Gene BBta_6635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6635 
Symbolmcpa 
ID5149357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6901130 
End bp6902827 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content61% 
IMG OID640561328 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_001242442 
Protein GI148257857 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.459746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.104137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCT TAGATAATCT CAAAATCGTC TGGAAACTCG GTCTCATCGT CGCGGTGCTT 
GGTTCGGCAC TTGTGGGGAT CGTTGCCTAT AGTACCGTCC AGCTGGCTGG CACGGTCGAG
GACTTCTCCG AGCTGATCTC GGACCAGTCA GCCAATATCG GTCTCGTCCG GGCTCAGCGC
CGCGCCGAGA CGTATCATGC GGCTCTCTAC GCGCTCCTCA CGGAAACGAC AGACGAGGCG
AATGCGAGTC GGATGAAGAC CGCAGTGGAG GCACGTGACG GGATCGCGGG ACTGTTGCAG
GCGGCCGCCA AAGATAGCGC GATTCAAGCG AATGACATCC GAAACTTCGC CTCACGGTTT
CAGGCCACAT TTGCCGCGTG CGATCCGATT CTGCTAGCGG CCGCGAAATC GACGACAGCT
CAAGAAAATG CCAAAGTGGG CGAGCGGGCA CACAAGGAAT GTGACCCATC GATCGATCGA
TTGCTTGATG AGCTTCAGAA GTTCTCCTTG GCGACGGTTG ACCGGGTGAA CAAGCAGCGT
GCGGCGCTCA GAGCGGAGGC TGCCGCAACC ACTCGCAACG TTCTGCTGGT TGGCGGGGCA
GGTCTCCTCA TCGGCGTTCT CGCCGCCTTG TTCATTGGAT TGAAGTCATT GTCAGGACCC
GTTGCAAGGC TCAAGGAGGC CATGGGGCGG CTCGCCAATA ACGATCTGAC GACGGAGGTG
CCCGAGATCG CGCGCCGTGA CGAGATCGGC GAGATGGCCA AGACCGTGGA GGTGTTCAAG
ACCAACGGGC TTGAAGTGGC TCGGCTGAAG CAGGCACAAG AGGAGGCGGA ACGGAAGGCA
TCAGAACAGC GCCGCCGCGA CATGCTCGAT CTCGCGGACC GCTTCGAGCA CGCTGTCGGT
GAAATCGTGG ATACGGTCTC CTCGGCATCA ACCGAGCTGG AAGCCTCTGC CGGCAGTTTG
AGCACGACCG CCTCGCGCTC TCAGGAACTG TCGACGACGG TTGCTGCAGC CTCGGAAGAA
GCCTCGACCA ATGTCCAGTC AGTAGCTTCG GCCACCGAGG AATTGTCATC CTCCGTCACG
GAGATCAGCC GGCAGGTGCA GGAGTCCGCC CGTATGGCCA ACGATGCGGT CAATCAGGCG
CGAAAGACGA ATGATCAAGT CGCCGAACTG TCCAAGGCCG CAGGCCGTAT TGGCGACGTC
GTTGAACTGA TCAACACGAT CGCGGGCCAG ACCAATCTCC TCGCGCTGAA CGCGACCATC
GAGGCGGCTC GGGCCGGCGA AGCGGGCCGC GGATTCGCGG TCGTTGCAAC CGAGGTCAAG
GCCCTGGCGG AGCAGACTGC AAAGGCAACA GGAGAAATCG GTCAGCAGAT CGGCAGCATC
CAGGCTGCGA CCAACGAGTC GGTCGATGCG ATCAAGGCGA TCTCGACGAC GATCGAAAAG
TTGTCGGAGA TTGCGTCCAC CATCGCCGCC GCGGTGGAAG AACAGGGCGC CGCAACGCAG
GAAATCTCCC GCAACGTCCA GCAAGCTGCC GCGGGCACGC AGCAGGTATC GACCAATGTC
GTCGATGTGC AACGCGGCGC TTCTGAAACC GGGTCTGCGT CGAGCCAAGT GCTCGCGGCG
GCGAAGTCGC TCTCGCGCGA CAGCGAGCGA CTCAAGGTCG AGATTGGCCG TTTCCTCTCG
ACGGTGCGGG CTGCCTAA
 
Protein sequence
MKLLDNLKIV WKLGLIVAVL GSALVGIVAY STVQLAGTVE DFSELISDQS ANIGLVRAQR 
RAETYHAALY ALLTETTDEA NASRMKTAVE ARDGIAGLLQ AAAKDSAIQA NDIRNFASRF
QATFAACDPI LLAAAKSTTA QENAKVGERA HKECDPSIDR LLDELQKFSL ATVDRVNKQR
AALRAEAAAT TRNVLLVGGA GLLIGVLAAL FIGLKSLSGP VARLKEAMGR LANNDLTTEV
PEIARRDEIG EMAKTVEVFK TNGLEVARLK QAQEEAERKA SEQRRRDMLD LADRFEHAVG
EIVDTVSSAS TELEASAGSL STTASRSQEL STTVAAASEE ASTNVQSVAS ATEELSSSVT
EISRQVQESA RMANDAVNQA RKTNDQVAEL SKAAGRIGDV VELINTIAGQ TNLLALNATI
EAARAGEAGR GFAVVATEVK ALAEQTAKAT GEIGQQIGSI QAATNESVDA IKAISTTIEK
LSEIASTIAA AVEEQGAATQ EISRNVQQAA AGTQQVSTNV VDVQRGASET GSASSQVLAA
AKSLSRDSER LKVEIGRFLS TVRAA