Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2358 |
Symbol | |
ID | 3909356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 2711186 |
End bp | 2713207 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637884255 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_485974 |
Protein GI | 86749478 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.207811 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAT TCGATCGAAT TGGTAACAAG CTCGGCCTGG CAGGCTTGCT GGGTGTGGTG TTGGCCGGCG GCATGCTGGT CAACCAGATG ATGGCCGAGC AAAAGATCGC GGCGGCCAAC ACGCTCGCCG AGCGTCAGCA ATACATCAAC GAACACACGC TGGAAGCCAA CATCGCCTTG CGGCGGATAC AGCTCGCGGT GCGCGATATC AGGCTCGCCA AGACTCCCGC CGAGCTCGAG AAGCCGGTCG CAGCCCTGGC GGAGATGGCG GCGCGCACCC AGAAAGAACT CGAAGCAGCC GCTGCGCGCG CCGCGCGGCC GGAGACCAAG CAACGGTTCG AGAAAATCAA GGCGCTCGCC AAGGACTACG AAACGCAGGC ATCGGCGCAG GTCAAAACCA TCCAGCAAGC GTTCGCGATG GCCGCCAAGC GGGGCCAAGT GACGAGCGAC TGGGGCAAGG CCTTCGAAGC CCTGAAGGCT TCTCCGGCGA TCGCCGCGAG CCGCCTCGAG GTCGAGCGGG CGATGTACGA AGCGGATTCG CACTTCAACG CGATCCGCGC GGCGAACTGG CGGTTTACCG CGAGCGGGGA AGACAGCCAG AGGAAGGTCA TCGAACTCCG CGCCACCGCC CTGAACGATG CGCTGGCCCG GCTGCGCAAT ATCTCCAACG ACAAGGCGCT GACCACAGCC GCCGACCAGC TCTCGGCCGA CGCCAAGACC TTTGTCGGGA TGGCCAATGA CGCAGTGAAG CTCGACAGCA CCAGGAACGG GCAGTCGGCC TCGATGCTGA CGATCGCCGA CCAGATGGGC CCATTGATGC GGGAAGCCGT CGACGCCTCC AGCAACAGCT TCCGCACCGC CAAGGAGACC GCCGAAGCCG AGCTCGAGTC GGCCAACCGG ATCAGCTTCA TGGCTGCCGT CGCCGTGATG CTGGCGCTGA TCGGCTCGGT GATCTTCACC TTCATCGGCG TCGCCCGCCC GCTCACCCTG CTGAACAACG CGCTCGGCCG GATCGCGGCC GGCGAACTCA ATGCCGATAT TCCCGGCGCA ACCCGCGGCG ACGAAGTCGG CGATATCGCC AAGACCGTGG TGGTGATCAG CAAGAACGCC GAACAGAAGG CCCGCGACGA AGCCGAAGCC CAGGCCAAGC AGGAGCAGAT CGCCGCGCAG CGTCGCAAGG CCGATATGAT CCAGCTCGCC GACAGCTTCG AAGCCGCCGT CGGCGAGATC GTCGACACGG TGTCGTCGGC CTCGACCGAG CTCGAAGCCT CGGCCTCGAC GCTGACGTCG ACCGCCGAAC GCTCGCAGGA ACTCACCACC ATGGTGGCGG CGGCCTCTGA GGAAGCCTCC ACCAACGTGC AGTCGGTGGC CTCCGCGACC GAGGAGCTGT CGTCCTCCGT CAACGAGATC AGCCGTCAGG TGCAGGAATC GGCGCGGATG GCCAATGAGG CGGTCAACCA GGCACGCACC ACCAACGATC GCGTCGGCGA ACTGTCCAAG GCCGCCGCCC GGATCGGCGA CGTCGTCGAA CTGATCAACA CCATCGCCGG CCAGACCAAC CTGCTCGCGC TCAACGCCAC CATCGAGGCG GCGCGCGCCG GTGAAGCCGG TCGCGGCTTC GCGGTCGTCG CCTCCGAAGT GAAAGCGCTG GCCGAGCAGA CCGCCAAGGC GACCGGCGAC ATCAGTCAGC AGATCTCCAG CATCCAGACC GCCACCCAGG ACTCGGTGGG CGCGATCCGG GATATCAGCG GCACCATCGA GAAACTGTCC GAGATCGCCT CCACCATCGC CTCGGCGGTC GAAGAACAGG GCGCCGCGAC GCAGGAGATC TCCCGCAACG TGCAGCAGGC TTCGCAAGGC ACGCAGCAGG TCTCCGCCAA CATCACCGAC GTGCAGCGCG GCGCCACCGA AACCGGCTCG GCCTCGGCGC AAGTGCTCTC GGCGGCCCAA ACGCTCTCCA GCGACAGCAA CCGCCTCCGG AGCGAAGTGG GCAAATTCCT CAGCACCGTC CGCGCCGCGT AA
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Protein sequence | MMKFDRIGNK LGLAGLLGVV LAGGMLVNQM MAEQKIAAAN TLAERQQYIN EHTLEANIAL RRIQLAVRDI RLAKTPAELE KPVAALAEMA ARTQKELEAA AARAARPETK QRFEKIKALA KDYETQASAQ VKTIQQAFAM AAKRGQVTSD WGKAFEALKA SPAIAASRLE VERAMYEADS HFNAIRAANW RFTASGEDSQ RKVIELRATA LNDALARLRN ISNDKALTTA ADQLSADAKT FVGMANDAVK LDSTRNGQSA SMLTIADQMG PLMREAVDAS SNSFRTAKET AEAELESANR ISFMAAVAVM LALIGSVIFT FIGVARPLTL LNNALGRIAA GELNADIPGA TRGDEVGDIA KTVVVISKNA EQKARDEAEA QAKQEQIAAQ RRKADMIQLA DSFEAAVGEI VDTVSSASTE LEASASTLTS TAERSQELTT MVAAASEEAS TNVQSVASAT EELSSSVNEI SRQVQESARM ANEAVNQART TNDRVGELSK AAARIGDVVE LINTIAGQTN LLALNATIEA ARAGEAGRGF AVVASEVKAL AEQTAKATGD ISQQISSIQT ATQDSVGAIR DISGTIEKLS EIASTIASAV EEQGAATQEI SRNVQQASQG TQQVSANITD VQRGATETGS ASAQVLSAAQ TLSSDSNRLR SEVGKFLSTV RAA
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