Gene Rru_A3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3563 
Symbol 
ID3837018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp4105626 
End bp4107317 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content55% 
IMG OID637827686 
Productchemotaxis sensory transducer 
Protein accessionYP_428644 
Protein GI83594892 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCCG TTATCAATAA TATAAAAATC CCCATGAAAC TGGCCGGTGC GTTTTTTACG 
CTCATTTTCA TATTTTTGTT CAGTGGCGTG ATATCGCTTT ACTTGATGAA TGATATGGAT
GATGCAACAG CCGATATAAC GGATAATTGG CACCTCACGA TTACCAGCTT GGATAATATC
GAAAAAACCC TGATTGAATA CCGGCGTTGG GAACAAACCT TGGCTGCGGC AAGAACACCA
GATCAAAGTG ATCGAGCCGA TAAGATGCTT ACCAAGACTC GTGTGGTGTT GTCGGAAATT
TCTAAAAATC ATTTGAAGTA TCTTGCTAGT AAAAGAGAAG CTGATATTTA TAATGAATTC
GTTTCATATC TCCAGCCATT CTTTCAAGAA AGCGATAAGG CCCGAGAATT TGCTAAAAAA
GGCGATGCAA GCCAAGTAAA TACCGTTCTC TTGGGCGAAA GCTATGTGAT TATTGGAAAA
ATGCAAACGG TCCTGGATAG TCTTGTCCAA CTGAACGCCG AGGGAATGAA AGCCGCGAAC
CAGCGGCAAG ACGACAGCTA TGAAACGGCC AAGATCGTCA CTTATTTCGT CTTGACCTTC
GCCACCATAA TCGCCGTGCT AGCGGGTTTG ATTTTACGAT CGGCGATCGC CAAGCCGGTG
TCGGCGATGA CCGAGGCGAT GAAGCGCTTG GCCGAGGGCG ACAAGAGCAT CGATATTCCG
GCAAGGGGGC GCCGCGACGA AATCGGCGCC ATGGCTGAAG CCGTTCAGGT GTTCAAGGAG
AACGCCATCC GCGCCGACCG TTTGGCGGAG GATCAGCGCA AGGAGCAGGC CGCCCGCACG
GCGCGCGCCC AAACTATCGA AACGCTGACG ACGAATTTCG ACGGTAAAAT ATCAAACCTG
CTGACGCTGG TTGAGGGGGC TCTCACCGAA CTCAACGCCA CCGCCCAGAC GATGCAGAGC
AATTCGGAAC GGGCTAGCCA ACAGGCCACG ACCGTGGCTG CGGCATCGGA ACAGGCCTCG
ACCAATGTTC AAACCGTGGC CAGCGCCGCC GAGGAGCTTT CCAATGCCAT CGTCGAGATC
GGTCGTCAGG TCGAACGCTC GAGCGCGACA TCGAAGGCGG CCTCCGAAGA GGCGGAACGG
ACCAACAAGA TCGTTCTTAG TCTGGCCGAC AGCTCGCTCA AGATCGGTGA CGTCATCGGC
CTGATCAATG ATATCGCCAG CCAGACCAAT CTTCTGGCGC TGAACGCCAC GATCGAGGCG
GCCCGCGCCG GCGACGCCGG GAAAGGCTTC GCCGTGGTCG CCGGCGAGGT GAAATCCCTG
GCCAATCAAA CGGCCAAAGC CACCGAGGGA ATTACCGCCC AGATCGGCAG TGTCCAGTCG
GCCACCCAGG AAGCGGTGAC CGCCATTAAC GGCATTTCAA CCCGCATCGG CGAAATCAAC
GAGATTTCAA CGGGGATCGC CGCCGCGGTC GAGGAACAAT CGGCGGCGAC GGGCGAAATC
GCCCGAAATG CCCAGCAGGC GGCCCAGGGA ACCCAGGAGA TTTCGGCCAA TAACGCCGGC
ATGACCCAGA CCTCCAGGGA AACCGGCGCG GCGTCGGGGC GGGTGCTGTC CGCGGCTCAG
GCCTTGGAAA AGGAAACCGC CAGTCTCAAG GACGTCGTCG CCAGCTTTTT GGACGGTGTG
CGATCGGCCT GA
 
Protein sequence
MMSVINNIKI PMKLAGAFFT LIFIFLFSGV ISLYLMNDMD DATADITDNW HLTITSLDNI 
EKTLIEYRRW EQTLAAARTP DQSDRADKML TKTRVVLSEI SKNHLKYLAS KREADIYNEF
VSYLQPFFQE SDKAREFAKK GDASQVNTVL LGESYVIIGK MQTVLDSLVQ LNAEGMKAAN
QRQDDSYETA KIVTYFVLTF ATIIAVLAGL ILRSAIAKPV SAMTEAMKRL AEGDKSIDIP
ARGRRDEIGA MAEAVQVFKE NAIRADRLAE DQRKEQAART ARAQTIETLT TNFDGKISNL
LTLVEGALTE LNATAQTMQS NSERASQQAT TVAAASEQAS TNVQTVASAA EELSNAIVEI
GRQVERSSAT SKAASEEAER TNKIVLSLAD SSLKIGDVIG LINDIASQTN LLALNATIEA
ARAGDAGKGF AVVAGEVKSL ANQTAKATEG ITAQIGSVQS ATQEAVTAIN GISTRIGEIN
EISTGIAAAV EEQSAATGEI ARNAQQAAQG TQEISANNAG MTQTSRETGA ASGRVLSAAQ
ALEKETASLK DVVASFLDGV RSA