC GAACGGCATC
AATTCGATCG TGACCCCGAT GCAGGCGCTC GGCCGCGGCG AGCTTGATGC CGTGGTGCCG
CATCAGGGCG AAACCACCGA AATCGGCAAG ATGGCCGACG TCCTGCAGGT GTTCAAGGAA
GCGCTGATCG CCAAGCGTGA GGCGGATCAG GCCGCCAGCG TCGAGGCCGA CGCCAAGATC
CAGCGCGGCC AGCGGGTCGA CAGCATTACC CGTGAATTCG AATCGATGAT CGGCGAGATC
GTGCAGACCG TGTCCTCGGC CTCCAACGAA TTGGAAGCCT CCGCCGCGAC GCTGACCGCC
ACCGCCGAGC GTTCGCAGCA ACTCACCTCG ATGGTCGCCG CGGCGTCCGG AGAGGCTTCC
ACCAACGTGC AGTCGGTGGC GTCGGCCACC GAGGAGATGT CGTCGTCGAT CACCGAGATC
AGCCGCCAGG TGCAGGAATC CTCGCGGATC GCCGCCGAGG CGGTGAACCA GGCGCAGAAG
ACCAACGACC GGGTCGGCGA GCTGGCCAAG GCGGCGAGCC GGATCGGCGA CGTCGTCGAA
CTGATCAACA CCATCGCCGG GCAGACCAAT CTGCTGGCGC TGAACGCCAC CATCGAAGCC
GCCCGTGCCG GCGAGGCCGG CCGCGGCTTT GCGGTGGTCG CCTCGGAAGT GAAGGCGCTG
GCGGAACAGA CCGCGAAAGC CACCGGCGAA ATCGGCCAGC AGATCACCGG CATTCAGGCC
GCCACCCAGG AGTCGGTCGG CGCCATCAAG GAGATCGGCG ACACCATCGG CAAAATGTCG
GAGATCGCCT CGACCATCGC TTCCGCGGTT GAACAGCAGG GCGCCGCCAC TCAGGAAATC
TCCCGCAACG TGCAGCAGGC CGCGCAAGGC ACCCAACAGG TGTCGTCCAA CATCACCGAC
GTCGAACGCG GCGCCGCCGA AACCGGCTCG GCGTCCTCGC AGGTGCTGTC GGCGGCGCAG
TCTTTGTCGC GGGACAGCAG CCGGTTGAAG GTCGAAGTGG ACAAATTCCT CAGCACGGTG
CGCGCCGCCT AG
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| Protein sequence | MLARLSIRAK ITIVLAFLLI TMSGLGLIAV RSMSSINTRV TELRTDWLPS VRLLGELKSN
LLAYRSIVRS HMLELTAEGK AAAEKRIASN VQSTLKIRQA YEKAINSAEE RALYNDWAQQ
WGQYEAAIQP VLELSRNSLG KYPLEAQELN ESKVLAVGQK ADAILAKDIE LNNKGAEEAG
SAADAAYNTS FLLLVVIIAA AGVLGIGVGL YLVRDVSNGI NSIVTPMQAL GRGELDAVVP
HQGETTEIGK MADVLQVFKE ALIAKREADQ AASVEADAKI QRGQRVDSIT REFESMIGEI
VQTVSSASNE LEASAATLTA TAERSQQLTS MVAAASGEAS TNVQSVASAT EEMSSSITEI
SRQVQESSRI AAEAVNQAQK TNDRVGELAK AASRIGDVVE LINTIAGQTN LLALNATIEA
ARAGEAGRGF AVVASEVKAL AEQTAKATGE IGQQITGIQA ATQESVGAIK EIGDTIGKMS
EIASTIASAV EQQGAATQEI SRNVQQAAQG TQQVSSNITD VERGAAETGS ASSQVLSAAQ
SLSRDSSRLK VEVDKFLSTV RAA
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