| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1871 |
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| Symbol | |
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| ID | 6409530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2010264 |
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| End bp | 2012414 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711759 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001990872 |
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| Protein GI | 192290267 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGAATA ACTTGCCTGT CACCGACGAC GAATACGTGC TCGACGACGG CACACTGATC
GTTTCGAAGA CGGACGTGAA AGGCAGGCTG ACGTATTTCA ACGAGCAGTT CGTCAAAGCG
TCTGGCTTCA GCGAGCAGGA ATTGATGGGG CAGCCGCACA ACATCGTGCG CCACCCCGAC
ATGCCGCCGG AGGCGTTCCA GAACCTGTGG GATACGCTCA AGGCGGGACG GCCATGGGTC
GGCGCGGTCA AGAACCGGCG CAAAAACGGC AGTTTCTATT GGGTGCTCGC CAGCGCCACG
CCGCTGTGGG AGAACGGCCA AGTCACCGGC TACATGTCGG TGCGGACCAA GCTGCCAGCC
GATCAGCGCG CCGAAGCCGA GCACGTCTAT GCCTTGCTGC GAAACAACAA TGCGCACGGC
TACAAGATCG ATGACGGCAT TATCCGGCGG CGGTCGTGGT TCGGCAGGCT CGGGATGTTC
ACCCGGACGC TGCGCTCGCG CCTGACCACC ATGGTGGCAG TGCAGGCGGT GATCATGATG
ATCATCGGCG CTGCCGGGAT CTACGCGGTC CACAACATGG ATCAGCGACT GCAGTCGGTT
TATGAGGATC GCGCCGTGCC GCTCGGACAG CTGACGGCGA TCAACGAGCG GCTGCTCGAT
GATGCGATGG CGCTGCGCGG CGCGGTGGTT CGCGCCAAGG TCGGCAAGCA GATCCGCGAC
GTTGCGGGGC GCATTGCCGC GAACCGCGAG CGTTCCGATA AGCTGTTTGC CGACTACACG
GCAACGCGGC TCACCGTAGG CGAAAAGGCG GTGGCCAGTG CGTTTTCTGC CGCTCGGCAA
GCTTACTTCG ACGAGGTGGT CGGCCCGGGC GTCGGCATGG TCGCGGCCCG GGAATTCGAC
CGGCTCGGCG AGTTGATGAC CGGTCGTGCG GAAGACCTGT TCAGGGCGGC GAAGACCGAA
TTGGATAAGC TGGTCGCCCT GCAGGTTCAG GGCGCGCGCG ATGAGTATTC CAGTGGTCAG
CGGGAATACG TCACGATGCT GGCGATCTCG ATCACGTTGC TGGTGATCGG AGTGTTTCTC
GGCGTCCTGA ACGGCGTGTT CACGACCCGG GCAATCACCG TTCCGCTGCA GCGTCTCGAC
ATGGTGATGA GCAACATCGC CCAGGGCAAG TTTGACAGCC GTGTCGTGAT CGAACGCGAT
GACGAGGCCG GCGTTGCGCT GCGCAACATT CAGGCGATGC AGAACCAGTT GTTCTTCAGC
CGCGAGGAAG AAAAGGACGC CGCCCAGCGC ACCGCCCTGC AGCGCAAGCT GGATATGCTC
CAGCTCGCCA ATGAGTTCGA AGCGGCAGTC GGGGAGATCA TCGAAACTGT TTCGTCGGCG
TCGACCGAGC TCGAAGCCTC GGCCAGTTCG TTGACGTCGA CTGCGGAACG CTCCCGGGAG
CTGACCGTCA CGGTCGCTGC GGCGTCCGAG CAGGCGGCCT CGAATGTACA GTCGGTGGCT
TCGGCCACCG AGCAGATGTC GTCGTCGGTC AGCGAAATCA GCCGCCAGGT GCAGGAGTCG
GCGCGGATCG CGGTCGAGTC CGTCAACCAG GCGCGACACA CCAACGATCG CGTGAGCGAG
CTGTCGCAGG CCGCTGGGCG GATCGGCGCG GTGGTCGAAC TGATCAACAA CATCGCCGGC
CAGACCAACC TGCTCGCGCT CAACGCCACC ATCGAGGCGG CGCGGGCCGG CGAAGCCGGT
CGCGGCTTTG CGGTGGTCGC GCAGGAGGTG AAGATCCTGG CCGAGCAGAC CGCCAAGGCG
ACCGGCGATA TCAGCCAGCA GATCTCTGGC ATCCAGGCGG GCACCGAGGA GTCCGTCGCC
GCGATCCGTC AGATCGGTAT CACCATCGAC CGGATGGCGG AGATCGCGTC CACGGTGGCG
TCGGCGGTCG AGGAGCAGGG TGCTGCGACG CAAGAAATCG CCCGCAACGT TCAGCAGGCC
GCACACGGCA CCATCCAGGT GAGTTCGAAC ATCGCCAGCG TCCGCCAGGG CGCTGCCGAG
ACCGGATCGG CGTCGTCTCA GGTGCTGGCG GCGGCCCAGG CGCTGTCGCA CGACAGCAAC
CGGCTGAAGA CCGAGGTCAG TCGCTTCCTC AGCACGGTGC GGGCCGCCTA A
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| Protein sequence | MRNNLPVTDD EYVLDDGTLI VSKTDVKGRL TYFNEQFVKA SGFSEQELMG QPHNIVRHPD
MPPEAFQNLW DTLKAGRPWV GAVKNRRKNG SFYWVLASAT PLWENGQVTG YMSVRTKLPA
DQRAEAEHVY ALLRNNNAHG YKIDDGIIRR RSWFGRLGMF TRTLRSRLTT MVAVQAVIMM
IIGAAGIYAV HNMDQRLQSV YEDRAVPLGQ LTAINERLLD DAMALRGAVV RAKVGKQIRD
VAGRIAANRE RSDKLFADYT ATRLTVGEKA VASAFSAARQ AYFDEVVGPG VGMVAAREFD
RLGELMTGRA EDLFRAAKTE LDKLVALQVQ GARDEYSSGQ REYVTMLAIS ITLLVIGVFL
GVLNGVFTTR AITVPLQRLD MVMSNIAQGK FDSRVVIERD DEAGVALRNI QAMQNQLFFS
REEEKDAAQR TALQRKLDML QLANEFEAAV GEIIETVSSA STELEASASS LTSTAERSRE
LTVTVAAASE QAASNVQSVA SATEQMSSSV SEISRQVQES ARIAVESVNQ ARHTNDRVSE
LSQAAGRIGA VVELINNIAG QTNLLALNAT IEAARAGEAG RGFAVVAQEV KILAEQTAKA
TGDISQQISG IQAGTEESVA AIRQIGITID RMAEIASTVA SAVEEQGAAT QEIARNVQQA
AHGTIQVSSN IASVRQGAAE TGSASSQVLA AAQALSHDSN RLKTEVSRFL STVRAA
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