Gene RPC_4527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4527 
Symbol 
ID3972076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5053268 
End bp5055271 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content68% 
IMG OID637927638 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_534368 
Protein GI90425998 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.527831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCGA CGCTGCGGTT TCGCGGCAAG GTCACGCTCG GCTTTGCGGT GGTGCTCGGC 
ATCACCGCCA TCAGCATGGG CCTCGCCTAT CTCGGCTTCG AGCGGGTCTC CGCGGTGGTG
GTCGGCTATC GCACCAGCGT GCAGGAGTCC GATCTCGCCC GCAACATCGA TCGCGAACTG
ATCTCCTACC AGGCGCTGGC GCGGTATTAC GTGGTCACCG GCAAGGACGA CGACGCCAAG
GCGGCGCTGG CCGCGGAAGT CGCGTTGAAG GACGCCATCG ACGCCTCGCT GAAGGCCACC
AGCGACGCCG CGCGACGCGA CAAGGTGACC AGGCTATCGG CCGAGTTCGC CACCTTCACC
AAGGTGTTCG CCGACATTCT CGCGGTCAAG ACCGATAGCG CGAGCGTGAC GCAGAACCAA
TTGACCCGCG GCGGCACCAG CCTGCGCTAC AAGCTCGACG ATCTGGCCAG CATCGCCGCC
GACGAGGATC TGCCGGCGAT CGAACTCGGC GCCAAGCAGG TGTCCGGGCA ATATCTCGCG
GCCACCACGC TGGCGAACAC TTTCGTGATC AATTCCGACC GCACGGTGGC CGATAGCGCG
GTAGCGCGGC TGAAATTCGT CGAGAATTCG CTGCGCGCGA TCTCTACCAA CAACCAGTCC
GTCATCGACA AGCTGAAGGA AATCACCGAG CTGCTCGACG GTTACAAGCA GGCGCTGGCC
AAGCTGATCG AGAACTCCAA ATCGATCGAC GCGCTGCTGG CCAAGATGGT GGCCTCGGCG
AGCGCGATCA CCCAAAGCTC GGCGGCAATG AAGGCCGACC TGCTGGCGGA TCAGCAGCGC
TTGGAAACGG AGTCCGATGC CAGCGTCAGT TCCACCGAGC GGCTGGTGGC GATGCTCGGC
ATCGGCGGTT TCCTGCTCGG CGGCGTGCTG GCGATCCTGC TCGGCCGCGG CATCTCCCGG
CCGATGACGG CGATGTGCGT GGCGATGCGC AAGCTCGCCG GCGGCGATTT CGAGGTGGTG
CTGCCGGGGC TCGGCCGCAA CGACGAGATC GGCGAGATGG CCGCCGCGGT CGAGGAGTTC
AAGGTCCAGG CGGTCAGCAA GGCCGCGCGC GACGCCGAGG CTCAGGAAGC CCAGAGCACG
GCCGCCGCCG CGGCGCGGCG CGCCGAACTG ATCCGGTTCG CCGACGAATT CGAATCCGCG
GTCGGCGCCA TCGTGGCGCA CGTCTCGGCC TCCGCCGAGC AACTGGAGAC CGCGGCCGGC
ACCTTGACCC GCACCGCGGA AACCACGCAG AGCCTGTCCG GCGAGGTCGC CGGCGCGTCG
TCGGAGGCGT CCTCCAACAT GCAGTCGGTC GCCACCGCCA CCGAACAATT GTCCGCCTCG
GTCGGCGAGA TCGGCCGCCA GGTCACCGAA TCCAGCCGGA TCGCCGACGG CGCGGTGAGC
CAGGCCCGCG AGACCGACAG CCGGATCGGC AAATTGAGCC ACGCCGCGCA GCAGATCGGC
GACGTGGTGA AACTGATCAC CGCGATCGCC GAGCAGACCA ATCTGCTGGC CTTGAATGCA
ACCATCGAGG CCGCCCGCGC CGGCGAGTCC GGACGCGGCT TCGCCGTGGT GGCCTCCGAA
GTGAAGTCGC TGGCCAGCCA GACCGCCAAG GCCACCGAGG AGATCTCCGC GCAAGTCGCC
GAAATGCAGA GCGCGACGCA GGAATCGGTG GCGGCGATCA AACAGATCGG CGACACCATC
GGACAGATTT CGACCATCGC CTCGACCATC GCCAGCGCGG TGACCGAGCA GGGCACCGCG
ACCCGCGAGA TCGCCTCGAG CGTGCACAGC GTGGCGCAAG GCACCCAGCA GGTCGCCGGC
AACATCACCG CGGTCAACCG CGGCGCCGCC GAGACCGGCG CCGCCTCGGC GCAGGTGCTG
AATTCGGCGC AGAGCCTGTC GGCGGAAAGC GCGCGGCTGC GCGCCGAGCT CGACCGCTTC
ATGGCCACGA TCCGCGCGGC GTAG
 
Protein sequence
MLPTLRFRGK VTLGFAVVLG ITAISMGLAY LGFERVSAVV VGYRTSVQES DLARNIDREL 
ISYQALARYY VVTGKDDDAK AALAAEVALK DAIDASLKAT SDAARRDKVT RLSAEFATFT
KVFADILAVK TDSASVTQNQ LTRGGTSLRY KLDDLASIAA DEDLPAIELG AKQVSGQYLA
ATTLANTFVI NSDRTVADSA VARLKFVENS LRAISTNNQS VIDKLKEITE LLDGYKQALA
KLIENSKSID ALLAKMVASA SAITQSSAAM KADLLADQQR LETESDASVS STERLVAMLG
IGGFLLGGVL AILLGRGISR PMTAMCVAMR KLAGGDFEVV LPGLGRNDEI GEMAAAVEEF
KVQAVSKAAR DAEAQEAQST AAAAARRAEL IRFADEFESA VGAIVAHVSA SAEQLETAAG
TLTRTAETTQ SLSGEVAGAS SEASSNMQSV ATATEQLSAS VGEIGRQVTE SSRIADGAVS
QARETDSRIG KLSHAAQQIG DVVKLITAIA EQTNLLALNA TIEAARAGES GRGFAVVASE
VKSLASQTAK ATEEISAQVA EMQSATQESV AAIKQIGDTI GQISTIASTI ASAVTEQGTA
TREIASSVHS VAQGTQQVAG NITAVNRGAA ETGAASAQVL NSAQSLSAES ARLRAELDRF
MATIRAA