More than 300 homologs were found in PanDaTox collection
for query gene Rru_A1293 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  100 
 
 
562 aa  1106    Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_007643  Rru_A3563  chemotaxis sensory transducer  50.35 
 
 
563 aa  482  1e-135  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  50.4 
 
 
563 aa  394  1e-108  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  41.84 
 
 
562 aa  394  1e-108  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007643  Rru_A2076  chemotaxis sensory transducer  42.48 
 
 
561 aa  376  1e-103  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.723039  n/a   
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  41.61 
 
 
562 aa  372  1e-101  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  42.59 
 
 
563 aa  370  1e-101  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  42.32 
 
 
561 aa  369  1e-100  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  42.14 
 
 
561 aa  366  1e-100  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
563 aa  361  2e-98  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  42.23 
 
 
563 aa  354  2e-96  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_007643  Rru_A2078  chemotaxis sensory transducer  41.77 
 
 
561 aa  352  8e-96  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.960991  n/a   
 
 
-
 
NC_007778  RPB_0489  methyl-accepting chemotaxis sensory transducer  40.67 
 
 
564 aa  350  4e-95  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.301128  normal 
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  40.54 
 
 
563 aa  350  4e-95  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  40.84 
 
 
561 aa  347  4e-94  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_010725  Mpop_4549  methyl-accepting chemotaxis sensory transducer  44.21 
 
 
561 aa  347  4e-94  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  41.74 
 
 
563 aa  347  4e-94  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0336  chemotaxis sensory transducer  42.09 
 
 
563 aa  346  5e-94  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  42.4 
 
 
561 aa  346  6e-94  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  41.09 
 
 
563 aa  346  8e-94  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  40.67 
 
 
563 aa  339  7e-92  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  42.71 
 
 
560 aa  335  1e-90  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_010172  Mext_2072  chemotaxis sensory transducer  42.42 
 
 
556 aa  334  3e-90  Methylobacterium extorquens PA1  Bacteria  normal  0.68132  normal  0.341201 
 
 
-
 
NC_011757  Mchl_2346  methyl-accepting chemotaxis sensory transducer  42.42 
 
 
556 aa  333  5e-90  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.395485 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  41.2 
 
 
563 aa  332  9e-90  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2972  methyl-accepting chemotaxis sensory transducer  43.31 
 
 
563 aa  332  1e-89  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2902  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
563 aa  330  3e-89  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.32606  normal  0.0943242 
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  38.94 
 
 
563 aa  330  3e-89  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  40.53 
 
 
562 aa  329  9e-89  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_010172  Mext_4068  chemotaxis sensory transducer  43.14 
 
 
591 aa  326  6e-88  Methylobacterium extorquens PA1  Bacteria  normal  0.269414  normal 
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  39.79 
 
 
561 aa  325  1e-87  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  39.26 
 
 
563 aa  325  1e-87  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  41.71 
 
 
561 aa  324  2e-87  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4435  methyl-accepting chemotaxis sensory transducer  43.14 
 
 
561 aa  325  2e-87  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0198477  normal 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  50.78 
 
 
688 aa  316  7e-85  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_010511  M446_2544  methyl-accepting chemotaxis sensory transducer  41.65 
 
 
566 aa  315  9.999999999999999e-85  Methylobacterium sp. 4-46  Bacteria  normal  0.476321  normal 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  49.15 
 
 
694 aa  315  1.9999999999999998e-84  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  49.35 
 
 
688 aa  313  6.999999999999999e-84  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  51.03 
 
 
563 aa  310  2.9999999999999997e-83  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_2047  methyl-accepting chemotaxis sensory transducer  40.71 
 
 
562 aa  310  2.9999999999999997e-83  Methylobacterium populi BJ001  Bacteria  normal  normal  0.759486 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  49.09 
 
 
689 aa  309  1.0000000000000001e-82  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  46.15 
 
 
572 aa  306  5.0000000000000004e-82  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  37.89 
 
 
566 aa  306  6e-82  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  46.3 
 
 
688 aa  306  6e-82  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_007643  Rru_A1408  chemotaxis sensory transducer  52.17 
 
 
568 aa  304  3.0000000000000004e-81  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.591131  n/a   
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  40.33 
 
 
563 aa  304  3.0000000000000004e-81  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2778  methyl-accepting chemotaxis sensory transducer  41.61 
 
 
558 aa  303  8.000000000000001e-81  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.060825  normal 
 
 
-
 
NC_010511  M446_0370  methyl-accepting chemotaxis sensory transducer  38.07 
 
 
560 aa  303  8.000000000000001e-81  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.52335 
 
 
-
 
NC_010172  Mext_2555  chemotaxis sensory transducer  41.46 
 
 
561 aa  302  1e-80  Methylobacterium extorquens PA1  Bacteria  normal  0.834906  normal 
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  52.54 
 
