More than 300 homologs were found in PanDaTox collection
for query gene Rru_A0568 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A0568  chemotaxis sensory transducer  100 
 
 
662 aa  1314    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  33.14 
 
 
688 aa  309  1.0000000000000001e-82  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
562 aa  305  1.0000000000000001e-81  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  43.69 
 
 
688 aa  305  2.0000000000000002e-81  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  33.92 
 
 
689 aa  303  8.000000000000001e-81  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  44.65 
 
 
566 aa  302  2e-80  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  45.83 
 
 
562 aa  300  4e-80  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  44.68 
 
 
566 aa  299  1e-79  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  45.73 
 
 
567 aa  298  2e-79  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  40.9 
 
 
563 aa  296  1e-78  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_010511  M446_0383  methyl-accepting chemotaxis sensory transducer  46.79 
 
 
559 aa  295  1e-78  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.50218 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  46.69 
 
 
561 aa  295  2e-78  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  44.59 
 
 
566 aa  293  5e-78  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
573 aa  291  2e-77  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  44.75 
 
 
565 aa  292  2e-77  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  43.72 
 
 
688 aa  291  3e-77  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  44.92 
 
 
566 aa  291  4e-77  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  45.89 
 
 
577 aa  290  6e-77  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1408  chemotaxis sensory transducer  45.74 
 
 
568 aa  289  1e-76  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.591131  n/a   
 
 
-
 
NC_010172  Mext_3424  chemotaxis sensory transducer  47.53 
 
 
558 aa  289  1e-76  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.574813 
 
 
-
 
NC_011757  Mchl_3733  methyl-accepting chemotaxis sensory transducer  47.53 
 
 
558 aa  288  2e-76  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.152196  normal 
 
 
-
 
NC_007643  Rru_A3563  chemotaxis sensory transducer  46.63 
 
 
563 aa  287  4e-76  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  46.79 
 
 
562 aa  287  4e-76  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  34.06 
 
 
688 aa  287  4e-76  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  49.71 
 
 
561 aa  286  7e-76  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  42.3 
 
 
565 aa  286  1.0000000000000001e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  42.96 
 
 
689 aa  285  3.0000000000000004e-75  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_007925  RPC_4104  methyl-accepting chemotaxis sensory transducer  45.55 
 
 
586 aa  284  5.000000000000001e-75  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.783692  normal 
 
 
-
 
NC_011004  Rpal_5144  methyl-accepting chemotaxis sensory transducer  40.74 
 
 
686 aa  283  6.000000000000001e-75  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  47.31 
 
 
562 aa  283  7.000000000000001e-75  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  44.68 
 
 
567 aa  283  9e-75  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  47.31 
 
 
562 aa  281  3e-74  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  43.08 
 
 
563 aa  280  4e-74  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  46.47 
 
 
655 aa  280  5e-74  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  46.7 
 
 
561 aa  280  8e-74  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  45.92 
 
 
561 aa  280  8e-74  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_007643  Rru_A2076  chemotaxis sensory transducer  46.58 
 
 
561 aa  279  1e-73  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.723039  n/a   
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  42.16 
 
 
572 aa  279  1e-73  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  45.05 
 
 
567 aa  279  1e-73  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  46.43 
 
 
561 aa  278  2e-73  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_009485  BBta_7375  methyl-accepting chemotaxis sensory transducer  44.99 
 
 
655 aa  276  8e-73  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  38.98 
 
 
667 aa  276  8e-73  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  44.19 
 
 
565 aa  276  9e-73  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1316  methyl-accepting chemotaxis sensory transducer  45.31 
 
 
561 aa  276  1.0000000000000001e-72  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.234166 
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  45.58 
 
 
560 aa  276  1.0000000000000001e-72  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_010511  M446_0370  methyl-accepting chemotaxis sensory transducer  48.13 
 
 
560 aa  275  2.0000000000000002e-72  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.52335 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  44.73 
 
 
568 aa  275  2.0000000000000002e-72  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_007643  Rru_A0718  chemotaxis sensory transducer  34.14 
 
 
669 aa  274  4.0000000000000004e-72  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.845917  n/a   
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  44.69 
 
 
561 aa  274  4.0000000000000004e-72  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  43.05 
 
 
656 aa  274  4.0000000000000004e-72  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_007406  Nwi_2996  methyl-accepting chemotaxis protein  44.13 
 
 
698 aa  273  6e-72  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_2032  methyl-accepting chemotaxis sensory transducer  45.87 
 
 
558 aa  273  7e-72  Methylobacterium populi BJ001  Bacteria  normal  normal  0.176129 
 
 
-
 
NC_007958  RPD_1025  methyl-accepting chemotaxis sensory transducer  38.52 
 
 
681 aa  273  8.000000000000001e-72  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  46.68 
 
 
561 aa  272  2e-71  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  45.38 
 
 
694 aa  272  2e-71  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2346  methyl-accepting chemotaxis sensory transducer  42.75 
 
