Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7508 |
Symbol | |
ID | 5153445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 7883383 |
End bp | 7885041 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640562157 |
Product | putative methyl-accepting chemotaxis protein (with a HAMP region) |
Protein accession | YP_001243266 |
Protein GI | 148258681 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.692825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCC GGTTGAGGAT CCTCGCGGTC CTGAGCATCA TGCTCACATT GGCCTGCGGC CTCGCGCTCT ACGGCCTGCG TGGCATCACC TCGGCCGGCG ATCTCGTCGT CCGTCTTTAT GACGGGCCAC TGATGGCGAT CAATCACGCC CGCTCGGTCC ATGCCGAGCT CAATGCGGCC TTGCTGATCC TCAACCGGGC GGAGACCGTC GGAACCTCGA AATCGTCGGC CGACAGATTC GAGAAGCTCG TGAAGGCGAT GTCGGAGGAT CTCGACATCG TGCGCGAGCG GGTGAAGTCG AGCAGCGTCG ATTCGGCCCG CGAGCAGGCG ACCAAGAAGT TGCGTGACTG GTCGGATGCT GCACTCAAGC TGCTCAAGCC TGCCCCCGAG GGCGTCACAG AAATCCCGAC CACATTTCTG CTCAGCAAGC TCGGCAACGA AGCCCTGGCG ACAGTCGACG ACCTTGTCGA ACTGGTCGCT GCCTATGGCT ACGAATATCG CAACGAAGCC GAGTCCCATG TCGCCAGCTC GCGCATGATG ATGATGACCG CGACCGGCAT GACGCTGGTG CTCGGGCTTG TTCTCGCGCT CGGCTTTGCC TACTCGCTGA GCCGTCCGAT CATTTCGCTG GAGAAAGCGA TGATCCGGCT TGCCGATGGT GACTTCGACG TCATTCTCCC CGGGGTCAGG CGCAAGGACG AGATCGGCCA TGTCGCGCGC GCGGTCGAAC GTTTCAAGCT GCTGGCGGCC GAGCGCGCGC AGCGCGAGGT CGAGGCCAAG CTTGTGCAGG ATCAGGCCAT CGCAGAGCAG CGCAAGGCGG ACATGCACCG GCTCGCCGAT ACGTTCGAAG CGGCGATCGG CGAGATCGTC AGGACGGTGT CGGCGACGTC CGACGATGTC GAGTCCTCGG CGACCGCGCT GACCGGAACC GCCGACCGCG GACGCCAACT GGCGGAAGTC GTGGCGGGGG CTTCGGAAGA AGCGTCCACG AATGTGCAAT CGGTCGCGTC AGCAACCGAA GAGCTGTCCT CGTCCGTCAA TGAGATCAGC CGACAGGTGC AGGAATCGGC TCGCATGGCT GGAGAAGCTG TCGAGCAGGC CCGCAATACG ACTGATCGCG TGGGCGAACT GTCCAAAGCA GCCAACCGGA TCGGCGACGT TGTCGAGCTC ATCAACGCGA TCGCTGGCCA GACCAACCTG CTGGCGCTCA ATGCGACCAT CGAGGCCGCG CGAGCGGGCG AGGCCGGTCG CGGCTTTGCC GTGGTGGCGT CCGAGGTGAA GGCGCTGGCA GAGCAGACGG CGAAGGCCAC AGGTGAGATC GGCACGCAGA TCGCGGGCAT CCAGGCGGCC ACACAGGAAT CGGTGAGTGC GATCAGCCAG ATCAGCTCGA CGATCGAGCG CCTGTCCGAG GTGTCGTCGG CCATCGCTTC CGCGGTAGAG GAGCAGGGCG CTGCGACTCA GGAGATCTCC CGCAACATCC AGCACGCCGC ACACGGTACG CAGGAGGTCT CGACCAACAT CACCGATGTG AAGCGCGGAG CGAGCGATAC GGGGGATGCT TCTGCGACGC TGTTGTCGGC GGCGAGGTCG CTCGCCAATG ACAGCAAGCG GCTGCGCACC GAAGTCGACC GATTCCTGGC CACCGTGCGG GCCGCGTAG
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Protein sequence | MSIRLRILAV LSIMLTLACG LALYGLRGIT SAGDLVVRLY DGPLMAINHA RSVHAELNAA LLILNRAETV GTSKSSADRF EKLVKAMSED LDIVRERVKS SSVDSAREQA TKKLRDWSDA ALKLLKPAPE GVTEIPTTFL LSKLGNEALA TVDDLVELVA AYGYEYRNEA ESHVASSRMM MMTATGMTLV LGLVLALGFA YSLSRPIISL EKAMIRLADG DFDVILPGVR RKDEIGHVAR AVERFKLLAA ERAQREVEAK LVQDQAIAEQ RKADMHRLAD TFEAAIGEIV RTVSATSDDV ESSATALTGT ADRGRQLAEV VAGASEEAST NVQSVASATE ELSSSVNEIS RQVQESARMA GEAVEQARNT TDRVGELSKA ANRIGDVVEL INAIAGQTNL LALNATIEAA RAGEAGRGFA VVASEVKALA EQTAKATGEI GTQIAGIQAA TQESVSAISQ ISSTIERLSE VSSAIASAVE EQGAATQEIS RNIQHAAHGT QEVSTNITDV KRGASDTGDA SATLLSAARS LANDSKRLRT EVDRFLATVR AA
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