Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2846 |
Symbol | |
ID | 3970074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3089337 |
End bp | 3091034 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637925958 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_532713 |
Protein GI | 90424343 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.430745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTAC TCAGCCGATT CACAATTCGC ACCAAAATTT CCAGCATGGT GCTGCTATCG GCTGCGGCCG TTTGCGTCAC CGTCGCGGTG GCCGCCTCGC TCAGCCAGAG CCGCATGATG CACGACCGCA CTGCGGAATT GCGCTCGGTG GTGGATATCG TCACCGGCCT GGCGACATCG CTGCAGAACG AGGTGATCGC CGGCAAGCTC ACTCAGGCGG AAGCGGAGCT GCAATTTCGC GCCCGCGCCG CGGGGATGAG GTTCAGCGCC GGACAGGGCT ATCCGGCGGC TTACCGGGTG ACGAACCTCA GCGTGATGAT GAACGCGTCC GACGCCAAGC TGGAAGACAA GATCACCGGC ACCAAAGATT CCAACGGCGT GGAAGTCACG AGATCGATCG TCGAAGCCGC TGTGGCCAAC AGCGAGGGAG GCACCACCAC CTACCTCTGG CCGCGGCCGG GACAGGTCAC GCCGATCACC AAATTGGTGT TCGCGCGGGT GTTTAAACCG TGGAATATCG CCATCGCCGC CGGCATCTAT GTCGACGATC TCGACGCCGA CGTCCGCGCG CTGCTGATCA AGCTCAGTTC GATCGGCGCC GGCGTCCTGG CGCTGATGGG GCTGCTGTCG TGGCTGATCG CCCGCGACGT GCTGGGTGCC TTGCAGCGGC AACAGACCCG CATGCAGAAC ATCGCCACCG GATCGCTCGA CGAGGTGGTC GGCGAGACCG ACCGCGGCGA CGAGATCGGC CGGATGGCCG AGACGCTGGA AATGCTGCGC AAGACCGCCC TCACCGCGCG CAACCTGGAG AGCGAACAGG CGGTGTTGAA GCAGCGCAGC GAAACCGAAA AGCGCGAGGC GCTGCTGGCG CTGGCCGATC GCTTCGATGC CTCGGTCGGC CATCTGGTCG GGCTGATGGC CTCGAGCTCG TCCGATCTGG AAACCACCGC GCGGTCGATG ACCGGCACCG CGGATCGCAC CAATCAGCAG GCCACCGTGG TGTCGTCGGC CGCCGAAGAA GCCAGCACGC GGGTGCAGAC CGTGGCCTCG GCGGCGGAAG AACTCACCTC GTCGATCACC GAGATCAGCC GCCAGGTCGC GCAATCGGCA AAAATCAGCA GCCACGCGGT GGAGAGCGCA AGGCGCACCG ACACCATCGT CCGCGCGCTG TCGGACGGCG CCCAGCAGAT CGAACACGTC GCCGAATTGA TCTCCAGCAT CGCCGGCCAG ACCAACCTGC TGGCGCTCAA CGCCACCATC GAGGCGGCGC GTGCCGGCGA CGCCGGCCGC GGCTTTGCGG TGGTCGCCTC CGAAGTCAAG AGCCTGGCCG GGCAGACCGC GGAAGCCACC AAGGAGATCG GCAACCGCAT CGCGCAGATC CAGGCCGCCA CCAAGGAGGC CGTCAGCGCG ATCGAAGGCA TCACCGCCAC TATCGAAGAA GTCAGCGCGA TCGCCACCAC GATCGCCTCG GCGATCGAGG AGCAAGGCGC CGCCACCGCC GAGATCGCCC GCAACGTCAC CCAGACCGCG CAGGCGACCC AGGCCGTCAC CACCAATATC GGCGGCGTCA GCACCGCCGC CAACGAGACC GGCGGCGCCG CCAATCTGGT GCTCAGTTCG GCCGCCAACC TGTCGAAGCA GGCCGGACAG CTCTCCGGCG AGGTCAACAC CTTCCTCGCC GGCGTCCGCG CCGCCTGA
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Protein sequence | MNLLSRFTIR TKISSMVLLS AAAVCVTVAV AASLSQSRMM HDRTAELRSV VDIVTGLATS LQNEVIAGKL TQAEAELQFR ARAAGMRFSA GQGYPAAYRV TNLSVMMNAS DAKLEDKITG TKDSNGVEVT RSIVEAAVAN SEGGTTTYLW PRPGQVTPIT KLVFARVFKP WNIAIAAGIY VDDLDADVRA LLIKLSSIGA GVLALMGLLS WLIARDVLGA LQRQQTRMQN IATGSLDEVV GETDRGDEIG RMAETLEMLR KTALTARNLE SEQAVLKQRS ETEKREALLA LADRFDASVG HLVGLMASSS SDLETTARSM TGTADRTNQQ ATVVSSAAEE ASTRVQTVAS AAEELTSSIT EISRQVAQSA KISSHAVESA RRTDTIVRAL SDGAQQIEHV AELISSIAGQ TNLLALNATI EAARAGDAGR GFAVVASEVK SLAGQTAEAT KEIGNRIAQI QAATKEAVSA IEGITATIEE VSAIATTIAS AIEEQGAATA EIARNVTQTA QATQAVTTNI GGVSTAANET GGAANLVLSS AANLSKQAGQ LSGEVNTFLA GVRAA
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