More than 300 homologs were found in PanDaTox collection
for query gene BBta_4269 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  62.95 
 
 
691 aa  803    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  61.94 
 
 
691 aa  803    Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  100 
 
 
691 aa  1346    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  74.71 
 
 
563 aa  472  1e-132  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2799  putative receptor/sensory transducer  48.24 
 
 
707 aa  469  1.0000000000000001e-131  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0655652  normal 
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  63.53 
 
 
563 aa  467  9.999999999999999e-131  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  71.05 
 
 
563 aa  468  9.999999999999999e-131  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  60.44 
 
 
561 aa  456  1e-127  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  66.5 
 
 
563 aa  451  1e-125  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  65.77 
 
 
563 aa  446  1.0000000000000001e-124  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  66.25 
 
 
670 aa  443  1e-123  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  66.31 
 
 
563 aa  440  9.999999999999999e-123  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  63.86 
 
 
563 aa  441  9.999999999999999e-123  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  58.78 
 
 
566 aa  441  9.999999999999999e-123  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  67.12 
 
 
567 aa  436  1e-121  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  68.94 
 
 
563 aa  434  1e-120  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  56.04 
 
 
566 aa  436  1e-120  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  61.76 
 
 
673 aa  430  1e-119  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  70.81 
 
 
563 aa  431  1e-119  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_009485  BBta_2902  methyl-accepting chemotaxis sensory transducer  70.22 
 
 
563 aa  427  1e-118  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.32606  normal  0.0943242 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  61.08 
 
 
561 aa  424  1e-117  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  62.05 
 
 
688 aa  423  1e-117  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  63.16 
 
 
562 aa  424  1e-117  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  63.56 
 
 
688 aa  424  1e-117  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  71.47 
 
 
562 aa  420  1e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  56.53 
 
 
675 aa  421  1e-116  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  70 
 
 
563 aa  421  1e-116  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  60.77 
 
 
688 aa  420  1e-116  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_007778  RPB_0489  methyl-accepting chemotaxis sensory transducer  64.9 
 
 
564 aa  416  9.999999999999999e-116  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.301128  normal 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  61.73 
 
 
672 aa  418  9.999999999999999e-116  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  64.86 
 
 
563 aa  417  9.999999999999999e-116  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  64.17 
 
 
573 aa  417  9.999999999999999e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007958  RPD_0336  chemotaxis sensory transducer  70 
 
 
563 aa  416  9.999999999999999e-116  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  63.12 
 
 
561 aa  414  1e-114  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  66.94 
 
 
587 aa  414  1e-114  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  60.88 
 
 
565 aa  409  1e-113  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  68.6 
 
 
563 aa  410  1e-113  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  72.59 
 
 
731 aa  411  1e-113  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  64.64 
 
 
655 aa  409  1e-113  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  62.43 
 
 
688 aa  412  1e-113  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  63.38 
 
 
674 aa  411  1e-113  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  65.75 
 
 
565 aa  408  1.0000000000000001e-112  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007925  RPC_4101  methyl-accepting chemotaxis sensory transducer  45.44 
 
 
698 aa  408  1.0000000000000001e-112  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  68.1 
 
 
568 aa  404  1e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  58.55 
 
 
730 aa  402  1e-111  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  62.36 
 
 
689 aa  403  1e-111  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  64.31 
 
 
572 aa  405  1e-111  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  60.55 
 
 
561 aa  403  1e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  59 
 
 
560 aa  401  9.999999999999999e-111  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  65.71 
 
 
674 aa  401  9.999999999999999e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  62.87 
 
 
656 aa  401  9.999999999999999e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  68.83 
 
 
563 aa  398  1e-109  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  66.01 
 
 
552 aa  398  1e-109  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  59.49 
 
 
656 aa  396  1e-109  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  62.33 
 
 
656 aa  395  1e-108  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  60.53 
 
 
567 aa  395  1e-108  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  59.74 
 
