| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_2091 |
|---|
| Symbol | |
|---|
| ID | 6134772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 2338917 |
|---|
| End bp | 2340605 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641642320 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001768988 |
|---|
| Protein GI | 170740333 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0245477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTCC TCCTCAACCT CCGCATCGTC ACGAAGCTCC TCGTCGTCTT CGCGGCTTTC
ATCGGCGCGG CCGGCCTGTT CTCTCTCACC GGCTGGCGCA GCCTCGCCAC GATCGAGGAG
GCGAATGACT GGCGCGACCA CACTTACCAA GTGCTCGCGC AGGTCGAGGT GCTCACCACG
GCGATGGTCA ACCAGGAGAC GGGCGTGCGC GGCTACCTGC TGGCCGCGGA TGCGAAATTC
CTGGAGCCCT ACAACGCGGG CGGCCGCGCC TTCACGGAAG CCATGGCCAG GGTCCGCGCC
CTCGTCTCCG ACAATCCCGC CCAGCTCCAG CGCCTGGACG GCCTCGAGCG CCACGCGCAG
GACTGGCGCG GCACGATCGC CGAGCGCGAG ATCGCGCTGA TGAGGGACGA GCAGACCCGC
GCAGAGGCCC GGCAGCTGGA GATCTCGGGG GCCGGAAAGG TGCTGATGGA CGCGGTGCGC
GCCAAGGCCG CGGAGATCGC GCGGATCGAG CGCACCCTTC TGGAGGAGCG CTCCCGCACC
GCCGCTCAGG CGGCCAGCAG CTCGCGGCAG GCCGTCATGC TCGGCATGGG AGCGATGCTG
GCGGTGGCGG CCCTCGGACT GGTGCTGCTG AACTGGACCG TCTCGGCCCC GATCCGGCAG
ATGACGGCCG TGATGGGCGA ACTCGCCAGG GGAGAGACCG GCACGGCGGT GCCGTTCCAG
GAGCGTCGCG AGGAGGTCGG CGCGATGGCG GTTGCCGTGC AGGTGTTCCG GGAGAACATC
ATCCGGACGC GGCAGCTGGA GGAGGAGACG GCGCTGGCCC GCGCCTCCGC CGAGGAGCAG
CGCAAGGCCG GCATGCGCCA GATGGCCGAC AGCTTCGAGG CGGCGGTGGG CGGGATCGTC
GGCACGGTCA CCTCCTCGGC GACCGAGCTG CAGGCCACGT CCCAGAGCAT GACCGCGACG
GCGACCGAGA CGGCGAGGCG GACCACGACG GTCGCGACCG CCGCCGAGGA GGCGGCCACC
AACGTCAACA CCGTGGCGAC GGCGGCCGAG GAACTGGGCG CCTCCGTGCA GGAGATCGGC
CGGCAGGCCG ACGGCGCGAG CGACCTTGCC CAGCAGGCGG TGGGCGAGGC GGACCAGACC
GCGGCGCTCG TGCAGGAGCT CAGCGGGGCG GTGGCGAAGA TCGGCGACGT GGTTGGGCTG
ATCTCCAACA TCGCCAGCCA GACCAACCTG CTGGCGCTGA ATGCGACGAT CGAGGCGGCC
CGGGCGGGCG AGGCCGGACG CGGCTTCGCG GTGGTGGCCG CCGAGGTCAA GGAACTCGCC
TCGCAGACCG CCCGCGCGAC CGAGGAGATC TCGGGACAGA TCGGCCAGAT CCAGGGTGCG
ACCGGGCGGG CCGTCACGGC CATCGGGTCG ATCACGGGGC GCATCCGCGA GATCAGCACG
GTCGCCACGA CGATCGCCGC CGCCGTCGAG CAGCAGGGTT CGGCCACCCA GGAGATCGTC
CGCAACGTCG CCCTCGCCTC GACCGGAACC ACGGACGTCA CCAGCAACAT CATCAGCGTG
GCGCGCGCCT CGGAGGAGAC CGGGGCCGCG GCCTCCCAGG TCCTGGCCTC GGCGTCCGAA
TTGTCGCGCC AGTCCGAGCA CCTCAAGGCC GAGGTCTCGC AGTTCCTGGC GACCGTGCGG
GCCGCCTGA
|
|---|
| Protein sequence | MRVLLNLRIV TKLLVVFAAF IGAAGLFSLT GWRSLATIEE ANDWRDHTYQ VLAQVEVLTT
AMVNQETGVR GYLLAADAKF LEPYNAGGRA FTEAMARVRA LVSDNPAQLQ RLDGLERHAQ
DWRGTIAERE IALMRDEQTR AEARQLEISG AGKVLMDAVR AKAAEIARIE RTLLEERSRT
AAQAASSSRQ AVMLGMGAML AVAALGLVLL NWTVSAPIRQ MTAVMGELAR GETGTAVPFQ
ERREEVGAMA VAVQVFRENI IRTRQLEEET ALARASAEEQ RKAGMRQMAD SFEAAVGGIV
GTVTSSATEL QATSQSMTAT ATETARRTTT VATAAEEAAT NVNTVATAAE ELGASVQEIG
RQADGASDLA QQAVGEADQT AALVQELSGA VAKIGDVVGL ISNIASQTNL LALNATIEAA
RAGEAGRGFA VVAAEVKELA SQTARATEEI SGQIGQIQGA TGRAVTAIGS ITGRIREIST
VATTIAAAVE QQGSATQEIV RNVALASTGT TDVTSNIISV ARASEETGAA ASQVLASASE
LSRQSEHLKA EVSQFLATVR AA
|
|---|
| |