More than 300 homologs were found in PanDaTox collection
for query gene Rru_A2076 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A2076  chemotaxis sensory transducer  100 
 
 
561 aa  1107    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.723039  n/a   
 
 
-
 
NC_007643  Rru_A2078  chemotaxis sensory transducer  86.99 
 
 
561 aa  912    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.960991  n/a   
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  42.48 
 
 
562 aa  386  1e-106  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  40.32 
 
 
562 aa  364  3e-99  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007643  Rru_A3563  chemotaxis sensory transducer  42.36 
 
 
563 aa  359  9e-98  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  42.05 
 
 
561 aa  331  3e-89  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  41.7 
 
 
561 aa  327  3e-88  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  37.48 
 
 
563 aa  317  3e-85  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  38.42 
 
 
566 aa  317  4e-85  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  38.74 
 
 
566 aa  316  7e-85  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  42.12 
 
 
561 aa  315  1.9999999999999998e-84  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_010725  Mpop_4549  methyl-accepting chemotaxis sensory transducer  43.56 
 
 
561 aa  311  2e-83  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  38 
 
 
561 aa  310  5e-83  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
563 aa  308  1.0000000000000001e-82  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_007958  RPD_0336  chemotaxis sensory transducer  37.59 
 
 
563 aa  308  1.0000000000000001e-82  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3424  chemotaxis sensory transducer  42.02 
 
 
558 aa  306  5.0000000000000004e-82  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.574813 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  37.68 
 
 
563 aa  306  6e-82  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3733  methyl-accepting chemotaxis sensory transducer  42.02 
 
 
558 aa  306  7e-82  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.152196  normal 
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  41.99 
 
 
563 aa  306  9.000000000000001e-82  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  38.26 
 
 
560 aa  305  1.0000000000000001e-81  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  36.81 
 
 
563 aa  305  1.0000000000000001e-81  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  40 
 
 
566 aa  302  9e-81  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2346  methyl-accepting chemotaxis sensory transducer  40.25 
 
 
556 aa  302  1e-80  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.395485 
 
 
-
 
NC_007778  RPB_0489  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
564 aa  301  2e-80  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.301128  normal 
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  54.11 
 
 
608 aa  301  2e-80  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  49.19 
 
 
573 aa  301  2e-80  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  35.9 
 
 
563 aa  301  2e-80  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2072  chemotaxis sensory transducer  40.07 
 
 
556 aa  301  3e-80  Methylobacterium extorquens PA1  Bacteria  normal  0.68132  normal  0.341201 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  37.17 
 
 
563 aa  301  3e-80  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  37.98 
 
 
563 aa  300  5e-80  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  38.53 
 
 
565 aa  299  1e-79  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  46.73 
 
 
655 aa  299  1e-79  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  37.37 
 
 
563 aa  299  1e-79  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  54.11 
 
 
558 aa  298  2e-79  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  35.66 
 
 
563 aa  298  2e-79  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
561 aa  298  2e-79  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  42.56 
 
 
566 aa  297  3e-79  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  48.79 
 
 
563 aa  297  3e-79  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  49.73 
 
 
567 aa  297  3e-79  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_010725  Mpop_0741  methyl-accepting chemotaxis sensory transducer  53.6 
 
 
558 aa  294  2e-78  Methylobacterium populi BJ001  Bacteria  normal  0.532986  normal 
 
 
-
 
NC_007643  Rru_A1408  chemotaxis sensory transducer  44.71 
 
 
568 aa  294  3e-78  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.591131  n/a   
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  47.31 
 
 
565 aa  293  4e-78  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  36.97 
 
 
561 aa  293  8e-78  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  47.44 
 
 
694 aa  292  1e-77  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  50 
 
 
562 aa  291  2e-77  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  49.73 
 
 
562 aa  291  2e-77  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
562 aa  291  2e-77  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  48.19 
 
 
562 aa  290  4e-77  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  47.35 
 
 
561 aa  290  5.0000000000000004e-77  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  48.47 
 
 
691 aa  289  8e-77  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  46.17 
 
 
673 aa  289  9e-77  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_010505  Mrad2831_2972  methyl-accepting chemotaxis sensory transducer  40.98 
 
 
563 aa  288  1e-76  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6589  methyl-accepting chemotaxis sensory transducer  40.75 
 
 
558 aa  288  2e-76  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.396718 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  38.98 
 
 
566 aa  287  2.9999999999999996e-76  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2799  putative receptor/sensory transducer  51.73 
 
 
707 aa  287  4e-76  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0655652  normal 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  45.1 
 
