Gene Mpop_5403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5403 
Symbol 
ID6313951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5780552 
End bp5782168 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content72% 
IMG OID642654085 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001928030 
Protein GI188584585 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCTGG CCGGTCGCGT GGCGCTCCTC GGCAGCTTCT TCGTGCTGCT CGCGAGCCTG 
ACCGTCGGCG GCTATCTGCT GTTCGAGGCG CGCGCCGTCA TGCACGCTCG TGCCGCAGAT
GCGCTCGACA GCAGCATGCG GTTGCTCCGA GCCGGCATCG AGCAGGAGGC CGCGGGCGCG
GATCTCACGC GCGCCGTCGA TCGGGTCGAG AGTGTCACGG GAGGCACCGC AACGGTCTTC
ACCGGCGAGG TTCGCTCCGC CACCACCGTT CGCAAGCCCG ACGGCGGCCG CGCCGTCGGC
ACCCGGCTCG CGCCCGGCCC TGTCCACGAC ACGGTACTCG GCCTCGGCAA GACGTATCGC
GGTGAGGCCG ACATCCTCGG CACGTCCTAC CTCACGCTCT ACGAGCCGCT CCTCGGCACG
GACGGGCACG CCACCGGCAT CGTCTATGTC GGATTGAAGC GGGCCGATGT CCTCGCCGGG
CTCGACCGGA TGATGTGGCA GGCGGCTCTG GTCGGCGGCG GGATGATCCT CGCCGCGATG
GTTCTCCTCC GACTCGCGAT CCGTCGGACC CTGCGCCCGC TCGACGGGCT CGGTATCGCG
ATGACGCGGC TTGCCGACGG TGACGTGACG GTGGCGGTGC TTGGCCTGGA CCGGCGCGAT
GAGGTCGGCC GCATGGCCGC CGCCGTGCAG GTGTTCAAGG ACAGCCTGAT CCGAAACCGG
CACTTGGAAC AGGAAGGGGC CGGCGCCCGC GCCGCTGCCG AGATCGAGCG CCGACACGCG
CTCGACGCGA TGGCCGAAGG GTTCGAACAG GCGGTCGGCG GCATCGTCGG CATGGTGGCG
TCCTCCGCCA CCGAGTTGCA GGTCACTGCC GAGGCCATGG CGGCGACCGC GCGGCAGACG
GCGAGCCGCT CCGGTCATGT CGCCGAGGCC GCCGAGGAAG CCGCCGCAAA TGTCGGAACC
GTGGCGGCGG CGGCTGAGCA GCTCGGCGCT TCGGTGCAGG AGATCGGCCG CCAGGTGTCG
AACTCGTCCG ATCTCGCCGC GATCGCCGTC TCCGAGGCGG ATCGCACCGG GATCCTGGTC
TACGAACTCG ACGCGGTCGT CAGCCGGATC GGCGACGTGG TCGGCCTGAT CGCGACCATT
GCCGGTCAGA CCAACCTGCT CGCGCTCAAC GCCACCATCG AGGCGGCGCG GGCGGGTGAC
GCGGGCCGGG GCTTCGCCGT CGTCGCGGCG GAGGTGAAGG AACTCGCCAA CCAGACGGCC
CGGGCGACCG AGGAAATCTC CGGGCAGATC GGGCGGGTTC AGGGCGCGAC CGGACAGGCC
GTTGCGGCGA TCGGTGGCAT CACCGCCCGC ATCCGCGAGA TCAGCGGCGT CGCCACCGGC
ATCGCGGCGG CGGTCGAGCA GCAGGGTGCG GCCACCCAGG AGATCGTGCG CAACGTCGCC
CGGGCCGCGA CCGGCACCGG TGCGGTGACG TCGAACATCG TCGGCGTGGC GTGCGCCTCC
GACGAGACCG GAGCGGCGGC CGCCCAGGTG CTCGCCTCGG CCTCGGAGCT GTCGCGGCGA
TCCGAGCATC TGAGCGCGGA AGTGGCCCGA TTCCTCGGCA CGGTGCGAGC GGCCTGA
 
Protein sequence
MSLAGRVALL GSFFVLLASL TVGGYLLFEA RAVMHARAAD ALDSSMRLLR AGIEQEAAGA 
DLTRAVDRVE SVTGGTATVF TGEVRSATTV RKPDGGRAVG TRLAPGPVHD TVLGLGKTYR
GEADILGTSY LTLYEPLLGT DGHATGIVYV GLKRADVLAG LDRMMWQAAL VGGGMILAAM
VLLRLAIRRT LRPLDGLGIA MTRLADGDVT VAVLGLDRRD EVGRMAAAVQ VFKDSLIRNR
HLEQEGAGAR AAAEIERRHA LDAMAEGFEQ AVGGIVGMVA SSATELQVTA EAMAATARQT
ASRSGHVAEA AEEAAANVGT VAAAAEQLGA SVQEIGRQVS NSSDLAAIAV SEADRTGILV
YELDAVVSRI GDVVGLIATI AGQTNLLALN ATIEAARAGD AGRGFAVVAA EVKELANQTA
RATEEISGQI GRVQGATGQA VAAIGGITAR IREISGVATG IAAAVEQQGA ATQEIVRNVA
RAATGTGAVT SNIVGVACAS DETGAAAAQV LASASELSRR SEHLSAEVAR FLGTVRAA