| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1830 |
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| Symbol | |
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| ID | 6409488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1966061 |
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| End bp | 1967752 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711717 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001990831 |
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| Protein GI | 192290226 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGCCA ATGTCCCATT ACGGACGAAA ATCACTGCTC TGGTTGCGGT CCTGCTGATC
GCGCTCTCCG GCCTGGGTCT GCTCGGCCTG CTGCAGATGC GGACGTTGAA TACGAGCACC
GTCGATATCG GCACCAATTG GATGCCGTCG GTCCGCGTTC TCGGCGAAAT GCGCACCAAC
GTGGCGCTGT ATCGCAACAC GCTGCGCGCG CATCTGCTCG AAGCCACTAC CGAACGCAAG
CTCGCAACCG AGAAGCAGGT CGCCGCATTT GATGAGGCGG TGAAGCAATC GCTGCGCACC
TACGCGTCGA TGGTCGCAAC GCCGGAAGAG CGCAAGCTGT ACGACAGCCT CGTCGCGTCG
TGGACGAACT ACACCAGTCT CGCTCCCACA GGCCTCGAGA TGTCTCGCAA GGCCGCCGGT
GAGCTTCCAG TCGCCGCCAA CGACTACATG GCGAAGACGA TGGGCCCGAT CAGCGCGCAG
ATCGACGAGG TGCTGAAGAA GGACATCGAC CTCAACGACA AGGGTGCGGC AGGCGCCACT
GCGAGTGCGG AAGCGACTTA TTTGTGGGCG ATCTTCCTGA TGATCGGCAT CCTGGTCGTG
GCGATCGTGA TCGGCATCAC TGCGAGCATC CTGGTGATCC GCGATCTGTC GCGAGGCATC
GCCTCGATCG TCAAGCCGAT GCAGGATTTC ACTCGCGGCG ATCTCTCCGC CGAGGTGCCG
CATCGCGGCA AGAACACCGA GATCGGCGCC ATGGCCGATG CGCTGCAGGT GTTCAAACAG
GCGTTGCTCG ACAAGCTCAC GGCCGACGCG GCCGCCGCCA GGGATTCCGA AGACAAAATC
GCGCGTGGCC ATCGCATCGA CGCCGCGACC CGACAATTCG AAGCCTCCGT CGGGGAGATC
GTAGAAACCG TGTCGTCCGC ATCTACCGAG CTGGAAGCTT CGGCGCGCAC GCTCACCACG
ACAGCCCAAC ACGCTCAGGT GCAGGCGACT ACCGTGGCGG CGGCGTCCGA ACAGGCCTCG
ACCAACGTAC AGTCGGTGGC CTCGGCGACC GAGGAGATGA CCTCTTCGAT CAACGAGATC
AGCCGGCAGG TGCAGGAATC CGCTCGCATC GCCGTCGAGG CGGTCGATCA GGCGCGCAGG
ACCAACGCCA CCGTCGGCGA GCTGTCGCAG GCAGCCGCCC GGATCGGCGA CGTGGTCGAA
CTGATCAACA CGATCGCCGG CCAGACCAAC CTGCTCGCAC TCAACGCGAC GATCGAAGCG
GCACGTGCCG GCGAAGCCGG CCGCGGCTTC GCCGTGGTGG CAGCCGAAGT CAAAGCGCTG
GCCGAACAGA CCTCGAAGGC GACCGGCGAG ATCAGCCAGC ACATCGGCGG CATCCAGGCA
GCCACCGGCG AGTCGGTGTC GGCGATCCGC GAGATCGGCC ACACCATCGA GCGGATGTCG
GAAATCGCCT CGACCATCGC GTCGGCGGTC GAAGAACAAG GCGCCGCGAC CCAGGAGATC
GCCCGCAACG TTCAGCAGGC GGCGCGCGGC ACCAACGAAG TCTCCGCCAA CATCGTCGAC
GTGCAGCGCG GCGCCAGCGA GACCGGTTCG GCGTCGGCGC AGGTCCTGTC GGCAGCGCAA
TCGCTGTCGC AGGATTCCAG CCGGCTGAAG GTCGAAGTCG CCAACTTCCT GCAGAGCGTG
CGCTCGGCCT GA
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| Protein sequence | MLANVPLRTK ITALVAVLLI ALSGLGLLGL LQMRTLNTST VDIGTNWMPS VRVLGEMRTN
VALYRNTLRA HLLEATTERK LATEKQVAAF DEAVKQSLRT YASMVATPEE RKLYDSLVAS
WTNYTSLAPT GLEMSRKAAG ELPVAANDYM AKTMGPISAQ IDEVLKKDID LNDKGAAGAT
ASAEATYLWA IFLMIGILVV AIVIGITASI LVIRDLSRGI ASIVKPMQDF TRGDLSAEVP
HRGKNTEIGA MADALQVFKQ ALLDKLTADA AAARDSEDKI ARGHRIDAAT RQFEASVGEI
VETVSSASTE LEASARTLTT TAQHAQVQAT TVAAASEQAS TNVQSVASAT EEMTSSINEI
SRQVQESARI AVEAVDQARR TNATVGELSQ AAARIGDVVE LINTIAGQTN LLALNATIEA
ARAGEAGRGF AVVAAEVKAL AEQTSKATGE ISQHIGGIQA ATGESVSAIR EIGHTIERMS
EIASTIASAV EEQGAATQEI ARNVQQAARG TNEVSANIVD VQRGASETGS ASAQVLSAAQ
SLSQDSSRLK VEVANFLQSV RSA
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