| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1045 |
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| Symbol | |
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| ID | 4031651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1169121 |
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| End bp | 1170815 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637969543 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_576353 |
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| Protein GI | 92116624 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCAAAA ATTTTCCGGT TACCGATGAC GAATACCCCG TCTCCGACGA AACGCTGATC
GTTTCCAGGA CCGATCTCAA AGGCCGTCTC TCCTATGTCA ACGAAGACTT CATCGACGCA
GCGGAATTCA CATCCGAGGA GTTGATCGGC AAGGCGCACA ACATCGTCCG CCACCCGGAC
ATGCCGGCGG AAGCGTTCGA GGATCTCTGG GACACCCTGA AGGCCGAGAA GCCCTGGGTC
GGAGCGATCA AGAACCGCCG CAAGAACGGC GGCTTCTACT GGGTGCTGGC GAGCGCCTCG
CCGCTCCGGC AGAACGGGCA GGTCACCGGC TATACCTCGA TCCGCACCAA GCTTGCCGCC
GACCAGCGCG CGCTGGCGGA AGACGTTTAT GCAGCCATTC GCGAAAAGCG GCCGCATCAA
TACCGGATCG ATGCCGGCAT CATCCGGAAA CGGTCGTTCT TCGATCGTTT CGGGCTGTTC
ACCCGCACCA TACGGGCGCG AATGACGACG CTGATCGCGC TGCAGGCTGC TTTTCTGCTC
ACCTGTGGTG TGCTGGGGGC AACCGTGGCT GGCGGGACGT GGGGCCTCGT CCTCGGCCTT
CTTGCCATTG CCGGGGTCGC CGTCGGGGGG ATCGTGGGAC GCCAGACGCT TCGTGCGTTT
GAGGGGCCGA TGCAGCACCT GAACGAGACG ATGCTGAACC TCGTCTACGA CAAGTTCGAC
AATCGCATCG AGATCAAGCG CGACGACGAG ATCGGCGAAG CACTCCGCAA CCTTCAGACC
GTTCAGACGC TGATTCGCTT CAGCCGGGAA GAGGTCAATT CCACGCAACG CCGGGCCGAG
GCCCAGCGCA AGACGGACAT GACGAGAATC GCCGATTCCT TCGAAGCGGC GATCGGCGAG
ATCGTTGGGG CTGTCGCGAC CTCAGCGACC GAACTGGAGG CTTCCGCAAC CACGCTCGCG
TCGAATGCCG ACCATGCAAA GGATTTTGCT GCACGCGTCG CCAACGGCTC GACCGAAGCC
TCCTCGAACG TCAATTCGGT GGCCTCGGCT ACGGAGCAGA TGACCGCCTC GGTTCGCGAA
ATCAGCCAGC GGGTGCAGGA ATCGGCGCGC ATGGCGGGCG ATGCCGTCGA TCAGGTGCAT
TCGGCGACGG AGCGCGTCAG CGCGCTGTCG AGCGCGGCGT CGCGCATCGG CGACATCGTC
GAGATGATCA ACAATATCGC GGGTCAGACC AACCTCCTCG CCCTGAACGC CACCATCGAG
GCGGCGCGCG CCGGGGAAGC CGGCCGGGGG TTTTCGGTCG TTGCCTCCGA AGTGAAGGCG
CTCGCCGAGC AAACCGGCAA GGCGACCGGC GAAATCGGCC AGCAGATCAG CGGCATCCAG
TCTGCCACGC AGGAATCCGT CGCCGCGATC AACGAGATCC GCAATTCCAT CGAAAAACTC
TCGGGAATCT CCTCCACGAT CGCGTCCGCC ATCGAGGAAC AGGGCGCGAC CACCCAGGAA
GTCTCCCGCA ATGTGCAGCA CGCCGCCCAG GGGGCGCAGG AAGTCTCCTC GAATGTCGGC
AATCTCCAGC GCGGAGCGGC GGAAACCGGA ACTGCATCGT CCCAGGTATT GTCCGCTGCG
CAAACGCTGT CGCGCGACAG CGCCCGGCTC AAGGCAGAGG TCAACAACTT CCTGAACTCC
GTTCGGGTTG CATAA
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| Protein sequence | MRKNFPVTDD EYPVSDETLI VSRTDLKGRL SYVNEDFIDA AEFTSEELIG KAHNIVRHPD
MPAEAFEDLW DTLKAEKPWV GAIKNRRKNG GFYWVLASAS PLRQNGQVTG YTSIRTKLAA
DQRALAEDVY AAIREKRPHQ YRIDAGIIRK RSFFDRFGLF TRTIRARMTT LIALQAAFLL
TCGVLGATVA GGTWGLVLGL LAIAGVAVGG IVGRQTLRAF EGPMQHLNET MLNLVYDKFD
NRIEIKRDDE IGEALRNLQT VQTLIRFSRE EVNSTQRRAE AQRKTDMTRI ADSFEAAIGE
IVGAVATSAT ELEASATTLA SNADHAKDFA ARVANGSTEA SSNVNSVASA TEQMTASVRE
ISQRVQESAR MAGDAVDQVH SATERVSALS SAASRIGDIV EMINNIAGQT NLLALNATIE
AARAGEAGRG FSVVASEVKA LAEQTGKATG EIGQQISGIQ SATQESVAAI NEIRNSIEKL
SGISSTIASA IEEQGATTQE VSRNVQHAAQ GAQEVSSNVG NLQRGAAETG TASSQVLSAA
QTLSRDSARL KAEVNNFLNS VRVA
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