Gene RPC_2846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2846 
Symbol 
ID3970074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3089337 
End bp3091034 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content67% 
IMG OID637925958 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_532713 
Protein GI90424343 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.430745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTAC TCAGCCGATT CACAATTCGC ACCAAAATTT CCAGCATGGT GCTGCTATCG 
GCTGCGGCCG TTTGCGTCAC CGTCGCGGTG GCCGCCTCGC TCAGCCAGAG CCGCATGATG
CACGACCGCA CTGCGGAATT GCGCTCGGTG GTGGATATCG TCACCGGCCT GGCGACATCG
CTGCAGAACG AGGTGATCGC CGGCAAGCTC ACTCAGGCGG AAGCGGAGCT GCAATTTCGC
GCCCGCGCCG CGGGGATGAG GTTCAGCGCC GGACAGGGCT ATCCGGCGGC TTACCGGGTG
ACGAACCTCA GCGTGATGAT GAACGCGTCC GACGCCAAGC TGGAAGACAA GATCACCGGC
ACCAAAGATT CCAACGGCGT GGAAGTCACG AGATCGATCG TCGAAGCCGC TGTGGCCAAC
AGCGAGGGAG GCACCACCAC CTACCTCTGG CCGCGGCCGG GACAGGTCAC GCCGATCACC
AAATTGGTGT TCGCGCGGGT GTTTAAACCG TGGAATATCG CCATCGCCGC CGGCATCTAT
GTCGACGATC TCGACGCCGA CGTCCGCGCG CTGCTGATCA AGCTCAGTTC GATCGGCGCC
GGCGTCCTGG CGCTGATGGG GCTGCTGTCG TGGCTGATCG CCCGCGACGT GCTGGGTGCC
TTGCAGCGGC AACAGACCCG CATGCAGAAC ATCGCCACCG GATCGCTCGA CGAGGTGGTC
GGCGAGACCG ACCGCGGCGA CGAGATCGGC CGGATGGCCG AGACGCTGGA AATGCTGCGC
AAGACCGCCC TCACCGCGCG CAACCTGGAG AGCGAACAGG CGGTGTTGAA GCAGCGCAGC
GAAACCGAAA AGCGCGAGGC GCTGCTGGCG CTGGCCGATC GCTTCGATGC CTCGGTCGGC
CATCTGGTCG GGCTGATGGC CTCGAGCTCG TCCGATCTGG AAACCACCGC GCGGTCGATG
ACCGGCACCG CGGATCGCAC CAATCAGCAG GCCACCGTGG TGTCGTCGGC CGCCGAAGAA
GCCAGCACGC GGGTGCAGAC CGTGGCCTCG GCGGCGGAAG AACTCACCTC GTCGATCACC
GAGATCAGCC GCCAGGTCGC GCAATCGGCA AAAATCAGCA GCCACGCGGT GGAGAGCGCA
AGGCGCACCG ACACCATCGT CCGCGCGCTG TCGGACGGCG CCCAGCAGAT CGAACACGTC
GCCGAATTGA TCTCCAGCAT CGCCGGCCAG ACCAACCTGC TGGCGCTCAA CGCCACCATC
GAGGCGGCGC GTGCCGGCGA CGCCGGCCGC GGCTTTGCGG TGGTCGCCTC CGAAGTCAAG
AGCCTGGCCG GGCAGACCGC GGAAGCCACC AAGGAGATCG GCAACCGCAT CGCGCAGATC
CAGGCCGCCA CCAAGGAGGC CGTCAGCGCG ATCGAAGGCA TCACCGCCAC TATCGAAGAA
GTCAGCGCGA TCGCCACCAC GATCGCCTCG GCGATCGAGG AGCAAGGCGC CGCCACCGCC
GAGATCGCCC GCAACGTCAC CCAGACCGCG CAGGCGACCC AGGCCGTCAC CACCAATATC
GGCGGCGTCA GCACCGCCGC CAACGAGACC GGCGGCGCCG CCAATCTGGT GCTCAGTTCG
GCCGCCAACC TGTCGAAGCA GGCCGGACAG CTCTCCGGCG AGGTCAACAC CTTCCTCGCC
GGCGTCCGCG CCGCCTGA
 
Protein sequence
MNLLSRFTIR TKISSMVLLS AAAVCVTVAV AASLSQSRMM HDRTAELRSV VDIVTGLATS 
LQNEVIAGKL TQAEAELQFR ARAAGMRFSA GQGYPAAYRV TNLSVMMNAS DAKLEDKITG
TKDSNGVEVT RSIVEAAVAN SEGGTTTYLW PRPGQVTPIT KLVFARVFKP WNIAIAAGIY
VDDLDADVRA LLIKLSSIGA GVLALMGLLS WLIARDVLGA LQRQQTRMQN IATGSLDEVV
GETDRGDEIG RMAETLEMLR KTALTARNLE SEQAVLKQRS ETEKREALLA LADRFDASVG
HLVGLMASSS SDLETTARSM TGTADRTNQQ ATVVSSAAEE ASTRVQTVAS AAEELTSSIT
EISRQVAQSA KISSHAVESA RRTDTIVRAL SDGAQQIEHV AELISSIAGQ TNLLALNATI
EAARAGDAGR GFAVVASEVK SLAGQTAEAT KEIGNRIAQI QAATKEAVSA IEGITATIEE
VSAIATTIAS AIEEQGAATA EIARNVTQTA QATQAVTTNI GGVSTAANET GGAANLVLSS
AANLSKQAGQ LSGEVNTFLA GVRAA