 
542 aa  394  1e-108  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  63.98 
 
 
561 aa  393  1e-108  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  54.99 
 
 
741 aa  395  1e-108  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  61.44 
 
 
602 aa  393  1e-108  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  61.32 
 
 
730 aa  393  1e-108  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2903  methyl-accepting chemotaxis sensory transducer  63.45 
 
 
568 aa  389  1e-107  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335645  normal  0.0996392 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  64.93 
 
 
675 aa  392  1e-107  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  58.59 
 
 
564 aa  386  1e-106  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  62.64 
 
 
568 aa  389  1e-106  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.52 
 
 
716 aa  385  1e-105  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  66.29 
 
 
556 aa  382  1e-104  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_007925  RPC_1253  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
567 aa  380  1e-104  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.010155 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  62.6 
 
 
566 aa  382  1e-104  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  41.5 
 
 
698 aa  379  1e-103  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  62.2 
 
 
577 aa  376  1e-103  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2996  methyl-accepting chemotaxis protein  47.17 
 
 
698 aa  375  1e-102  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2961  methyl-accepting chemotaxis sensory transducer  62.47 
 
 
563 aa  374  1e-102  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1388  methyl-accepting chemotaxis sensory transducer  59.62 
 
 
656 aa  372  1e-101  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0527529  normal  0.207734 
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  60.82 
 
 
561 aa  367  1e-100  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  52.4 
 
 
676 aa  364  3e-99  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
694 aa  364  3e-99  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  54.72 
 
 
714 aa  364  3e-99  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_007925  RPC_2457  methyl-accepting chemotaxis sensory transducer  53.85 
 
 
665 aa  352  1e-95  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0375918  normal  0.509707 
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  51.33 
 
 
567 aa  349  9e-95  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  63.71 
 
 
716 aa  348  1e-94  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  67.6 
 
 
428 aa  345  2e-93  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  58.49 
 
 
561 aa  339  8e-92  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0061  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
674 aa  333  7.000000000000001e-90  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  54.78 
 
 
667 aa  332  2e-89  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  54.6 
 
 
681 aa  331  3e-89  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.64 
 
 
564 aa  330  4e-89  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0530  methyl-accepting chemotaxis protein  58.13 
 
 
569 aa  327  5e-88  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.667624  normal 
 
 
-
 
NC_007925  RPC_1709  methyl-accepting chemotaxis sensory transducer  52.21 
 
 
568 aa  327  6e-88  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.55655  normal  0.12205 
 
 
-
 
NC_007958  RPD_1025  methyl-accepting chemotaxis sensory transducer  52.67 
 
 
681 aa  325  2e-87  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  53.28 
 
 
689 aa  324  3e-87  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_007958  RPD_3581  methyl-accepting chemotaxis sensory transducer  50.13 
 
 
567 aa  322  1.9999999999999998e-86  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0981346  normal  0.985512 
 
 
-
 
NC_011004  Rpal_0233  methyl-accepting chemotaxis sensory transducer  58.06 
 
 
563 aa  307  4.0000000000000004e-82  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5144  methyl-accepting chemotaxis sensory transducer  52.12 
 
 
686 aa  307  4.0000000000000004e-82  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1197  chemotaxis sensory transducer  39.35 
 
 
688 aa  306  7e-82  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  43.71 
 
 
562 aa  306  9.000000000000001e-82  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  36.42 
 
 
688 aa  305  2.0000000000000002e-81  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_009485  BBta_7334  putative methyl-accepting chemotaxis protein  37.32 
 
 
685 aa  304  3.0000000000000004e-81  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.382599  normal 
 
 
-
 
NC_009485  BBta_4739  methyl-accepting chemotaxis sensory transducer  62.13 
 
 
450 aa  302  1e-80  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1716  methyl-accepting chemotaxis sensory transducer  49.49 
 
 
564 aa  303  1e-80  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0822312  normal  0.62395 
 
 
-
 
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