Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1830 |
Symbol | |
ID | 6409488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1966061 |
End bp | 1967752 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642711717 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001990831 |
Protein GI | 192290226 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGCCA ATGTCCCATT ACGGACGAAA ATCACTGCTC TGGTTGCGGT CCTGCTGATC GCGCTCTCCG GCCTGGGTCT GCTCGGCCTG CTGCAGATGC GGACGTTGAA TACGAGCACC GTCGATATCG GCACCAATTG GATGCCGTCG GTCCGCGTTC TCGGCGAAAT GCGCACCAAC GTGGCGCTGT ATCGCAACAC GCTGCGCGCG CATCTGCTCG AAGCCACTAC CGAACGCAAG CTCGCAACCG AGAAGCAGGT CGCCGCATTT GATGAGGCGG TGAAGCAATC GCTGCGCACC TACGCGTCGA TGGTCGCAAC GCCGGAAGAG CGCAAGCTGT ACGACAGCCT CGTCGCGTCG TGGACGAACT ACACCAGTCT CGCTCCCACA GGCCTCGAGA TGTCTCGCAA GGCCGCCGGT GAGCTTCCAG TCGCCGCCAA CGACTACATG GCGAAGACGA TGGGCCCGAT CAGCGCGCAG ATCGACGAGG TGCTGAAGAA GGACATCGAC CTCAACGACA AGGGTGCGGC AGGCGCCACT GCGAGTGCGG AAGCGACTTA TTTGTGGGCG ATCTTCCTGA TGATCGGCAT CCTGGTCGTG GCGATCGTGA TCGGCATCAC TGCGAGCATC CTGGTGATCC GCGATCTGTC GCGAGGCATC GCCTCGATCG TCAAGCCGAT GCAGGATTTC ACTCGCGGCG ATCTCTCCGC CGAGGTGCCG CATCGCGGCA AGAACACCGA GATCGGCGCC ATGGCCGATG CGCTGCAGGT GTTCAAACAG GCGTTGCTCG ACAAGCTCAC GGCCGACGCG GCCGCCGCCA GGGATTCCGA AGACAAAATC GCGCGTGGCC ATCGCATCGA CGCCGCGACC CGACAATTCG AAGCCTCCGT CGGGGAGATC GTAGAAACCG TGTCGTCCGC ATCTACCGAG CTGGAAGCTT CGGCGCGCAC GCTCACCACG ACAGCCCAAC ACGCTCAGGT GCAGGCGACT ACCGTGGCGG CGGCGTCCGA ACAGGCCTCG ACCAACGTAC AGTCGGTGGC CTCGGCGACC GAGGAGATGA CCTCTTCGAT CAACGAGATC AGCCGGCAGG TGCAGGAATC CGCTCGCATC GCCGTCGAGG CGGTCGATCA GGCGCGCAGG ACCAACGCCA CCGTCGGCGA GCTGTCGCAG GCAGCCGCCC GGATCGGCGA CGTGGTCGAA CTGATCAACA CGATCGCCGG CCAGACCAAC CTGCTCGCAC TCAACGCGAC GATCGAAGCG GCACGTGCCG GCGAAGCCGG CCGCGGCTTC GCCGTGGTGG CAGCCGAAGT CAAAGCGCTG GCCGAACAGA CCTCGAAGGC GACCGGCGAG ATCAGCCAGC ACATCGGCGG CATCCAGGCA GCCACCGGCG AGTCGGTGTC GGCGATCCGC GAGATCGGCC ACACCATCGA GCGGATGTCG GAAATCGCCT CGACCATCGC GTCGGCGGTC GAAGAACAAG GCGCCGCGAC CCAGGAGATC GCCCGCAACG TTCAGCAGGC GGCGCGCGGC ACCAACGAAG TCTCCGCCAA CATCGTCGAC GTGCAGCGCG GCGCCAGCGA GACCGGTTCG GCGTCGGCGC AGGTCCTGTC GGCAGCGCAA TCGCTGTCGC AGGATTCCAG CCGGCTGAAG GTCGAAGTCG CCAACTTCCT GCAGAGCGTG CGCTCGGCCT GA
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Protein sequence | MLANVPLRTK ITALVAVLLI ALSGLGLLGL LQMRTLNTST VDIGTNWMPS VRVLGEMRTN VALYRNTLRA HLLEATTERK LATEKQVAAF DEAVKQSLRT YASMVATPEE RKLYDSLVAS WTNYTSLAPT GLEMSRKAAG ELPVAANDYM AKTMGPISAQ IDEVLKKDID LNDKGAAGAT ASAEATYLWA IFLMIGILVV AIVIGITASI LVIRDLSRGI ASIVKPMQDF TRGDLSAEVP HRGKNTEIGA MADALQVFKQ ALLDKLTADA AAARDSEDKI ARGHRIDAAT RQFEASVGEI VETVSSASTE LEASARTLTT TAQHAQVQAT TVAAASEQAS TNVQSVASAT EEMTSSINEI SRQVQESARI AVEAVDQARR TNATVGELSQ AAARIGDVVE LINTIAGQTN LLALNATIEA ARAGEAGRGF AVVAAEVKAL AEQTSKATGE ISQHIGGIQA ATGESVSAIR EIGHTIERMS EIASTIASAV EEQGAATQEI ARNVQQAARG TNEVSANIVD VQRGASETGS ASAQVLSAAQ SLSQDSSRLK VEVANFLQSV RSA
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