Gene Rpal_3598 details

Gene Information

• Locus tag: Rpal_3598
• ID: 6411274
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 3849672
• End bp: 3851690
• Gene Length: 2019 bp
• Protein Length: 672 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642713478
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001992573
• Protein GI: 192291968
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTCG ACCGCATTGG TAATAAGCTC GGTGCTGCAG GCTTGCTGGG CGTCGTCCTC 
GCCGGCGGGA TGCTGGCCAA TCAGTTCGTC GCCGAGCGCA AGATCGAAGC GGCCAATGTG 
CTCGCCGATG GGCAGCAGTA CATCAACGAG CATACGCTCG AAGCCAACAT CGCACTGCGG 
CGTATGCAGC TTGCGTTCCG CGATATCCGG CTGGCGAAGG CTCCGGCCGA CCTCGATAAG 
CCGGCGGCGT CGCTGGCGGA GATGATCGCC CGGATGTCGA AGGAGATCGA CAGCGCGGCC 
CAGCGCACGG TGAAGCAGGA GAACAAGGAT CGCCTCCTCC AGATCGCCGC GCTCAACAAG 
GACTACGAGA AGCAGGGAGC GGAGCTGATC AAGGCGACCC GGCAGATCTT CGAGATTACG 
GGCAAGCGCA ACGCGCTGAG CGGCGAATGG CGCAGCGCGC TCGATGCGAT CCGGACCTCG 
CCGGCGACCG CCGCCAATCG GCTCGCAACT GAAGCGATCC TCTACGAAGC AGATTCGCAC 
TTCAACGCGA TCCGCGCAGC GACCTGGCGC TTCAGCGCCA CCGGAGAGGA CAGCCAGAAG 
AAGGCGATCG ACACCCGGAC GAACGAGCTG AACGACACGC TGTCCCGGCT GCGAAGCGTC 
GTCACCGACA AATCGCTGAG CGACGAGATC GATCAGCTCG CCACCGCGGG CAAGACCTTC 
AACGACCTGA CGGCCGTCGC TCTGAAATCG GAAGCCGGCA AGCTCGAGAA TGCAGCCGCG 
GCACTCGGAA TCGCCAACCG GTCGGCGGAA CTGATGCGCG CGGCCGTGAA TGAATCGAGC 
AAGAATTATC GCGCCGCCAA GGACGATGCC GATGCCGTGC TGGTGCAGGC AAACCGGGTC 
AGCTTCGCGG TCGCGATCGT CGTGATGCTG GCGCTGATCG GTTCGGTGAT CTTCACCTTC 
GTCGGCGTCG CCCGTCCGCT GACCCGTCTC AACGGGGCGC TCAGTCGCAT TGCCGAAGGT 
GAACTCAACA CCGAGATTCC CGGCGCGACC CGCGGCGACG AAGTCGGCGA CATCGCCAAG 
ACCGTGGTGG TGATCAGCAA GAACGCCGAA CAGAAGGCGC GCGAGGAAGC CGAAGCCCAG 
GCCCGGCAGG AGCAGATCGC GGCGCAGCGG CGCAAGCAGG AGATGATCCA GCTCGCCGAC 
GGCTTCGAAT CCGCGGTCGG CGAAATCGTC GATACCGTGT CGTCGGCCTC GACCGAGCTC 
GAAGCGTCCG CGACGACGTT GACGAGCACC GCCGAGCGCG CCCAGGAGCT CACCACGATG 
GTGGCCGCAG CTTCGGAAGA AGCCTCGACC AACGTGCAGT CGGTGGCGTC CGCCACCGAG 
GAGCTGTCGT CCTCGGTCAA CGAGATCAGC CGACAGGTGC AGGACTCGGC GCGGATCGCC 
AACGACGCCG TCAGCCAGGC CCGCCTGACC AACGACCGCG TCAGCGAACT CTCCAAGGCG 
GCCGCCCGGA TCGGCGACGT CGTCGAACTG ATCAACACCA TCGCCGGCCA GACCAACCTG 
CTCGCCCTGA ATGCCACCAT CGAGGCGGCG CGGGCCGGCG AAGCCGGACG GGGGTTCGCC 
GTGGTGGCGT CGGAAGTCAA AGCCCTGGCC GAACAGACCG CCAAGGCCAC CGGCGACATC 
AGCCAGCAGA TCTCCAGCAT CCAGGGCGCC ACCAGCGAGT CGGTGAACGC GATCAGGGAC 
ATCAGCGCCA CCATCGAGAA GCTGTCGGAA ATCTCCTCGA CCATCGCCTC GGCGGTGGAA 
GAGCAAGGCG CGGCGACCCT GGAGATCTCC CGCAACGTGC AGCAGGCGGC GCAAGGAACG 
CACCAAGTGT CCTCGAACAT CACCGACGTG CAGCGCGGTG CCAGCGAGAC CGGCTCGGCC 
TCGTCGCAGG TGCTGTCCGC CGCCCAGTCG CTGTCCGCCG ACAGCAACCG GCTGAAGACC 
GAAGTCACCA AATTCCTCAA CACTGTCAGG GCCGCCTGA 

 

Protein sequence

MKFDRIGNKL GAAGLLGVVL AGGMLANQFV AERKIEAANV LADGQQYINE HTLEANIALR 
RMQLAFRDIR LAKAPADLDK PAASLAEMIA RMSKEIDSAA QRTVKQENKD RLLQIAALNK 
DYEKQGAELI KATRQIFEIT GKRNALSGEW RSALDAIRTS PATAANRLAT EAILYEADSH 
FNAIRAATWR FSATGEDSQK KAIDTRTNEL NDTLSRLRSV VTDKSLSDEI DQLATAGKTF 
NDLTAVALKS EAGKLENAAA ALGIANRSAE LMRAAVNESS KNYRAAKDDA DAVLVQANRV 
SFAVAIVVML ALIGSVIFTF VGVARPLTRL NGALSRIAEG ELNTEIPGAT RGDEVGDIAK 
TVVVISKNAE QKAREEAEAQ ARQEQIAAQR RKQEMIQLAD GFESAVGEIV DTVSSASTEL 
EASATTLTST AERAQELTTM VAAASEEAST NVQSVASATE ELSSSVNEIS RQVQDSARIA 
NDAVSQARLT NDRVSELSKA AARIGDVVEL INTIAGQTNL LALNATIEAA RAGEAGRGFA 
VVASEVKALA EQTAKATGDI SQQISSIQGA TSESVNAIRD ISATIEKLSE ISSTIASAVE 
EQGAATLEIS RNVQQAAQGT HQVSSNITDV QRGASETGSA SSQVLSAAQS LSADSNRLKT 
EVTKFLNTVR AA