| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1080 |
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| Symbol | |
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| ID | 4031608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1214300 |
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| End bp | 1216396 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637969578 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_576388 |
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| Protein GI | 92116659 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0139762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCGA AGATCAGCGT TACTCTGCCT GCTATCATCT CCGCGCTCGT CCTGATAGGC
GCCCTTGCCG CCGGAATGGC GGCGTACCAA GCGTACGAAC TGCGACAGAA ATCCGAAGCA
TTTCTCGAAG TGAACCATAT CTCGCAGTTG CTGTTACGAA GCGCCGGGCA ATGGGCGGTC
GAGCGCGGGC TCACGAACGC GCCGCTGAAG TCGCCCGATG CCCTGCCTAC CGAACTCCGT
CCCCAGATCG TCAACACTCG GCAAACCGCC GATCGCGCAT TTTCGGAGGC CGCTCAACTG
TTGCACGGGA TTCCGGCGAT GAAATCCGCA CAGACGCAAC TTTCGGAGGC CGAGAGCACG
TTCCAGTCGT TCGTCGGTTT TCGCACGAGG CTCGATGAGA ATCTTCCCAA ACGGGGATCG
GAACGGAGCC CGGAGGTCGT CGAGGGCTTC TCACCGGCAA TCACCAAGCT GATCGACGTC
TCCGGCAACA GGCTGCGACT GACATTGGAA ACGCTGACCC GTCCGCCTAC CGCGGCTCTG
ACGCAATTGG TCAGCGTACG TAATTTGACT GCGCAGATGG CCGAGAACGC CGGGAGAGAA
CGTGCGTTGG TCGGAGGGAT CGTCGGCTCC CGCGCCAAGA TCTCCACGAG CAGCTTCCGG
ACCATCGCTC GTTTCCGCGG AAATGTAGAG TTGGCATGGG AAACGATCTC ACCGCTGCGG
ATGCGCACCG ACTTGCCGAA AAAAGTCACG GATGCGATCT CGGGCGTCGA GAAGGACTAT
TTCCAGACCT ATGGCCAGAC ACGCGACGGC GTGTTCGCGA CAGCCGAGAC GGGTGAGTAC
ACGATCAGCG GCAACGACTA TGTTGCGCGG GCGACCACCG CGATCAATTC GATCCTTCGG
CTGGCCGATG CGGTCGGTGA AGCGGCCGAT CAAGAAGCTA CAAACGAAGC CGCAAACAGC
ACGTCCAAAC TGCTCATTGC CGGATTGATA TTGCTCGGCT GTATCGCTCT CGCGCTGATC
AGCTTCTGGA TTGCGTTCTC GCGGATCCTG CGACCGCTGT CTGCGCTGAC CGGAGCGATG
GGTGAACTCG CGAAAGGCAA TTTTGCCGTG GTCCTGCCTG GACTCGACCG CAAGGACGAG
ATGGGCGACA TGGCGCGTGC GGTCGAGACC TTCAAAGTCA AGGCCGAGCA GAAAGCGCGC
GACGAAGCGG AAGCCAAGAT GCAGCAGGAT CAACTTGCCG CCCAACAGCG CAAGGCGGAC
ATGCACAGGC TAGCCGACAG TTTCGAGGCG GCGGTCGGCG AAGTGATCCA GACGGTATCC
TCGGCAGCAA CCCAACTCGA AGGCTCGGCG ACCTCGCTGA CCCGGACAGC CGAACAGACC
CATCAGCTTT CATCCGCTGT GGCCGCGGCC TCCGAGGAAG CAACGGTCAA TGTTCAGTCC
GTGGCCTCGG CCAGCGAGGA GATGGCCGCG TCCGTCACCG AAATCAGCCG GCAGGTCCAG
GAAGCGTCGA GGATCGCGAG CGACGCGGCG CAAAAGGCGC ATAGCGCCGA CCAGCGGATC
ACTTCGCTGT CGCAGGCATC CACCAAGATC GGAGACGTGG TTGAACTCAT CAACACGATT
GCCAGCCAGA CGAACCTCCT GGCGCTCAAC GCAACCATCG AGGCCGCTCG CGCCGGCGAG
GCCGGCCGCG GCTTCGCCGT CGTGGCGTCC GAGGTGAAGG CTCTGGCCGA GCAGACCGCC
AAGGCGACCG CCGAAATCGG CCAGCAGATC ACGAACATCC AGGCGGCGAC GGATGACTCC
GTCGTTAACG TGAAAGAAAT CGGCGTTGTC ATCGGCAGGA TTGCGGAGAT CTCCGCGACG
ATCGCCTCGG CAGTCGAAGA GCAAGCGTCT GCAACTCAGG AAATATCCCG CAACGTTCAG
CAGGCAGCGG CCGGAACCTC GGAAGTTTCC TCCAATATTA TCGAGGTCAG CAACGGAGCG
TCCGAAACCG GTGGCGCCTC TACACAAGCC CTGGCAGCGG CAAAGACTCT GGCCGGCAAT
ACCGATCGCC TCAAGCTGGA GGTCGAAAAG TTCCTCGCAA CGGTCAGAGC CGCCTAA
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| Protein sequence | MKAKISVTLP AIISALVLIG ALAAGMAAYQ AYELRQKSEA FLEVNHISQL LLRSAGQWAV
ERGLTNAPLK SPDALPTELR PQIVNTRQTA DRAFSEAAQL LHGIPAMKSA QTQLSEAEST
FQSFVGFRTR LDENLPKRGS ERSPEVVEGF SPAITKLIDV SGNRLRLTLE TLTRPPTAAL
TQLVSVRNLT AQMAENAGRE RALVGGIVGS RAKISTSSFR TIARFRGNVE LAWETISPLR
MRTDLPKKVT DAISGVEKDY FQTYGQTRDG VFATAETGEY TISGNDYVAR ATTAINSILR
LADAVGEAAD QEATNEAANS TSKLLIAGLI LLGCIALALI SFWIAFSRIL RPLSALTGAM
GELAKGNFAV VLPGLDRKDE MGDMARAVET FKVKAEQKAR DEAEAKMQQD QLAAQQRKAD
MHRLADSFEA AVGEVIQTVS SAATQLEGSA TSLTRTAEQT HQLSSAVAAA SEEATVNVQS
VASASEEMAA SVTEISRQVQ EASRIASDAA QKAHSADQRI TSLSQASTKI GDVVELINTI
ASQTNLLALN ATIEAARAGE AGRGFAVVAS EVKALAEQTA KATAEIGQQI TNIQAATDDS
VVNVKEIGVV IGRIAEISAT IASAVEEQAS ATQEISRNVQ QAAAGTSEVS SNIIEVSNGA
SETGGASTQA LAAAKTLAGN TDRLKLEVEK FLATVRAA
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