Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0497 |
Symbol | |
ID | 4020965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 571384 |
End bp | 573117 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637960684 |
Product | chemotaxis sensory transducer |
Protein accession | YP_567636 |
Protein GI | 91974977 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGCGT CTTCTCACAG CGCACTGGAA CCGTCCTCGA TGAAAATCCG GATCACAATT TCGGCGATGA TCGTGCTTTT CGGCGTAATC ACCGCGATCG GCCTTGCCGC GATGCTGGCC ACCAGCACGT TCGCACTCAA GCAATTGCGC GTCGGCGGGC CGCTGTATTC GCAGATCCAG CTCGGCAACG ATCTCGTCGC CGATATTCTG CCGCCTCCGG CTTACGTCAT CGAAGCCTAT CTGGAAGCGA CGCTGGCGCT ACGCAAACCG TCGGAACTGG CCGCCCACCA GGCGAGACTG GCGCAGCTTC ACAAGAGCTA TTCGGAACGC AAGGACTATT GGTCGTCGAA ATCCGAACTC GATCCGTCGG TCAAGAAGAG ACTGACGGTC GATTCCGACG CCGAGGTCCA GAAGTTCTGG AAGGTCGCCG AGCAGGACAT GATCCCCGCT TTGAGCAAGG GCGACAAGGC CCGCGCCGAA GCGGCGTATG CAGAGCTCGA AACGATCTAT CAGGCTCATC GCAGCATCAT CGACGACATC GTCAAGAAGG CCAACAACGA GAATTCCGAG CTCGAAAAAG TCGCCGCAAC GCAGGTCGAC TCCTATTCGA TGGTGACCTG GGTGGTTTCC GGCCTGGTGG TGACGCTGAT CGTTCTGGGT GTTCTGGGAA TCGCAATCGG CCTGGTGCGT CCGGTCGTTC GCCTGACATC CGCGCTCGAG GAGATGGCCG GCGGCAATCT CGACGTCGCG ATCCCGGGAG CCGGCCGCGG CGACGAGATC GGCGGCATGG CGCGGGCGGT TTCGGCGATC AAAGCGAATG CCGAGCAGAA AGCGCGCGAC GAGGCCGAGG CCAAGAACAG GCTCGACCGG CTCGCCGCCG AGCAGCGCAA GGCGGACATG GCCCGTCTCG CCGACAGTTT CGAAGGGGCG GTCGGTGAGA TCATCGAGGT CGTGTCGTCG GCCGCGACCG AACTCGAGGC GTCCGCGCGC TCGCTGTCGT CGACCGCGGA GCGTTCGATC GATCTGGCGA CCGGCGTCGC GGCGGCGTCC GCGGAAGCCT CCTCAGGCGT GCAATCGGTC GCCTCCGCCA GCGAGGAACT GACCGCTTCG GTCGCCGAGA TCAGCCGTCA GGTGCAAAGC TCCGCCCGCG TCGCCAACGA GGCGGTGGAT CAGGCTCAGA AGACCAACAG CCGGGTCGGC GAGCTGTCGA GTGCGGCAGC GCGTATCGGC GACGTCGTCG AGCTGATCAA CACCATCGCA GGCCAGACCA ATCTGCTGGC GCTGAATGCG ACGATCGAGG CGGCACGCGC CGGCGAGGCC GGCCGCGGGT TCGCGGTCGT GGCTTCGGAA GTGAAGGCGC TGGCCGAACA GACCGCGAAG GCCACGGGCG AGATCGGCCA GCAGGTCGCC GGCATCCAGG CGGCGACCGA GGAATCGGTG GTGGCGATCA AGCAGATCGG CAACATCATC GGCCAGATGT CCGAGATTTC CTCCACGATC GCCTCGGCGG TGGAAGAGCA AGGCGCGGCG ACGAAGGAAA TCTCCGCCAA CATCCAGCAG GCGGCCCACG GCACGTCACT GGTCAGCTCG GATATCGCCA ACGTCAAAGG CGGCGCGCAG GAAACCGGCG CGGCCTCCGC GCAGGTGCTG TCGTCGGCGC AATCGCTGTC CAAAGAGAGC AACCGCCTCC GGGTCGAGGT CGGTAATTTC CTCTCCTCGG TGCGGGCCGC CTGA
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Protein sequence | MCASSHSALE PSSMKIRITI SAMIVLFGVI TAIGLAAMLA TSTFALKQLR VGGPLYSQIQ LGNDLVADIL PPPAYVIEAY LEATLALRKP SELAAHQARL AQLHKSYSER KDYWSSKSEL DPSVKKRLTV DSDAEVQKFW KVAEQDMIPA LSKGDKARAE AAYAELETIY QAHRSIIDDI VKKANNENSE LEKVAATQVD SYSMVTWVVS GLVVTLIVLG VLGIAIGLVR PVVRLTSALE EMAGGNLDVA IPGAGRGDEI GGMARAVSAI KANAEQKARD EAEAKNRLDR LAAEQRKADM ARLADSFEGA VGEIIEVVSS AATELEASAR SLSSTAERSI DLATGVAAAS AEASSGVQSV ASASEELTAS VAEISRQVQS SARVANEAVD QAQKTNSRVG ELSSAAARIG DVVELINTIA GQTNLLALNA TIEAARAGEA GRGFAVVASE VKALAEQTAK ATGEIGQQVA GIQAATEESV VAIKQIGNII GQMSEISSTI ASAVEEQGAA TKEISANIQQ AAHGTSLVSS DIANVKGGAQ ETGAASAQVL SSAQSLSKES NRLRVEVGNF LSSVRAA
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