Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1795 |
Symbol | |
ID | 3972060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1951779 |
End bp | 1953464 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637924908 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_531673 |
Protein GI | 90423303 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.432423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0230577 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCT CGAATGTGAA AATCCTCTAC AAGATTCTGG CCTGTCTCCT GCTGCTCAGC GTCGTGGTCG GTTGCGGCCT GTGGTACGCC ACCGCGAAGA TGACGGAGAT CGATCGGCTG TACGCCGAGA TGCTCGACAA GGACGTGCAG GGCATGAAGG CGAATTTCCG CGCCAACGCC CGGGCCTACA ATTTCGGCCG GCTGTCATGG GAGATCATCG CCGAGACCGA AGCGGCGGAC ATGCAGAAGA CCAGCCGCGA GATCGCGGCG AACCAAAAGG AGTTCGTCGA CTACATCGCC GTCGCCAAGA AGGCCCTGCC GGCCTATGCC GCGGACTTCG ACCAGGTGTC GCGGATGTTC GAGGACATCA TGACCAGGAA GTATCCGCCG ATCGAGAAGG CCGCGTTGGC CAACAACAAT GAGGAAGCCG CACGACTTGC CAAGGCCGCG GGCGCCGACA ACCAGGCGTT GCGCGATCGC ATGGCGCAGA TCACCGTCGC GCTCGACAAG GATCTGAACG CGCGCTCCGA TGCGGCGTCG GCCGACGTCG TCAGCACGAT CCGCACCACC TTCTTGACGG TCGGCGGCGC GTTCCTCGCG GTGTTGGCGC TGGCCTTTGC GATCGTGCAA TTCGGCATCG CCCGTCCGCT CGGCCAGCTG GTCACCGATC TGCAGGGTCT CGCCCGCGGC GAGGCGATCG AGATCGCCGG CACCGATCGC GGTGACGAAG TCGGCGAGAC CGCCAACGCC GTCAACGGCA TCAAGCTGAT GCTGGACGAG AAGGCCAAGC GCGAAGCCGC CGAAAAGGCC GACGCCGATC GCAAGCTCGA GGCCGAGCGC AAGGCGGCGA TGCACCAACT CGCCGATGCG TTCGAATCCG CCGTGGGCGA GATCGTCCAT ACGGTGTCGT CGGCCGCGAC CGAACTGGAA GCCTCGGCGA CGACGTTGAC GGCCACCTCG GCGCGCTCGC AGGAACGCAC CACCGCGGTG GCCGCGGCTT CCGAGCAAGC CTCGACCAAT GTGCAATCGG TGGCCTCGGC GACCGAGGAG ATGGCGTCGT CGGTGCACGA GATCAGCCGG CAGGTGCAGG AATCCGCACG GATCGCCAAT GACGCGGTCG AGCAGGCGCG CAAGACCAAC GCCAGCGTCA GCGACCTGAC CAACGCCGCG GCGCGGATCG GCGACGTCGT CGAACTGATC AACACCATCG CCGGGCAAAC CAACCTGTTG GCGCTCAACG CTACGATCGA GGCCGCCCGC GCCGGCGAAG CCGGCCGCGG CTTCGCGGTG GTTGCCTCTG AGGTCAAGGC GTTGGCCGAG CAGACCGCCA AAGCCACCGG CGAGATCAGC CAGCAGATCG CCGGGATCCA GGCCGCCACC GGCGAGTCGG TGACGGCGAT CAAGGAGATC GGCGGCACCA TCGCCAAGAT GTCGGAGATT TCCTCCACTA TCGCCTCGGC GGTCGAAGAG CAGGGCGCGG CGACGCAGGA AATCTCCCGC AACGTGCAGC AGGCGGCGCT CGGCACCCAG CAGGTGTCGT CGAACATCGT CGACGTGCAA CACGGCGTCA GCGAAACCGG CTCGGCCTCC AGCCAAGTGC TGTCGGCCGC GCAATCGCTG TCGCGCGACA GCAACCGCTT GCGGCTCGAG GTCGGCCGCT TCCTCGAAAC CGTGCGGGCG GCATAA
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Protein sequence | MKLSNVKILY KILACLLLLS VVVGCGLWYA TAKMTEIDRL YAEMLDKDVQ GMKANFRANA RAYNFGRLSW EIIAETEAAD MQKTSREIAA NQKEFVDYIA VAKKALPAYA ADFDQVSRMF EDIMTRKYPP IEKAALANNN EEAARLAKAA GADNQALRDR MAQITVALDK DLNARSDAAS ADVVSTIRTT FLTVGGAFLA VLALAFAIVQ FGIARPLGQL VTDLQGLARG EAIEIAGTDR GDEVGETANA VNGIKLMLDE KAKREAAEKA DADRKLEAER KAAMHQLADA FESAVGEIVH TVSSAATELE ASATTLTATS ARSQERTTAV AAASEQASTN VQSVASATEE MASSVHEISR QVQESARIAN DAVEQARKTN ASVSDLTNAA ARIGDVVELI NTIAGQTNLL ALNATIEAAR AGEAGRGFAV VASEVKALAE QTAKATGEIS QQIAGIQAAT GESVTAIKEI GGTIAKMSEI SSTIASAVEE QGAATQEISR NVQQAALGTQ QVSSNIVDVQ HGVSETGSAS SQVLSAAQSL SRDSNRLRLE VGRFLETVRA A
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