Gene Rpal_2757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2757 
Symbol 
ID6410421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2999524 
End bp3001209 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content63% 
IMG OID642712633 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001991741 
Protein GI192291136 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0630329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTTT CGAACGTCAA ATTGCTCTAC AAGATCATCG GGTGTTTCTT ATTGCTCAGT 
GTGGTCGTCG GATTCGGAAT CTGGTTCGCC GCTTCGAAGA TGGAGGAGAT CGACCGGACC
TACGCGTCGA TGCTCGAAAA CGAAGTGCAG GGCATGAAAG CGAATTTCCG CGCCAACGCC
CGCCTGTTCA ATTTCGGGCG GATGTCGTGG CGGATCATCG CCGAAACAGA TCCGGCCGAA
ATGCAGAAGC TCAGCCGGGA AATTGCGGCC AATCATAAGG AGTTCAGCGA TTTCGTCGCG
CAGGCGAAAA AAGGCCTGCC GCAATTTGCC GCGGACTTCG ATCGGATCGA TCGGATGTTC
GACGACATGA TGACGAAGGA ATACCCCCCG CTCGAGCAGG CCACAATGGC CAACAACAAC
GAGCTCGCGG TTCGTCTCGC CAAGGATATT GCCAAACACA ATCAGTCCGT GCGTGATGTA
CAATTTGCAA TCAGCAATAA ACTCGACAAG GAGCTGAGCG ATCGCTCGCA TGCGGCGTCG
GCCGATGTCG CCAGCACGAT CAAGCTGACG ATTCTGGTAG TCGGCGGTGG CTTCCTCGCC
GTGCTGGCAC TGGCGTTTGC GATCGTGCAG TTCGGCATCG CTCGTCCGAT CGGTCGGCTT
GTTGGCGATC TGCAGGCGAT GGCGCGTGGC CACGACGTCG AGGTGTCGGG CACCGAGCGC
GGCGACGAGA TCGGCCAGAC CGCGAATGCG GTCAACGACA TCAAGTTGAT GCTCGCCGAG
AAGGCACGGC AGGAGGCGGC GGGTAAAGCC GAGCAGGACC GCATCATCGC CGTCCAGCGC
AAGCAGGAGA TGGAGAAGCT CGCCCACCAT TTCGAAGCGG CGGTGGGCGA GGTGATCCGC
GCGGTGTCGT CGGCTTCGAC GGAACTGGAA GCATCGGCGA CGACGCTGAC GTCCAGCGCA
CAGCGCGCGC AGGAAGTCAC GACGTCCGTC GCTGCAGCAT CCGAACAGGC GTCGGCGAAC
GTGCAGTCGG TGGCGTCGGC GACCGAGGAG ATGGCCTCGT CGGTCACCGA GATCAGCCGG
CAGGTTCAGG ACTCCGCGCG CATTGCCCAT GAGGCGGTAA CTCAGGCGCA ACGTACCAAC
GAACGCGTCG GCGAACTGTC GCAGGCGGCG ACGCGGATCG GAGACGTGGT CGAACTGATC
AACACCATCG CCGGCCAGAC CAATCTGCTG GCGCTCAACG CGACCATCGA AGCGGCGCGC
GCCGGGGAGG CGGGACGCGG CTTTGCGGTG GTGGCGGCGG AAGTGAAGGC GCTCGCCGAG
CAGACCGCCA AGGCGACCGG CGAGATCAGT CAGCACATCG GCGGCATCCA GGCTGCAACC
CACGAGTCGG TGAACGCGAT CCGCGAGATC GGCTCCACGA TTTCGAAGAT GTCGGAGATC
GCCTCGACGA TCGCCTCGGC GGTGGAAGAG CAGGGCGCGG CGACGCAGGA GATCTCGCGC
AATGTGCAGC AGGCGGCGAT GGGCACGCAG CAGGTCTCGG CCAGCGTCGT CGACGTCCAG
CGCGGCGCCA ACGAGACCGG CTCGGCATCG ACGCAGGTGC TGTCGGCGGC GCAGTCGCTC
GCCAACGACA GCAACCGGCT GAGGATGGAA GTCGGCAAAT TCCTCGAAAC CGTCCGCGCC
GCATAA
 
Protein sequence
MQLSNVKLLY KIIGCFLLLS VVVGFGIWFA ASKMEEIDRT YASMLENEVQ GMKANFRANA 
RLFNFGRMSW RIIAETDPAE MQKLSREIAA NHKEFSDFVA QAKKGLPQFA ADFDRIDRMF
DDMMTKEYPP LEQATMANNN ELAVRLAKDI AKHNQSVRDV QFAISNKLDK ELSDRSHAAS
ADVASTIKLT ILVVGGGFLA VLALAFAIVQ FGIARPIGRL VGDLQAMARG HDVEVSGTER
GDEIGQTANA VNDIKLMLAE KARQEAAGKA EQDRIIAVQR KQEMEKLAHH FEAAVGEVIR
AVSSASTELE ASATTLTSSA QRAQEVTTSV AAASEQASAN VQSVASATEE MASSVTEISR
QVQDSARIAH EAVTQAQRTN ERVGELSQAA TRIGDVVELI NTIAGQTNLL ALNATIEAAR
AGEAGRGFAV VAAEVKALAE QTAKATGEIS QHIGGIQAAT HESVNAIREI GSTISKMSEI
ASTIASAVEE QGAATQEISR NVQQAAMGTQ QVSASVVDVQ RGANETGSAS TQVLSAAQSL
ANDSNRLRME VGKFLETVRA A