 
556 aa  271  2.9999999999999997e-71  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.395485 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  41.41 
 
 
656 aa  271  4e-71  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  47.43 
 
 
561 aa  270  8e-71  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4549  methyl-accepting chemotaxis sensory transducer  48.56 
 
 
561 aa  270  8e-71  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2072  chemotaxis sensory transducer  42.49 
 
 
556 aa  270  8e-71  Methylobacterium extorquens PA1  Bacteria  normal  0.68132  normal  0.341201 
 
 
-
 
NC_009485  BBta_1388  methyl-accepting chemotaxis sensory transducer  44.57 
 
 
656 aa  269  1e-70  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0527529  normal  0.207734 
 
 
-
 
NC_007778  RPB_1977  methyl-accepting chemotaxis sensory transducer  42.75 
 
 
651 aa  269  1e-70  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.064764  normal 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  44.32 
 
 
562 aa  269  1e-70  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_007925  RPC_4105  methyl-accepting chemotaxis sensory transducer  46.59 
 
 
561 aa  269  1e-70  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.916882  normal 
 
 
-
 
NC_007643  Rru_A2078  chemotaxis sensory transducer  46.97 
 
 
561 aa  268  2e-70  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.960991  n/a   
 
 
-
 
NC_010172  Mext_2555  chemotaxis sensory transducer  47.03 
 
 
561 aa  268  2e-70  Methylobacterium extorquens PA1  Bacteria  normal  0.834906  normal 
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  44.96 
 
 
698 aa  268  2.9999999999999995e-70  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  42 
 
 
691 aa  268  2.9999999999999995e-70  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  45.2 
 
 
674 aa  268  2.9999999999999995e-70  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  43.56 
 
 
568 aa  267  4e-70  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_007925  RPC_1253  methyl-accepting chemotaxis sensory transducer  47.38 
 
 
567 aa  267  5e-70  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.010155 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  41.04 
 
 
675 aa  265  1e-69  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  44.5 
 
 
563 aa  266  1e-69  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  45.27 
 
 
681 aa  265  2e-69  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010517  Mrad2831_6434  methyl-accepting chemotaxis sensory transducer  45.48 
 
 
557 aa  265  2e-69  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  43.7 
 
 
542 aa  265  2e-69  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  45.58 
 
 
608 aa  265  2e-69  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  43.49 
 
 
587 aa  265  2e-69  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  44.21 
 
 
602 aa  265  2e-69  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  42.19 
 
 
672 aa  265  3e-69  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  41.69 
 
 
674 aa  265  3e-69  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  43.13 
 
 
676 aa  264  4e-69  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  43.24 
 
 
670 aa  264  4e-69  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3476  methyl-accepting chemotaxis sensory transducer  44.32 
 
 
641 aa  264  4.999999999999999e-69  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.640734  normal 
 
 
-
 
NC_010511  M446_2738  methyl-accepting chemotaxis sensory transducer  45.01 
 
 
562 aa  263  8.999999999999999e-69  Methylobacterium sp. 4-46  Bacteria  normal  0.809654  normal  0.020868 
 
 
-
 
NC_011004  Rpal_4788  methyl-accepting chemotaxis sensory transducer  47.89 
 
 
561 aa  262  1e-68  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  42.62 
 
 
714 aa  262  1e-68  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  43.99 
 
 
561 aa  262  2e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_007958  RPD_3581  methyl-accepting chemotaxis sensory transducer  41.96 
 
 
567 aa  261  2e-68  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0981346  normal  0.985512 
 
 
-
 
NC_011757  Mchl_0679  methyl-accepting chemotaxis sensory transducer  42.71 
 
 
565 aa  261  2e-68  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0248904 
 
 
-
 
NC_010725  Mpop_0223  methyl-accepting chemotaxis sensory transducer  46.72 
 
 
565 aa  262  2e-68  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2778  methyl-accepting chemotaxis sensory transducer  46.76 
 
 
558 aa  261  3e-68  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.060825  normal 
 
 
-
 
NC_007925  RPC_3475  methyl-accepting chemotaxis sensory transducer  42.78 
 
 
649 aa  261  3e-68  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2363  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
695 aa  260  5.0000000000000005e-68  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2903  methyl-accepting chemotaxis sensory transducer  38.1 
 
 
568 aa  260  6e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335645  normal  0.0996392 
 
 
-
 
NC_010511  M446_2708  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
696 aa  260  6e-68  Methylobacterium sp. 4-46  Bacteria  normal  0.674681  normal  0.192785 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  41.75 
 
 
691 aa  260  6e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  44.48 
 
 
552 aa  260  7e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  42.74 
 
 
565 aa  259  8e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0619  methyl-accepting chemotaxis sensory transducer  46.13 
 
 
561 aa  259  8e-68  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0130228 
 
 
-
 
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