| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1317 |
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| Symbol | |
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| ID | 3907825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1501512 |
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| End bp | 1503194 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637883211 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_484938 |
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| Protein GI | 86748442 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.14669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACTTCA GCAATCTTCG CATCACGCCG AAATTGAGCA TTCTCGTCGC TGTGGCGATG
CTCGGCCTGA TTGCCGCCGG TGTGTTCGCC GCATCCATTC TGCATCGCGA GATGCGTGCC
GGTCGCTTCG AGCAGACCAA GGCGATGGTC GAGACCGCGC TGAACATGGC GATCGGGCTG
CAGAAGCAGG TCGATGCCGG CAAGCTGACC AAGGATCAGG CGATCTCCGA CTTCCAGCAG
CGCGCCCAGG CGATGACCTA TGACGGCGCC AACGGCTATT TCTTCGCCTA CAAGATGGAC
GGAGAGGTCG TGCTGCTGCC GGGGGTGAAG CCCGGCACGA ACCGGCTCGA CGTCGAGACG
GCCGGCCGCA AGATCGTCCG CGAATTGCGT GATGGCGTCG CCGCCAAGGG CAACGTCACG
CTGTTCTACG AATTCAAGAA GCCGGGCGGC GACGAACTGC TCAGCAAGGT ATCGTATGCG
GCCGCGATCC CCGGCTGGAA CGTCTTCGTC GGCACCGGCG TCTATCTGCA GGACATCGAC
GCCAAGCTGA AGCCGATCAT GATGTGGCTC GGGCTCGCCA TTCTCGGCAT CGGCGCCGTC
TGCTCGCTGG TCGCCTGGCT GATCAGCCGC AGCATCACCA AGCCGCTCGG CCGTCTCGGT
GCACGGATGA AGTCGCTCGC CGGCGGCCAG ATCGATGCGC CGATCCCGGG TGTCGACCGC
GGCGACGAGG TCGGCGAGAT GGCGAAGACG GTGCAGGTGT TCCAGGACAA TGCCATCCGC
ATCCGCGGCC TCGAGCAGCA GGAGCAGGAA GCGCAGCAGC GCGCGGGCGC CGAGCGGCGG
GCGCTGATGG AGAACATCGC CGACGATTTC GAGCGCAGCG TCAACGGCGT GGTGCGCAGC
GTGGCCGATG CGACCAAGGA AATGCAGGCG ACCGCACAAT CGATGACCGC GACCGCCTCG
GATGCGAGTT TGCGCGCCGG GGCTGTCGGT GCCGCGTCGG AAGCGTCCGC CGGGATGGTC
GGCACCGTCG CCTCGGCGTC CGAACAACTA TCCGCGTCGG TCCATGAGAT TTCCCGGCAG
GTGCAGCAGT CGCGCGAGAT CGCCGGCAAG GCCGTCAGCG ACGCCGAGCA CACCAACGAG
ACGGTGATGC AGCTCTCGGT CAGCGCCGAG AAGATCGGCG AAGTGGTGCA ACTGATCCAT
TCGATCGCGT CGCAGACCAA CCTGCTGGCG CTGAACGCCA CCATCGAGGC GGCGCGCGCC
GGCGAATCCG GCCGCGGCTT CGCGGTGGTC GCCTCCGAAG TGAAGGCGCT GGCGGGCCAG
ACCGCGAAGG CGACCGAGGA GATTTCGGCG CAGGTGTCGG CGATGCAGGC GTCGACCGCG
AACGCGGTGG ATTCGATCAG TGGAATCACC TCCACCATCG GGCAGATGAG CGAGATCACC
ATGGCGATCT CCAGCGCCGT CGAGCAGCAG GGCGCGGCGA CGCGCGACAT CGCCCGCAAT
ATCCAGTCGG TTGCGGCCGG GTCGAGCGAG ATCAGCGGCC ATATCAGCGG CGTCAGCGAC
GCGGCGGCCG CGACCGGCGA AGCCGCGGCG CAGGTGCTCG CGCATGCGGG CGAACTGGAC
GGCCAGTCCG ATGCGCTGCA ATCGGCGGTC GATGACTTCC TGCAGAAGGT CCGCGCCGCC
TGA
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| Protein sequence | MHFSNLRITP KLSILVAVAM LGLIAAGVFA ASILHREMRA GRFEQTKAMV ETALNMAIGL
QKQVDAGKLT KDQAISDFQQ RAQAMTYDGA NGYFFAYKMD GEVVLLPGVK PGTNRLDVET
AGRKIVRELR DGVAAKGNVT LFYEFKKPGG DELLSKVSYA AAIPGWNVFV GTGVYLQDID
AKLKPIMMWL GLAILGIGAV CSLVAWLISR SITKPLGRLG ARMKSLAGGQ IDAPIPGVDR
GDEVGEMAKT VQVFQDNAIR IRGLEQQEQE AQQRAGAERR ALMENIADDF ERSVNGVVRS
VADATKEMQA TAQSMTATAS DASLRAGAVG AASEASAGMV GTVASASEQL SASVHEISRQ
VQQSREIAGK AVSDAEHTNE TVMQLSVSAE KIGEVVQLIH SIASQTNLLA LNATIEAARA
GESGRGFAVV ASEVKALAGQ TAKATEEISA QVSAMQASTA NAVDSISGIT STIGQMSEIT
MAISSAVEQQ GAATRDIARN IQSVAAGSSE ISGHISGVSD AAAATGEAAA QVLAHAGELD
GQSDALQSAV DDFLQKVRAA
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