Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0337 |
Symbol | |
ID | 4020797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 390010 |
End bp | 391701 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637960516 |
Product | chemotaxis sensory transducer |
Protein accession | YP_567476 |
Protein GI | 91974817 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.760858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.789667 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGCAA AGCTCTCCAT TCGCGCCAAG GTCACGGCGC TTGTCGCGGC CCTTCTGATC GCCATGACCG GCCTCGGCGG GCTCGGGATT CTCAAGGTGC GGTCGATGAA CTTTGCGGCG CTCGACCTCG CCACCAACTG GCTGCCGAGC ATCAAGGTTC TCGGCGAATT GAGGTTCAAC GTCCTCAACT ACCGGACCAT GATCCGCAAT CACATGCTCG ACGTCACCCC CGAAGGCAAA GCACGCTTCG AACAGCGTCT GGCGTCGATC GACGCGACCA TCAAGAAGGA CCAAGAGACC TATGCGGCGA TGATTGCCTC GCCGGAAGAA CGGCAGCTCT ACGACAGCTG GGTCGTGCAG TGGAACGACT ACAAGTCCGT GACCACGAAA ATGCTCGAGA TGTCACGCAA GGACATCGGA AAGGTCTCGG CGGAGTCGAC CGACTTCCTG TTCAAGAACC TGAATCCGAT CGGCGTCCGC ATGGACGAGA TCCTGCAGAA GGATATCGAC ATGAACGACA AGGGCGCGGA CGGTGCGACC GCCTTGGCGG CCTCGACCTA CTCCTCCGCC ATCTACCTGG TCCTGACCAT TCTGGGCGTT GCGATGGTCG TCGGCATCGT TGCGAGCGTG ATGGTGATCC GCGACGTGGC GCAGGGCATT GCGTCGATCG TCAAGCCGAT GCAGTCGCTC GGTCAGGGCG ACCTCTCGGC GGACGTGCCG CATCGCGGCG AGAAGACCGA AGTCGGCTCG ATGGCGGATG CGCTGCAGAT CTTCAAGGAC GCGCTGATCG CCAAGAAGGC CGCTGACGAG GACGCGGCGC GTGAAGCTGA GGCGAAGATC GCGCGCGGCC AACGCATCGA TGCAGCGACC CGCCAGTTCG AAACCTCGAT CGGCGAAATC GTCGAGACGG TGTCTTCGGC GTCGACCGAA CTGGAGGCGT CGGCCGGCAC GCTGACCGCC ACGGCGGGAC ACGCCCAGGA ACTGACCACC GCGGTCGCGG CGGCCTCGGA AGAAGCCTCG ACCAATGTGC AGTCGGTGGC CTCGGCGACC GAAGAGATGT CGTCCTCGAT CACCGAGATC AGCCGTCAGG TTCAGGAATC GGCGCGGATC GCCACCGAGG CGGTCGACCA GGCGCGCAAG ACCAACGACA GCGTCGGGAT GCTGTCAGCC GCCGCGGCGC GGATCGGCGA CGTCGTCGAA CTGATCAACA CCATCGCCGG CCAGACCAAT CTGCTGGCGC TGAACGCCAC GATCGAGGCG GCTCGCGCCG GCGAAGCGGG GCGCGGCTTC GCGGTGGTGG CGAGCGAGGT CAAGGCGCTC GCCGAGCAGA CCGCCAAGGC GACCGGCGAG ATCGGCCAGC AGATCACCGG CATTCAGGCG GCGACCGATC AGTCGGTCTC GGCGATCAAG GAGATCGGCC AGACCATCGG CCGGATGTCG GAAATCGCCT CGACCATCGC CTCGGCGGTG GAAGAGCAGG GCGCGGCGAC GCAGGAGATT TCGCGCAACG TGCAGCAGGC CGCGCAGGGC ACGCAGCAGG TTTCCGCCAA CATCACCGAC GTCCAGCGCG GCGCGACCGA AACCGGCTCG GCGTCGACGC AGGTTCTGTC CGCCGCGAAA TCGCTGTCAC AGGACAGCAA CCGGCTGAAG GAAGAGGTCG CTAGGTTCCT CGAAACCGTT CGCGCCGCCT GA
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Protein sequence | MFAKLSIRAK VTALVAALLI AMTGLGGLGI LKVRSMNFAA LDLATNWLPS IKVLGELRFN VLNYRTMIRN HMLDVTPEGK ARFEQRLASI DATIKKDQET YAAMIASPEE RQLYDSWVVQ WNDYKSVTTK MLEMSRKDIG KVSAESTDFL FKNLNPIGVR MDEILQKDID MNDKGADGAT ALAASTYSSA IYLVLTILGV AMVVGIVASV MVIRDVAQGI ASIVKPMQSL GQGDLSADVP HRGEKTEVGS MADALQIFKD ALIAKKAADE DAAREAEAKI ARGQRIDAAT RQFETSIGEI VETVSSASTE LEASAGTLTA TAGHAQELTT AVAAASEEAS TNVQSVASAT EEMSSSITEI SRQVQESARI ATEAVDQARK TNDSVGMLSA AAARIGDVVE LINTIAGQTN LLALNATIEA ARAGEAGRGF AVVASEVKAL AEQTAKATGE IGQQITGIQA ATDQSVSAIK EIGQTIGRMS EIASTIASAV EEQGAATQEI SRNVQQAAQG TQQVSANITD VQRGATETGS ASTQVLSAAK SLSQDSNRLK EEVARFLETV RAA
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