 
561 aa  302  1e-80  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_010725  Mpop_2032  methyl-accepting chemotaxis sensory transducer  41.61 
 
 
558 aa  302  1e-80  Methylobacterium populi BJ001  Bacteria  normal  normal  0.176129 
 
 
-
 
NC_010505  Mrad2831_4059  methyl-accepting chemotaxis sensory transducer  41.65 
 
 
563 aa  301  3e-80  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.193865  normal 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  44.28 
 
 
542 aa  300  4e-80  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_010511  M446_0619  methyl-accepting chemotaxis sensory transducer  53.16 
 
 
561 aa  300  4e-80  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0130228 
 
 
-
 
NC_011894  Mnod_5243  methyl-accepting chemotaxis sensory transducer  39.79 
 
 
562 aa  300  4e-80  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  48.84 
 
 
566 aa  300  5e-80  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  48.77 
 
 
573 aa  300  6e-80  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  38.77 
 
 
566 aa  299  7e-80  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  50.27 
 
 
562 aa  299  8e-80  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  48.66 
 
 
691 aa  298  1e-79  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  49.35 
 
 
688 aa  298  1e-79  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0252  methyl-accepting chemotaxis sensory transducer  42.15 
 
 
562 aa  298  2e-79  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  38.87 
 
 
562 aa  298  2e-79  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  47.59 
 
 
691 aa  297  3e-79  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  39.24 
 
 
566 aa  297  4e-79  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  50.55 
 
 
562 aa  296  5e-79  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  48.06 
 
 
561 aa  296  7e-79  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  48.94 
 
 
656 aa  296  9e-79  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  43.94 
 
 
691 aa  295  1e-78  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  48.79 
 
 
567 aa  295  1e-78  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_010511  M446_2091  methyl-accepting chemotaxis sensory transducer  38.47 
 
 
562 aa  295  2e-78  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0245477 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  46.27 
 
 
565 aa  294  3e-78  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_010511  M446_6589  methyl-accepting chemotaxis sensory transducer  41.02 
 
 
558 aa  294  3e-78  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.396718 
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  50.43 
 
 
608 aa  293  4e-78  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_007643  Rru_A0718  chemotaxis sensory transducer  53.01 
 
 
669 aa  293  6e-78  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.845917  n/a   
 
 
-
 
NC_011757  Mchl_5373  methyl-accepting chemotaxis sensory transducer  41.49 
 
 
565 aa  292  9e-78  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.620524  normal  0.472724 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  50.28 
 
 
675 aa  292  1e-77  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_010725  Mpop_2242  methyl-accepting chemotaxis sensory transducer  41.81 
 
 
562 aa  291  2e-77  Methylobacterium populi BJ001  Bacteria  normal  0.0448901  normal  0.213644 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  48.15 
 
 
656 aa  291  2e-77  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  42 
 
 
673 aa  289  8e-77  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  46.65 
 
 
565 aa  289  8e-77  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  41.96 
 
 
568 aa  289  1e-76  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  46.7 
 
 
672 aa  289  1e-76  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010517  Mrad2831_6434  methyl-accepting chemotaxis sensory transducer  52.51 
 
 
557 aa  288  2e-76  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_010505  Mrad2831_0796  methyl-accepting chemotaxis sensory transducer  41.59 
 
 
558 aa  287  2.9999999999999996e-76  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.579527 
 
 
-
 
NC_007643  Rru_A0568  chemotaxis sensory transducer  48.94 
 
 
662 aa  286  5.999999999999999e-76  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3733  methyl-accepting chemotaxis sensory transducer  38.99 
 
 
558 aa  286  5.999999999999999e-76  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.152196  normal 
 
 
-
 
NC_010172  Mext_3424  chemotaxis sensory transducer  38.99 
 
 
558 aa  286  5.999999999999999e-76  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.574813 
 
 
-
 
NC_007778  RPB_1316  methyl-accepting chemotaxis sensory transducer  49.48 
 
 
561 aa  286  7e-76  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.234166 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  41.36 
 
 
568 aa  286  9e-76  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  48.3 
 
 
689 aa  286  1.0000000000000001e-75  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  40.41 
 
 
656 aa  285  1.0000000000000001e-75  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  50.14 
 
 
558 aa  285  2.0000000000000002e-75  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_007778  RPB_2961  methyl-accepting chemotaxis sensory transducer  50.8 
 
 
563 aa  285  2.0000000000000002e-75  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_5403  methyl-accepting chemotaxis sensory transducer  52.05 
 
 
538 aa  285  2.0000000000000002e-75  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  39.22 
 
 
561 aa  285  2.0000000000000002e-75  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  48.04 
 
 
565 aa  284  3.0000000000000004e-75  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  46.67 
 
 
688 aa  284  3.0000000000000004e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  46.58 
 
 
674 aa  284  3.0000000000000004e-75  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  49.87 
 
 
655 aa  284  4.0000000000000003e-75  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>