| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2653 |
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| Symbol | |
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| ID | 3910446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3032049 |
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| End bp | 3034124 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637884553 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_486266 |
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| Protein GI | 86749770 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00184965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0777916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG GCCGCCTCTT TGCAATTTCG ATGCTTTCGG TGACGGCTCT GGCCATCCTC
CCTGCTGCAC AGGTCGTGAT TGAGCAGGTC AGGGCTGTCA ACGACAAGGC CGATGCGATC
AAGACAGTGG AGGCATTCGG CGCCGTGCTG CTGTTCGCGC AGGAGGTCGT GAGCCACCGC
GCCCCCTACA TCGGGCCGCT GTTCCAGGAG CCGGTCGCGA CACCCGCGCA GCTCGAGGCG
GTGCGCAAGA TCAAGCAGTC GTCCGAAGCC GCCTTCGCCA AGGCGCGCGC GCAGGTCGCG
AACGTCTCCG AGACCGAAGC CATCCGCCGC AGCCTGGAGC AGGCCGCAGC CAAGCTGGCT
GACCTTCAAA CGTTGGTGGA ACCCAGCCTT TCCGCGCCGC TGAGCGGACG TGATCAAGCC
GCGATCAAGA GTTTCCTGCC CGGTATCGCG CAGACCGCCG TGGCGATCGA GCCGATCCTG
AATCGGCTTC AGAACCATGT TGCCAATGCG GATGCATCGC TGACGACCCT GCTCGACGTA
GCCCGCACCG CGCAGGATCT GCGCGTGACG GCGGGCGGAC GTGCGGCGTC GCTGTCGCCT
GCGCTCAACA CCCGGCGCGC GTTGACCGCG GCAGAGAAGG CAGCGATGGA CCGTGCCCAG
GGCCGTACCG AGATTGATCG TGACCGTCTG GAGGCCAGCA TCGACCAGAT CGGCAATCCG
GAGCGTCTGT TGGCCGCATT CAACGACGCC AGGGACACCT ACTTTGCGCG CGCGCTTCCG
ATCGTCGACA AGGAGATCGC GGCCGGATTG AGCGACCTCA ACTATGCGCT CACGGCGGAT
AAGCTGGCCG ACACGGTGGT GCCTGCGGTG CAGAAATTCT ACTTAGTACG AGATTCGGCC
ATCGCCGAGG CGCGCAACCG TGCGATCGCC GCGCGTGACC AAGCCTATCT GATGCTATCG
CTGGCGACGG TCGTCGTCGT GGCCTTGTTC GGCATTCTCG TGTTCGTCAC CATGCTGCTG
CGCCGCCGCG TCATCAACCC GATCGTGCAC CTGACCGGCC TGATCGGCCA GATGGCGGCC
GGCAATGACG ACGTGGCGAT CCCGACCTGC GACCGCGACG ACGAGATCGC CGCGATGACC
GGCTCGCTGC AGACCTTCAA GGAAGCGCTG TTGGAGAAGA AGCGTGCAGA GCAGGCGGCT
GCGGCGGACG CGCAGTCTAA GATCGAGCGG GGCCAGCGGG TGGAGAGGTT CACGCGCGAT
TTTGAGATGG TGATTGGCGA GGTCGTTGGC GTCGTTTCAT CCGCGTCGGG CGATCTCGAG
CGCTCCGCCG CATCCCTGAC GACGACGGCG GCCCGCTCGC TGGAGCTCGC CACCGTGGTG
ACATCGGCGT CCGAGGAAGC TTCGACCAAC GTGCATTCGG TCGCCGCGGC GGCAGAGGAG
ATGAGCTCGT CGGTCAACGA GATAAGCCGT CAGGTGCAGG ACTCCGCGCG CATCGCCAGC
GAGGCGCTGG CGCAGGCCCG CAAGACCAAC GACAATGTCG CCGAGCTCGC AAAGGCGGCG
GCGCGGATCG GCGACGTCGT CGAGCTGATC AATGCGATCG CGGGGCAAAC CAATCTGCTC
GCGCTTAACG CCACCATCGA GGCCGCCCGC GCCGGCGAGG CCGGCCGCGG CTTCGCGGTG
GTCGCCTCGG AGGTCAAGGC GCTGGCCGAG CAGACCGCTA AGGCGACCGG AGAGATTGGC
CAGCAGATCG GCGGCATCCA GGCTGCGACC AATGAATCGG TTGGTTCGAT CAAGGACATC
GGCGAGACCA TCGCCCGGAT GTCGGAGATC GCCTCCGCCA TCGCCTCTGC CGTCGAGGAG
CAGAGCTCGG CCACGCGCGA AATCTCGAGC AACGTCCAGC AGGCCGCCCA CGGCACCCAA
CAGGTCTCGG CGAACATTGC CAGTGTCCGG CAGGGCGCCG ACGAGACCGG CTCGGCCTCC
TCACAGGTAC TGGCGGCCGC GAAGGCCCTG TCCGGCCAGA GCAGCCGCCT CCGCGACGAG
GTCAGCCGCT TCCTGAATTC CGTTCGCGCG GCGTGA
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| Protein sequence | MKIGRLFAIS MLSVTALAIL PAAQVVIEQV RAVNDKADAI KTVEAFGAVL LFAQEVVSHR
APYIGPLFQE PVATPAQLEA VRKIKQSSEA AFAKARAQVA NVSETEAIRR SLEQAAAKLA
DLQTLVEPSL SAPLSGRDQA AIKSFLPGIA QTAVAIEPIL NRLQNHVANA DASLTTLLDV
ARTAQDLRVT AGGRAASLSP ALNTRRALTA AEKAAMDRAQ GRTEIDRDRL EASIDQIGNP
ERLLAAFNDA RDTYFARALP IVDKEIAAGL SDLNYALTAD KLADTVVPAV QKFYLVRDSA
IAEARNRAIA ARDQAYLMLS LATVVVVALF GILVFVTMLL RRRVINPIVH LTGLIGQMAA
GNDDVAIPTC DRDDEIAAMT GSLQTFKEAL LEKKRAEQAA AADAQSKIER GQRVERFTRD
FEMVIGEVVG VVSSASGDLE RSAASLTTTA ARSLELATVV TSASEEASTN VHSVAAAAEE
MSSSVNEISR QVQDSARIAS EALAQARKTN DNVAELAKAA ARIGDVVELI NAIAGQTNLL
ALNATIEAAR AGEAGRGFAV VASEVKALAE QTAKATGEIG QQIGGIQAAT NESVGSIKDI
GETIARMSEI ASAIASAVEE QSSATREISS NVQQAAHGTQ QVSANIASVR QGADETGSAS
SQVLAAAKAL SGQSSRLRDE VSRFLNSVRA A
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