Gene BBta_2368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2368 
Symbol 
ID5149675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2459902 
End bp2461587 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content67% 
IMG OID640557289 
Productputative methyl-accepting chemotaxis receptor/sensory transducer precursor 
Protein accessionYP_001238445 
Protein GI148253860 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.280114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCAAGC TTTCCATTCG CCTCAAGATC ATTGCCGTCA TCGTACTCCT CCTCGTGGTG 
ATGTCCGGCA TGGGCGTGCT GGCGCTGCGC AGCATGCAGG GCATCAACGC ACGAACGGTC
GACATCTCCA CCAACTGGCT GCCGAGCGTG CGGGTGCTCG GCAACCTGCG CGCCGACATC
AACGTCTACC GGCTCACGCT GCGCGCCCAC GTGATGGCGC TGACCCCGGA GGCGAAAGCC
AACAACGACA AGCGCATGGC CGATGTGTTC GACAAGGTGA AGAAGGACAT CAAGGCCTAT
CAGCCGCTGA TCTCGACGGC CGAGGAGCGC AGCATCTACG AATCCTGGAC GCGCGCTTGG
GACAAATACG CCGCCGAGGC CGAGAAAGTG CTCGAGGTCT CGCGCAAGAG CATCGGCAAG
CTGCCCGACG ACGTCGATGC GCTGTTCAAG CCCGCCGGCG CGGCGGCGGC CGCGCAGGAG
GAGATTCTCA CCAAGGCGAT CGACTATAAC GACAAGGGCG CGGAGACGGC CACGCGCGAC
GCGGCCGACA GCTACAATGT CACCTTCTGG GTCGTGACCT CCATCATTCT CGGGGCCCTC
GCAGCCGGCG TCGGCGTCGG TTTCTATCTC GTGCACGACG TCTCCTCCGG CATCGCCTCG
ATCATCAAGC CGATGCAGGC GCTCGGCGAG GGCGATCTCG CGGCCGAGGT GCCGCACCGC
GGTGAGCCGA CCGAAATGGG CGCGATGGCC GACACCCTGC AGGTGTTCAA GGAGGCGCTG
ATCGCGAAGC GAGAGGCCGA TGCGCTCGCC GCGCGCGACG CCGAGGCCAA GATCGAGCGC
GGCCGTCGCG TCGACAACCT CACCCGCCAG TTCGAGAATA CGATCGGTGA GATCGTGCAG
ACAGTGTCCT CGGCGTCCAC CGAGCTCGAG CATTCCGCCG GCGCGCTGTC GTCGACGGCG
ACACGCTCGC AGCAGATCTC GACCCAGGTC GCAGCCGCCT CGGAGGAAGC CTCGACCAAT
GTGCAATCGG TCGCCTCGGC CACCGAGGAG CTGTCATCAT CGATCACCGA GATCAGCCGC
CAGGTGCAGG AATCGGCGCG CATGGCGCAG GAGGCCGTCT CGCAGGCACG CCAGACCAAC
GATCGCGTCG GCGAATTGTC GAAGGCCGCG GCCCGCATCG GCGATGTCGT GGAGCTGATC
AACTCTATCG CCGGGCAGAC CAACCTGCTG GCGCTGAACG CCACGATCGA GGCGGCACGC
GCCGGCGAGG CCGGCCGCGG CTTCGCGGTG GTCGCCTCCG AAGTGAAGGC GCTGGCCGAG
CAGACCGCGA AGGCGACCGA CGAGATCGGC CAGCAGATCG GCAGCATCCA GGCTGCGACT
CAGGAATCTG TCGGCGCCAT CCGCGACATC TCGGGCACCA TCGAGCGGCT GTCGGAAATC
TCCTCGGCGA TCGCCGCTGC CGTGGAAGAG CAGGGCGCGG CGACCCAGGA GATCGCGCGC
AACGTCCAGC AGGCCTCGCA CGGCACGCAG CAGGTGTCGT CCAACGTGGT CGACGTGCAG
CGGGGCGCGG CGGAGACCGG CCAGGCGTCG ACGCATGTGC TCGATGCCGC GAAGTCGCTG
GCCTCCGACA GCGATCGTCT GAAGCGTGAG GTGGCGAGCT TCCTCCAGTC GGTGCGCGCA
GCGTGA
 
Protein sequence
MSKLSIRLKI IAVIVLLLVV MSGMGVLALR SMQGINARTV DISTNWLPSV RVLGNLRADI 
NVYRLTLRAH VMALTPEAKA NNDKRMADVF DKVKKDIKAY QPLISTAEER SIYESWTRAW
DKYAAEAEKV LEVSRKSIGK LPDDVDALFK PAGAAAAAQE EILTKAIDYN DKGAETATRD
AADSYNVTFW VVTSIILGAL AAGVGVGFYL VHDVSSGIAS IIKPMQALGE GDLAAEVPHR
GEPTEMGAMA DTLQVFKEAL IAKREADALA ARDAEAKIER GRRVDNLTRQ FENTIGEIVQ
TVSSASTELE HSAGALSSTA TRSQQISTQV AAASEEASTN VQSVASATEE LSSSITEISR
QVQESARMAQ EAVSQARQTN DRVGELSKAA ARIGDVVELI NSIAGQTNLL ALNATIEAAR
AGEAGRGFAV VASEVKALAE QTAKATDEIG QQIGSIQAAT QESVGAIRDI SGTIERLSEI
SSAIAAAVEE QGAATQEIAR NVQQASHGTQ QVSSNVVDVQ RGAAETGQAS THVLDAAKSL
ASDSDRLKRE VASFLQSVRA A