| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4407 |
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| Symbol | |
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| ID | 3970422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4913239 |
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| End bp | 4914939 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927516 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_534249 |
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| Protein GI | 90425879 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.365939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGC TGAACAATTT CAAGATTACA TTCAAGATCG TGCTGATCGT TACGTTGATG
GCGATGCTGA CGATCGGCGT GGCGAGTTTC GCGTCCGTCC GCTTGAAAGC CGTCGATGAA
AATTACACGG ATCTGGTGGA TCGGGTCGGC AAGTTCACCT CGATGACCCT GCTTGCCTCC
AGCCAGGCCA ACGCCTATAT CGCCGCGACG TTTCAATTGG CGGTGGAAAC CACCGACGCC
GGCAATACCA AGTACCTCGG CGCGCTTGGC GACAGCCGCA AGGCTTACGA GACGATGATC
GCCCAGGTGC AGCGCGGCCT GCCGGAGCGG GCCGCGCTGA TCGAGCCGGT CGCCGCGAAA
TTTTACAGCG CCTTCGGTGC TTGCGCCCCG GTAATCGATT TTGCGTCGAA GACCACTTCG
CCGGAGGGCG CCCTGAAGGC CGCGGCTCGG CTGCAGGCCG AATGCGTCCC CTTGATCGAA
TCCGCGATCG CGGCGCAGAC CAAGCTGGTC GAGGCGCTGC TGCTGGCTGC CGCGAAAGGG
TCCGACCAAT TGACCGTGGA TACCAACTCC GCGGTGATGA CGGTGCTGGC CGCCAGTGCG
GTTGGTTTGC TGGTGATCTT TGCGCTGGCG ATGTGGATCG GCATTAAGGG AATGGCGCAA
CCGATCGGCC AGTTGAAGGT CGTGATGGAA GCCTTCGCCC GCAACGATCT CACCGCCGAC
GTTCCCAGCA AGGAGCGCCG CGACGAGATC GGCGAGATGG CCCGCACCGT CGAGGTGTTC
AAGACCAACG GCCTCGAAGT CGAACGGTTG AAGCAGGAGC AGATCGTGGC CGAACAGAGC
GCGATCACGG TGCGCAAGAC CGAGATGAAC AAGCTGGCCC ATGATTTCGA AAGCGCGGTC
GGCGAGATCA TTCAGACCGT GTCGTCGGCG GCGACCGAGT TGGAAGCCTC CGCCACCACT
TTGTCGGCGA CGTCCGAGCG CGCCGAGCAA CTCACCACGG TGGTCGCCGC GGCTTCGGAA
GAAGCCTCCA CCAATGTGCA GTCGGTGGCT TCGGCCACCG AGGAGATGAG CTCGTCGGTC
AACGAGATCA GCCGCCAGGT GCAGGAATCC TCGCGCATTG CCAACGAGGC GGTGCAGCAG
GCGCAGAAGA CCAACGACCG GGTCGGCGAA CTGGCCAAGG CGGCGGCGCG GATCGGCGAC
GTCGTCGAAC TGATCAACAC CATCGCCGGG CAGACCAACC TGTTGGCGTT AAACGCCACG
ATCGAGGCGG CCCGCGCCGG CGAGGCCGGT CGCGGTTTCG CGGTGGTCGC CTCCGAGGTG
AAAGCGCTCG CCGAGCAGAC CGCGAAGGCG ACCGGCGAGA TCGGCCAGCA GATCACCGGC
ATTCAGGCCG CCACCCAGGA ATCGGTCGGT GCGATCCGGG AAATCGGCGA CACTATCGGC
AAGATGTCGG AGATCGCCGC CACCATTGCC TCCGCGGTGG AAGAGCAGGG CGCCGCCACC
CAGGAAATCT CCCGCAACGT GCAGCAGGCG GCGCTGGGCA CCCAGCAGGT CAGTTCCAAC
ATCACCGACG TGCAGCGCGG CGCCTCCGAG ACCGGTTCGG CCTCCTCGCA GGTACTGTCG
GCGGCACAGA CGTTGTCGCG CGACAGCAGC CGGCTGAGGC AGGAAGTCAG CAAGTTCATG
GACACCGTGC GCGCCGCTTA A
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| Protein sequence | MSLLNNFKIT FKIVLIVTLM AMLTIGVASF ASVRLKAVDE NYTDLVDRVG KFTSMTLLAS
SQANAYIAAT FQLAVETTDA GNTKYLGALG DSRKAYETMI AQVQRGLPER AALIEPVAAK
FYSAFGACAP VIDFASKTTS PEGALKAAAR LQAECVPLIE SAIAAQTKLV EALLLAAAKG
SDQLTVDTNS AVMTVLAASA VGLLVIFALA MWIGIKGMAQ PIGQLKVVME AFARNDLTAD
VPSKERRDEI GEMARTVEVF KTNGLEVERL KQEQIVAEQS AITVRKTEMN KLAHDFESAV
GEIIQTVSSA ATELEASATT LSATSERAEQ LTTVVAAASE EASTNVQSVA SATEEMSSSV
NEISRQVQES SRIANEAVQQ AQKTNDRVGE LAKAAARIGD VVELINTIAG QTNLLALNAT
IEAARAGEAG RGFAVVASEV KALAEQTAKA TGEIGQQITG IQAATQESVG AIREIGDTIG
KMSEIAATIA SAVEEQGAAT QEISRNVQQA ALGTQQVSSN ITDVQRGASE TGSASSQVLS
AAQTLSRDSS RLRQEVSKFM DTVRAA
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