| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2908 |
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| Symbol | |
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| ID | 5153737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3023006 |
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| End bp | 3024691 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640557787 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001238941 |
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| Protein GI | 148254356 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.07018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAGA ACCTGCCCAT CACCAATGTC GAGTATCCGA TCTCCGACGA TACTCTGATC
GTCTCGAAGA CCGACACCAA GGGCAAGCTG ACGTTCTTCA ATGAGGACTT TGTCAAGGCG
GCCGGCTTCA CCGAGACGGA GCTGATGGGG CAGCCGCACA ACATCGTGCG CCATCCTGAC
ATGCCGCCCG AGGCGTTCGA CAATCTCTGG ACCACGCTGA AGGCGAAGCG CCCCTGGGTC
GGCGCGGTCA AGAACCGCCG CAAGAATGGC GATTATTACT GGGTCCTGGC GACGGCCTCG
CCGATCTGCA AGGACGGCCA AGTCGTCGGC TACACGTCGG TGCGCACCAA GCTGCCGTCC
GACCAGCGTA CCGAGGCCGA GCAGGTCTAC GCCGCGATTC GCGAGAACAA GCCGCACAAC
TACAAGATCG AGGACGGCAT CATTCGCCGC CGTTCGGTGT TCGACCACCT CGCGATGTTC
ACCGGCACCA TTGCCGCCCG GCTGCGGACG CTGGTCGCGC TGCAGACGCT GTTTCTGATC
GTGCTGGGCG CGATGTCCTT CGGTGCGGGC GGCGGCATGA CGGCCGCGGC GATTGCGGCT
CTCGGTGTCG TGCTCTGCGG CCTGGTCGGC TATCGTACGA TGAGCGTCAT CGTCGGTCCG
CTCGATCATG TCAACGAGAC GATGGAGGCC ATCACCCAGG GCAAGCTCGA CACCCGCATG
CGCATCGAGC GCGACGACGA GATCGGCCGC GCCTTGCGCA ACCTGCAGAC CGTGCAGACG
ATGGTGCGCT TCAACGCCCG GGAGCTCAAG GAGCAGGAAC AGCGCGCCGC TTCGCTGCGC
AAGCAGGAGA TGTCCAAGCT CGCCGACAGT TTCGAGGGAG CCGTCGGCAA TATCGTCGAG
ACCGTGTCCT CGGCCTCGAA CGAGCTCGAG AGCTCGGCGA ACTCGCTGTC GGGCACCGCG
ATGCGGGGCC AGGAGCTTTC GACGGCTGTT GCTGCGGCGT CCGAGGAGGC GTCGGCAAAC
GTTCAGGCGG TCGCGTCGGC GACCGAAGAG CTCACGTCGT CGGTGAAGGA GATCAGCCGC
CAGGTGCAGG AGTCCGCGCG CATCGCGTCC GATGCCGTCG ATCAGGCGCG TCGCACCAAT
GACCGCGTGG GCGAGCTGTC GCGGGCTGCG ACCCGCATCG GCGACGTCGT CGAACTGATC
AACACCATCG CAGGCCAGAC CAATTTGCTG GCCCTGAACG CGACCATCGA GGCGGCGCGC
GCCGGTGAAG CGGGCCGCGG CTTTGCGGTC GTGGCGTCCG AAGTCAAGGC GCTGGCTGAG
CAGACAGCCA AGGCCACCGG CGAGATCGCG CAGCAGATCT CGGGGATCCA GGCTGCGACG
CAGGAATCGG TCGGCGCCAT CCGGGAGATT TCGACGACGA TCGAACGGCT GTCCGAGATC
GCGGCCACCG TCGCCGCCGC AGTGGAGCAG CAGGGCGCGG CGACCTCCGA GATCTCTCGC
AACATTCAGC ACGCTGCGAC CGGGACCCAG GAGGTCTCGT CCAACATCAC AGACGTCCAG
CGCGGCGCAA GCGAGACCGG GGACACATCG AACCAGGTGC TCAACGCAGC GCGCCAGCTC
TCCGAGGATA GTCATCGCCT CAAGCAGGAG GTCAGCCGCT TCCTGCAATC GGTTCGCGCC
GCCTGA
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| Protein sequence | MRKNLPITNV EYPISDDTLI VSKTDTKGKL TFFNEDFVKA AGFTETELMG QPHNIVRHPD
MPPEAFDNLW TTLKAKRPWV GAVKNRRKNG DYYWVLATAS PICKDGQVVG YTSVRTKLPS
DQRTEAEQVY AAIRENKPHN YKIEDGIIRR RSVFDHLAMF TGTIAARLRT LVALQTLFLI
VLGAMSFGAG GGMTAAAIAA LGVVLCGLVG YRTMSVIVGP LDHVNETMEA ITQGKLDTRM
RIERDDEIGR ALRNLQTVQT MVRFNARELK EQEQRAASLR KQEMSKLADS FEGAVGNIVE
TVSSASNELE SSANSLSGTA MRGQELSTAV AAASEEASAN VQAVASATEE LTSSVKEISR
QVQESARIAS DAVDQARRTN DRVGELSRAA TRIGDVVELI NTIAGQTNLL ALNATIEAAR
AGEAGRGFAV VASEVKALAE QTAKATGEIA QQISGIQAAT QESVGAIREI STTIERLSEI
AATVAAAVEQ QGAATSEISR NIQHAATGTQ EVSSNITDVQ RGASETGDTS NQVLNAARQL
SEDSHRLKQE VSRFLQSVRA A
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