Gene Rpal_3598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3598 
Symbol 
ID6411274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3849672 
End bp3851690 
Gene Length2019 bp 
Protein Length672 aa 
Translation table11 
GC content65% 
IMG OID642713478 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001992573 
Protein GI192291968 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTCG ACCGCATTGG TAATAAGCTC GGTGCTGCAG GCTTGCTGGG CGTCGTCCTC 
GCCGGCGGGA TGCTGGCCAA TCAGTTCGTC GCCGAGCGCA AGATCGAAGC GGCCAATGTG
CTCGCCGATG GGCAGCAGTA CATCAACGAG CATACGCTCG AAGCCAACAT CGCACTGCGG
CGTATGCAGC TTGCGTTCCG CGATATCCGG CTGGCGAAGG CTCCGGCCGA CCTCGATAAG
CCGGCGGCGT CGCTGGCGGA GATGATCGCC CGGATGTCGA AGGAGATCGA CAGCGCGGCC
CAGCGCACGG TGAAGCAGGA GAACAAGGAT CGCCTCCTCC AGATCGCCGC GCTCAACAAG
GACTACGAGA AGCAGGGAGC GGAGCTGATC AAGGCGACCC GGCAGATCTT CGAGATTACG
GGCAAGCGCA ACGCGCTGAG CGGCGAATGG CGCAGCGCGC TCGATGCGAT CCGGACCTCG
CCGGCGACCG CCGCCAATCG GCTCGCAACT GAAGCGATCC TCTACGAAGC AGATTCGCAC
TTCAACGCGA TCCGCGCAGC GACCTGGCGC TTCAGCGCCA CCGGAGAGGA CAGCCAGAAG
AAGGCGATCG ACACCCGGAC GAACGAGCTG AACGACACGC TGTCCCGGCT GCGAAGCGTC
GTCACCGACA AATCGCTGAG CGACGAGATC GATCAGCTCG CCACCGCGGG CAAGACCTTC
AACGACCTGA CGGCCGTCGC TCTGAAATCG GAAGCCGGCA AGCTCGAGAA TGCAGCCGCG
GCACTCGGAA TCGCCAACCG GTCGGCGGAA CTGATGCGCG CGGCCGTGAA TGAATCGAGC
AAGAATTATC GCGCCGCCAA GGACGATGCC GATGCCGTGC TGGTGCAGGC AAACCGGGTC
AGCTTCGCGG TCGCGATCGT CGTGATGCTG GCGCTGATCG GTTCGGTGAT CTTCACCTTC
GTCGGCGTCG CCCGTCCGCT GACCCGTCTC AACGGGGCGC TCAGTCGCAT TGCCGAAGGT
GAACTCAACA CCGAGATTCC CGGCGCGACC CGCGGCGACG AAGTCGGCGA CATCGCCAAG
ACCGTGGTGG TGATCAGCAA GAACGCCGAA CAGAAGGCGC GCGAGGAAGC CGAAGCCCAG
GCCCGGCAGG AGCAGATCGC GGCGCAGCGG CGCAAGCAGG AGATGATCCA GCTCGCCGAC
GGCTTCGAAT CCGCGGTCGG CGAAATCGTC GATACCGTGT CGTCGGCCTC GACCGAGCTC
GAAGCGTCCG CGACGACGTT GACGAGCACC GCCGAGCGCG CCCAGGAGCT CACCACGATG
GTGGCCGCAG CTTCGGAAGA AGCCTCGACC AACGTGCAGT CGGTGGCGTC CGCCACCGAG
GAGCTGTCGT CCTCGGTCAA CGAGATCAGC CGACAGGTGC AGGACTCGGC GCGGATCGCC
AACGACGCCG TCAGCCAGGC CCGCCTGACC AACGACCGCG TCAGCGAACT CTCCAAGGCG
GCCGCCCGGA TCGGCGACGT CGTCGAACTG ATCAACACCA TCGCCGGCCA GACCAACCTG
CTCGCCCTGA ATGCCACCAT CGAGGCGGCG CGGGCCGGCG AAGCCGGACG GGGGTTCGCC
GTGGTGGCGT CGGAAGTCAA AGCCCTGGCC GAACAGACCG CCAAGGCCAC CGGCGACATC
AGCCAGCAGA TCTCCAGCAT CCAGGGCGCC ACCAGCGAGT CGGTGAACGC GATCAGGGAC
ATCAGCGCCA CCATCGAGAA GCTGTCGGAA ATCTCCTCGA CCATCGCCTC GGCGGTGGAA
GAGCAAGGCG CGGCGACCCT GGAGATCTCC CGCAACGTGC AGCAGGCGGC GCAAGGAACG
CACCAAGTGT CCTCGAACAT CACCGACGTG CAGCGCGGTG CCAGCGAGAC CGGCTCGGCC
TCGTCGCAGG TGCTGTCCGC CGCCCAGTCG CTGTCCGCCG ACAGCAACCG GCTGAAGACC
GAAGTCACCA AATTCCTCAA CACTGTCAGG GCCGCCTGA
 
Protein sequence
MKFDRIGNKL GAAGLLGVVL AGGMLANQFV AERKIEAANV LADGQQYINE HTLEANIALR 
RMQLAFRDIR LAKAPADLDK PAASLAEMIA RMSKEIDSAA QRTVKQENKD RLLQIAALNK
DYEKQGAELI KATRQIFEIT GKRNALSGEW RSALDAIRTS PATAANRLAT EAILYEADSH
FNAIRAATWR FSATGEDSQK KAIDTRTNEL NDTLSRLRSV VTDKSLSDEI DQLATAGKTF
NDLTAVALKS EAGKLENAAA ALGIANRSAE LMRAAVNESS KNYRAAKDDA DAVLVQANRV
SFAVAIVVML ALIGSVIFTF VGVARPLTRL NGALSRIAEG ELNTEIPGAT RGDEVGDIAK
TVVVISKNAE QKAREEAEAQ ARQEQIAAQR RKQEMIQLAD GFESAVGEIV DTVSSASTEL
EASATTLTST AERAQELTTM VAAASEEAST NVQSVASATE ELSSSVNEIS RQVQDSARIA
NDAVSQARLT NDRVSELSKA AARIGDVVEL INTIAGQTNL LALNATIEAA RAGEAGRGFA
VVASEVKALA EQTAKATGDI SQQISSIQGA TSESVNAIRD ISATIEKLSE ISSTIASAVE
EQGAATLEIS RNVQQAAQGT HQVSSNITDV QRGASETGSA SSQVLSAAQS LSADSNRLKT
EVTKFLNTVR AA