Gene BBta_7508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7508 
Symbol 
ID5153445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7883383 
End bp7885041 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content64% 
IMG OID640562157 
Productputative methyl-accepting chemotaxis protein (with a HAMP region) 
Protein accessionYP_001243266 
Protein GI148258681 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.692825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCC GGTTGAGGAT CCTCGCGGTC CTGAGCATCA TGCTCACATT GGCCTGCGGC 
CTCGCGCTCT ACGGCCTGCG TGGCATCACC TCGGCCGGCG ATCTCGTCGT CCGTCTTTAT
GACGGGCCAC TGATGGCGAT CAATCACGCC CGCTCGGTCC ATGCCGAGCT CAATGCGGCC
TTGCTGATCC TCAACCGGGC GGAGACCGTC GGAACCTCGA AATCGTCGGC CGACAGATTC
GAGAAGCTCG TGAAGGCGAT GTCGGAGGAT CTCGACATCG TGCGCGAGCG GGTGAAGTCG
AGCAGCGTCG ATTCGGCCCG CGAGCAGGCG ACCAAGAAGT TGCGTGACTG GTCGGATGCT
GCACTCAAGC TGCTCAAGCC TGCCCCCGAG GGCGTCACAG AAATCCCGAC CACATTTCTG
CTCAGCAAGC TCGGCAACGA AGCCCTGGCG ACAGTCGACG ACCTTGTCGA ACTGGTCGCT
GCCTATGGCT ACGAATATCG CAACGAAGCC GAGTCCCATG TCGCCAGCTC GCGCATGATG
ATGATGACCG CGACCGGCAT GACGCTGGTG CTCGGGCTTG TTCTCGCGCT CGGCTTTGCC
TACTCGCTGA GCCGTCCGAT CATTTCGCTG GAGAAAGCGA TGATCCGGCT TGCCGATGGT
GACTTCGACG TCATTCTCCC CGGGGTCAGG CGCAAGGACG AGATCGGCCA TGTCGCGCGC
GCGGTCGAAC GTTTCAAGCT GCTGGCGGCC GAGCGCGCGC AGCGCGAGGT CGAGGCCAAG
CTTGTGCAGG ATCAGGCCAT CGCAGAGCAG CGCAAGGCGG ACATGCACCG GCTCGCCGAT
ACGTTCGAAG CGGCGATCGG CGAGATCGTC AGGACGGTGT CGGCGACGTC CGACGATGTC
GAGTCCTCGG CGACCGCGCT GACCGGAACC GCCGACCGCG GACGCCAACT GGCGGAAGTC
GTGGCGGGGG CTTCGGAAGA AGCGTCCACG AATGTGCAAT CGGTCGCGTC AGCAACCGAA
GAGCTGTCCT CGTCCGTCAA TGAGATCAGC CGACAGGTGC AGGAATCGGC TCGCATGGCT
GGAGAAGCTG TCGAGCAGGC CCGCAATACG ACTGATCGCG TGGGCGAACT GTCCAAAGCA
GCCAACCGGA TCGGCGACGT TGTCGAGCTC ATCAACGCGA TCGCTGGCCA GACCAACCTG
CTGGCGCTCA ATGCGACCAT CGAGGCCGCG CGAGCGGGCG AGGCCGGTCG CGGCTTTGCC
GTGGTGGCGT CCGAGGTGAA GGCGCTGGCA GAGCAGACGG CGAAGGCCAC AGGTGAGATC
GGCACGCAGA TCGCGGGCAT CCAGGCGGCC ACACAGGAAT CGGTGAGTGC GATCAGCCAG
ATCAGCTCGA CGATCGAGCG CCTGTCCGAG GTGTCGTCGG CCATCGCTTC CGCGGTAGAG
GAGCAGGGCG CTGCGACTCA GGAGATCTCC CGCAACATCC AGCACGCCGC ACACGGTACG
CAGGAGGTCT CGACCAACAT CACCGATGTG AAGCGCGGAG CGAGCGATAC GGGGGATGCT
TCTGCGACGC TGTTGTCGGC GGCGAGGTCG CTCGCCAATG ACAGCAAGCG GCTGCGCACC
GAAGTCGACC GATTCCTGGC CACCGTGCGG GCCGCGTAG
 
Protein sequence
MSIRLRILAV LSIMLTLACG LALYGLRGIT SAGDLVVRLY DGPLMAINHA RSVHAELNAA 
LLILNRAETV GTSKSSADRF EKLVKAMSED LDIVRERVKS SSVDSAREQA TKKLRDWSDA
ALKLLKPAPE GVTEIPTTFL LSKLGNEALA TVDDLVELVA AYGYEYRNEA ESHVASSRMM
MMTATGMTLV LGLVLALGFA YSLSRPIISL EKAMIRLADG DFDVILPGVR RKDEIGHVAR
AVERFKLLAA ERAQREVEAK LVQDQAIAEQ RKADMHRLAD TFEAAIGEIV RTVSATSDDV
ESSATALTGT ADRGRQLAEV VAGASEEAST NVQSVASATE ELSSSVNEIS RQVQESARMA
GEAVEQARNT TDRVGELSKA ANRIGDVVEL INAIAGQTNL LALNATIEAA RAGEAGRGFA
VVASEVKALA EQTAKATGEI GTQIAGIQAA TQESVSAISQ ISSTIERLSE VSSAIASAVE
EQGAATQEIS RNIQHAAHGT QEVSTNITDV KRGASDTGDA SATLLSAARS LANDSKRLRT
EVDRFLATVR AA