Gene RPB_2358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2358 
Symbol 
ID3909356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2711186 
End bp2713207 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content66% 
IMG OID637884255 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_485974 
Protein GI86749478 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.207811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAT TCGATCGAAT TGGTAACAAG CTCGGCCTGG CAGGCTTGCT GGGTGTGGTG 
TTGGCCGGCG GCATGCTGGT CAACCAGATG ATGGCCGAGC AAAAGATCGC GGCGGCCAAC
ACGCTCGCCG AGCGTCAGCA ATACATCAAC GAACACACGC TGGAAGCCAA CATCGCCTTG
CGGCGGATAC AGCTCGCGGT GCGCGATATC AGGCTCGCCA AGACTCCCGC CGAGCTCGAG
AAGCCGGTCG CAGCCCTGGC GGAGATGGCG GCGCGCACCC AGAAAGAACT CGAAGCAGCC
GCTGCGCGCG CCGCGCGGCC GGAGACCAAG CAACGGTTCG AGAAAATCAA GGCGCTCGCC
AAGGACTACG AAACGCAGGC ATCGGCGCAG GTCAAAACCA TCCAGCAAGC GTTCGCGATG
GCCGCCAAGC GGGGCCAAGT GACGAGCGAC TGGGGCAAGG CCTTCGAAGC CCTGAAGGCT
TCTCCGGCGA TCGCCGCGAG CCGCCTCGAG GTCGAGCGGG CGATGTACGA AGCGGATTCG
CACTTCAACG CGATCCGCGC GGCGAACTGG CGGTTTACCG CGAGCGGGGA AGACAGCCAG
AGGAAGGTCA TCGAACTCCG CGCCACCGCC CTGAACGATG CGCTGGCCCG GCTGCGCAAT
ATCTCCAACG ACAAGGCGCT GACCACAGCC GCCGACCAGC TCTCGGCCGA CGCCAAGACC
TTTGTCGGGA TGGCCAATGA CGCAGTGAAG CTCGACAGCA CCAGGAACGG GCAGTCGGCC
TCGATGCTGA CGATCGCCGA CCAGATGGGC CCATTGATGC GGGAAGCCGT CGACGCCTCC
AGCAACAGCT TCCGCACCGC CAAGGAGACC GCCGAAGCCG AGCTCGAGTC GGCCAACCGG
ATCAGCTTCA TGGCTGCCGT CGCCGTGATG CTGGCGCTGA TCGGCTCGGT GATCTTCACC
TTCATCGGCG TCGCCCGCCC GCTCACCCTG CTGAACAACG CGCTCGGCCG GATCGCGGCC
GGCGAACTCA ATGCCGATAT TCCCGGCGCA ACCCGCGGCG ACGAAGTCGG CGATATCGCC
AAGACCGTGG TGGTGATCAG CAAGAACGCC GAACAGAAGG CCCGCGACGA AGCCGAAGCC
CAGGCCAAGC AGGAGCAGAT CGCCGCGCAG CGTCGCAAGG CCGATATGAT CCAGCTCGCC
GACAGCTTCG AAGCCGCCGT CGGCGAGATC GTCGACACGG TGTCGTCGGC CTCGACCGAG
CTCGAAGCCT CGGCCTCGAC GCTGACGTCG ACCGCCGAAC GCTCGCAGGA ACTCACCACC
ATGGTGGCGG CGGCCTCTGA GGAAGCCTCC ACCAACGTGC AGTCGGTGGC CTCCGCGACC
GAGGAGCTGT CGTCCTCCGT CAACGAGATC AGCCGTCAGG TGCAGGAATC GGCGCGGATG
GCCAATGAGG CGGTCAACCA GGCACGCACC ACCAACGATC GCGTCGGCGA ACTGTCCAAG
GCCGCCGCCC GGATCGGCGA CGTCGTCGAA CTGATCAACA CCATCGCCGG CCAGACCAAC
CTGCTCGCGC TCAACGCCAC CATCGAGGCG GCGCGCGCCG GTGAAGCCGG TCGCGGCTTC
GCGGTCGTCG CCTCCGAAGT GAAAGCGCTG GCCGAGCAGA CCGCCAAGGC GACCGGCGAC
ATCAGTCAGC AGATCTCCAG CATCCAGACC GCCACCCAGG ACTCGGTGGG CGCGATCCGG
GATATCAGCG GCACCATCGA GAAACTGTCC GAGATCGCCT CCACCATCGC CTCGGCGGTC
GAAGAACAGG GCGCCGCGAC GCAGGAGATC TCCCGCAACG TGCAGCAGGC TTCGCAAGGC
ACGCAGCAGG TCTCCGCCAA CATCACCGAC GTGCAGCGCG GCGCCACCGA AACCGGCTCG
GCCTCGGCGC AAGTGCTCTC GGCGGCCCAA ACGCTCTCCA GCGACAGCAA CCGCCTCCGG
AGCGAAGTGG GCAAATTCCT CAGCACCGTC CGCGCCGCGT AA
 
Protein sequence
MMKFDRIGNK LGLAGLLGVV LAGGMLVNQM MAEQKIAAAN TLAERQQYIN EHTLEANIAL 
RRIQLAVRDI RLAKTPAELE KPVAALAEMA ARTQKELEAA AARAARPETK QRFEKIKALA
KDYETQASAQ VKTIQQAFAM AAKRGQVTSD WGKAFEALKA SPAIAASRLE VERAMYEADS
HFNAIRAANW RFTASGEDSQ RKVIELRATA LNDALARLRN ISNDKALTTA ADQLSADAKT
FVGMANDAVK LDSTRNGQSA SMLTIADQMG PLMREAVDAS SNSFRTAKET AEAELESANR
ISFMAAVAVM LALIGSVIFT FIGVARPLTL LNNALGRIAA GELNADIPGA TRGDEVGDIA
KTVVVISKNA EQKARDEAEA QAKQEQIAAQ RRKADMIQLA DSFEAAVGEI VDTVSSASTE
LEASASTLTS TAERSQELTT MVAAASEEAS TNVQSVASAT EELSSSVNEI SRQVQESARM
ANEAVNQART TNDRVGELSK AAARIGDVVE LINTIAGQTN LLALNATIEA ARAGEAGRGF
AVVASEVKAL AEQTAKATGD ISQQISSIQT ATQDSVGAIR DISGTIEKLS EIASTIASAV
EEQGAATQEI SRNVQQASQG TQQVSANITD VQRGATETGS ASAQVLSAAQ TLSSDSNRLR
SEVGKFLSTV RAA