| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4147 |
|---|
| Symbol | |
|---|
| ID | 3973982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 4607084 |
|---|
| End bp | 4609168 |
|---|
| Gene Length | 2085 bp |
|---|
| Protein Length | 694 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637927250 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_533991 |
|---|
| Protein GI | 90425621 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG GCACTTTGCT CACCCTCGCC GTCGCTTCGC TCTCGGCCGT CGGCGGCGGA
CTCGCGGTCT ATCTGGCTGC GACCAAATAC CAGACCATGG AGCAGGTCTC CAACGCGCAA
GCGCGGCTGT CGCTGGTGCG CGCGGTCGGC GACATTCCGC GCTACCTCAA TTCCGAACGC
GGTTTCTCCA CCAACATCCT GTTCGGACCG GCCGTGGTCG ACCCCAAGCT GCGCGCCGAA
CTGGACGCCA AGTATCGCAA GCCGACCGAC GGCGCGCTCG ACAAGATGAA CCAGATCAGG
ACCAACTCCG TCGCGGCGTT CGACGACGGC GCCAACATCG CAAGCCAGAT CGAGGCGCTG
AACGGCCGCT TCAAGGCGCT GCGCGGCGCG ATCGACGCGG CGATCGACGG CCCGGCGGAG
CCCCGCCGCG ACGCCGCCAA GAAGATCATC GCCGACAATT CGGCGTTCAA CGCCGCGGTC
ACCACGCTGC TCGCCGAGCA GGTCCGCAAG ATCGCTTCGC GCAGCGGCGC GGCCTACCGG
CAGGCCACCT ACGCCAACGT CGCCTGGTCG CTGCGCGACG TCGGCGGCCT GAATTCCAGC
CTGCACAAGA ACATCGTCGG CGCCAAGCGC GTCGCCACCG AGGCCGAACG GCTGGAGCTC
GCCCGCTCGC AGGGCGCGTC CGATCAGATC GAGGCCTCGC TGCTGGCGCT GCGCGGCAAT
CCGGCGACGC CCGCCAATGT CGCCGCCGCG CTGGACAAGA TGAAGGAGAT CTTCGTCGAT
CGCTTCGGCA AGGAATTGAA GATGGTTCGG ACCGGCGCGG TGAGCGGCCA GTTCGAACAC
GACGTCGAGA CCTATTACGG CGAGACCCAG ATCGCGCTCG CCTCGGTGAT CGGCGTGCGC
GACGCCTTCT ATGACAATGC CGAGGAGATC CTGGCCGACG CCTATGGCGA CGCGCGGCTC
AGTTTCCTGA TCGCGGTCGT GGTGCTGCTG GCGGTTGCCG GCGCCGGCGC CGGCCTCGTG
GTGATGGTGC GACGCCGGAT CTGCCAGCCG ATCGTCGATA TCACCGCCTC GATGTCGCGG
CTGGCCGGCG GCGACGCCAC CGGCGCTATT CCCGCCAGCG ACCGCCACGA CGAGATCGGC
GCGATGGCCG CCGCCGTCCA GGTGTTCAAG GACAACATGA TCCGCGGCGA AGAGCTGGCC
GCCGCCCAGG CCGCGGAGAA CGACGCCAAG ATGCGGCGCG CGCGGATGAT CGACGATCTC
ACCAAATCCT TCGAGACAAG GATCGGCGAG CTGGTCGAGG GCCTGTCGTC GTCCTCCGCG
ACCATGGAGT CGACCGCCCG CGCGATGTCG TCGACCGCCG CCACCACCAA CCGCCAGGCC
GGCCTGGTCG CCGGCGCCTC CGAGCAAACC TCCTCCAACG TGCAGATGGT GGCCAGCGCC
ACCGAGGAAT TGACCTCGTC GATCAGCGAG ATCAGCCGCC AGGTGGCGCA ATCGGCGCAA
ATCTCCGCCC GCGCCGTCGC CGACGCCAAG CGCACCGGCG ACACCGCGCA ATCGCTCGCC
GCGGGCGCGC AGAAGATCGG CGACGTGGTG ACGCTGATCC AGAACATCGC CTCGCAGACC
AACCTGTTGG CGCTGAACGC CACCATCGAG GCGGCGCGCG CCGGCGAAGC CGGGCGCGGC
TTTGCCGTGG TCGCCTCGGA GGTGAAATCG CTGGCCGGCC AGACCGCGCA GGCCACCACC
GAAATCTCCG AACAGGTCGC CGCGATCCAG AACGCCAGCG ACCAGACCGT GACGGCGATC
CGCAACGTGC TCGAGGTGAT CACCGAGATC GAGCAGATCG GCGGCGCCAT TGGGGCTGCG
ATCGAACAGC AAGGCTCGGC CACCAAGGAG ATCGCCCGCA ACGTCCAGGA AGCCGCGCAC
GGCACCCAGG AGGTCAACGC CAATATCTCC GGCGTGCAGC AGGCCGCCAA CGACACCGGG
GCCGCGGCGA CGCAAGTGCT GGGCGCCGCC GAAGAGGTGT CGCAGCAGTC GAAAGATCTC
GCCAGCCAGG TCAACCGCTT CCTCGCCGAC GTCCGCGCGG CGTGA
|
|---|
| Protein sequence | MKIGTLLTLA VASLSAVGGG LAVYLAATKY QTMEQVSNAQ ARLSLVRAVG DIPRYLNSER
GFSTNILFGP AVVDPKLRAE LDAKYRKPTD GALDKMNQIR TNSVAAFDDG ANIASQIEAL
NGRFKALRGA IDAAIDGPAE PRRDAAKKII ADNSAFNAAV TTLLAEQVRK IASRSGAAYR
QATYANVAWS LRDVGGLNSS LHKNIVGAKR VATEAERLEL ARSQGASDQI EASLLALRGN
PATPANVAAA LDKMKEIFVD RFGKELKMVR TGAVSGQFEH DVETYYGETQ IALASVIGVR
DAFYDNAEEI LADAYGDARL SFLIAVVVLL AVAGAGAGLV VMVRRRICQP IVDITASMSR
LAGGDATGAI PASDRHDEIG AMAAAVQVFK DNMIRGEELA AAQAAENDAK MRRARMIDDL
TKSFETRIGE LVEGLSSSSA TMESTARAMS STAATTNRQA GLVAGASEQT SSNVQMVASA
TEELTSSISE ISRQVAQSAQ ISARAVADAK RTGDTAQSLA AGAQKIGDVV TLIQNIASQT
NLLALNATIE AARAGEAGRG FAVVASEVKS LAGQTAQATT EISEQVAAIQ NASDQTVTAI
RNVLEVITEI EQIGGAIGAA IEQQGSATKE IARNVQEAAH GTQEVNANIS GVQQAANDTG
AAATQVLGAA EEVSQQSKDL ASQVNRFLAD VRAA
|
|---|
| |