 
674 aa  286  5e-76  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  36.56 
 
 
561 aa  286  5.999999999999999e-76  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_011757  Mchl_4435  methyl-accepting chemotaxis sensory transducer  43.19 
 
 
561 aa  286  1.0000000000000001e-75  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0198477  normal 
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  45.06 
 
 
688 aa  285  1.0000000000000001e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  45.62 
 
 
563 aa  285  2.0000000000000002e-75  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2555  chemotaxis sensory transducer  39.72 
 
 
561 aa  285  2.0000000000000002e-75  Methylobacterium extorquens PA1  Bacteria  normal  0.834906  normal 
 
 
-
 
NC_010172  Mext_4068  chemotaxis sensory transducer  42.65 
 
 
591 aa  285  2.0000000000000002e-75  Methylobacterium extorquens PA1  Bacteria  normal  0.269414  normal 
 
 
-
 
NC_009485  BBta_2902  methyl-accepting chemotaxis sensory transducer  36.99 
 
 
563 aa  285  2.0000000000000002e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.32606  normal  0.0943242 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  38.15 
 
 
561 aa  284  3.0000000000000004e-75  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  47.04 
 
 
672 aa  284  3.0000000000000004e-75  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  36.59 
 
 
563 aa  283  4.0000000000000003e-75  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  45.95 
 
 
688 aa  283  6.000000000000001e-75  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  47.71 
 
 
675 aa  283  7.000000000000001e-75  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_007643  Rru_A1160  chemotaxis sensory transducer  49.19 
 
 
559 aa  283  8.000000000000001e-75  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  46.09 
 
 
542 aa  283  8.000000000000001e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_009485  BBta_1388  methyl-accepting chemotaxis sensory transducer  46.35 
 
 
656 aa  282  1e-74  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0527529  normal  0.207734 
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  46.88 
 
 
565 aa  282  1e-74  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  44.53 
 
 
656 aa  282  1e-74  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_010511  M446_0383  methyl-accepting chemotaxis sensory transducer  48.96 
 
 
559 aa  280  5e-74  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.50218 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  46.03 
 
 
688 aa  280  6e-74  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  46.46 
 
 
689 aa  280  6e-74  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_010517  Mrad2831_6434  methyl-accepting chemotaxis sensory transducer  51.34 
 
 
557 aa  278  2e-73  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_007643  Rru_A0718  chemotaxis sensory transducer  47.54 
 
 
669 aa  278  2e-73  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.845917  n/a   
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  47.59 
 
 
567 aa  278  2e-73  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1316  methyl-accepting chemotaxis sensory transducer  42.09 
 
 
561 aa  277  3e-73  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.234166 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  45.95 
 
 
688 aa  278  3e-73  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  45.09 
 
 
656 aa  278  3e-73  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  45.41 
 
 
572 aa  277  4e-73  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  47.11 
 
 
675 aa  277  5e-73  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_009485  BBta_2843  putative histidine kinase, HAMP region  47.34 
 
 
682 aa  276  5e-73  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  47.95 
 
 
561 aa  276  9e-73  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0713  methyl-accepting chemotaxis sensory transducer  46.42 
 
 
685 aa  276  9e-73  Maricaulis maris MCS10  Bacteria  normal  normal  0.862704 
 
 
-
 
NC_011757  Mchl_2778  methyl-accepting chemotaxis sensory transducer  39.01 
 
 
558 aa  276  9e-73  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.060825  normal 
 
 
-
 
NC_010725  Mpop_4199  methyl-accepting chemotaxis sensory transducer  39.05 
 
 
568 aa  275  1.0000000000000001e-72  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  39.39 
 
 
691 aa  276  1.0000000000000001e-72  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_010172  Mext_0667  chemotaxis sensory transducer  38.83 
 
 
565 aa  275  1.0000000000000001e-72  Methylobacterium extorquens PA1  Bacteria  normal  0.510632  normal  0.195802 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  41.74 
 
 
731 aa  275  2.0000000000000002e-72  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  47.44 
 
 
602 aa  275  2.0000000000000002e-72  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  48.01 
 
 
564 aa  274  3e-72  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_007643  Rru_A3665  chemotaxis sensory transducer  48.86 
 
 
567 aa  274  3e-72  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2546  chemotaxis sensory transducer  48.14 
 
 
690 aa  273  5.000000000000001e-72  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0679  methyl-accepting chemotaxis sensory transducer  38.83 
 
 
565 aa  273  5.000000000000001e-72  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0248904 
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  36.4 
 
 
561 aa  273  7e-72  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  44.66 
 
 
561 aa  272  1e-71  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  43.63 
 
 
691 aa  272  1e-71  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
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