Gene Rru_A0568 details

Gene Information

• Locus tag: Rru_A0568
• ID: 3834246
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 674130
• End bp: 676118
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637824652
• Product: chemotaxis sensory transducer
• Protein accession: YP_425659
• Protein GI: 83591907
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCAAGA ACATTTCGAT CAAGGTTCGT CTATACGCCG GTTTTTTTCT CGTCCTGGCC 
CTGATGGGGG GCGTCGGACT GGTGTCTTAT TCAATCTTCA CCAGTTCGAA CGACAAATTC 
GACGAGTTCT CCGAAGCATC GGAAGTGGCG CTCTCGGCCC TTCAATTGAA CCGCTTGGTT 
CAATCCTTCG ACACCGACGT ATCGAAATAT CTCGATACGG CCTCGTCCGA GGCCGCGGCG 
CGCTTGCACC AGGATCAGAT CACCGTCCAG CAAGCCATCT CGGCCTTTGG CGCCCTCGTT 
GCCGGCACGC CCCAGCAGGA GGCGGCCGAA CGCATCGCCG AGGCGTATCG CAAACATGAA 
GACGCCCTGA AGCCGGCGAT CGGACTGGTC GGCCAGCGCG TCGATCTAAT CTCGACCTCG 
CTGCTGCCCG CCGCCGAAGG TCTGGTGGAG TGGGCCGTCG ATGTCCGCGA CAAGGCCTTC 
GAGGCCGGCG ACGCCCCCAC CGCCCAACAT GCGTCCAAGG TCATCGAGAA CATGTTGCGC 
GCCCGGGTGG CGGCCGACGG CTATCTGTCG GACGGCTCGG AAGAGCAGTT CAACGCCATC 
TGGGAAGCGC TGTTCGCCGT CACCGAAAAC CTTGATGGCA TCCCCACCGC CGCCCAGGTC 
CAGGACCTTT ATGGGCAGTA CGAGGAGGCG CTGAATACCC TTTCGGGGAT TCTGGGCGAA 
ATCACCACGA TGGAAACCGC CCTGCGCGAC GCCGGGGCGG CGATCACCCG CGAGGGCGAG 
AACGTCAAGG ACGCGGCGCT GGCCCGCCAG CAGATCATCC GCGACGCCAC CCGCAGCCAG 
CTTGGCAACG CCAGTTCGCT GGTCGTCTGG TCCAATCTGG TGATCTTGCT GCTTGGTCTG 
GCCCTGGCCG GCTTTATCGG CCGCGGCATC AGCAAGCCGC TGGGCGCAAT GACCGCCGCC 
CTCAAGAAGC TTTCCGAGGG GGATAGCGAG ACCACCATCC CCGGCCTTGG CCGGGGCGAC 
GAATTGGGCG CCATGGCCCA TGCCGCCCAG GTGTTCAAGG AATACAACCA CAAGATGGAG 
GCCCTGCGCC GCGATCAGGT CGAGGCGCAG AAACAGGCCG AGGCCGACCG CCATAGCGCC 
ATCCGCAAGC TGGCCGACGA CCTGGAAAAC ACCGTCTCGG GCGTCATCGG CGTCATCGGC 
GCCTCGGCCG GCCAGATGGA AGCCTCGGCC CGCTCGATGT CGGTCACCGC CGAGGATACG 
GCGCGACGGG CCGGTGACGT GTCGACCATC ACCGATTCCG CCACCCACGA TGTCGAGGAG 
GTCGCCGCCA GCGCCGAGGA GCTCAACGCC TCGATCAGCG AGATCAGCCG ACAGGTCCAC 
CATTCCTCGA CGATTTCGCG CGATGCCGTC GAGCGAGCGT CGAAGGCCAG CCATCGGGTC 
TCCGACCTCA AGGACGCCGC CGAGCGCATC GGCGAGGTGG TGGCCCTGAT CACCGATATC 
GCCGATCAGA CCAACCTTCT GGCGCTCAAC GCCACCATCG AAGCCGCCCG CGCCGGCGAT 
GCCGGCAAGG GCTTCGCCGT GGTCGCCAAT GAGGTCAAAA GCCTTGCCAA CCAGACCTCG 
CGGGCGACCG ACGAGATCGG CAAGCAGATC GGCGCCGTCC AGCTCGCCAC CAACGAAGCG 
GTGGCGGCGA TTTCGGGGAT CGTCACGGTG ATCGGCGAAA TGGATCAGGT CTCGGCCGCC 
GTCGCCGCCG CCATCGAGGA ACAGGACGCC GCGACCCGGA CCATCGCCCA AAGCACCCAG 
CGCGCCGCGT CGGGCACCCA GCAGGCCAGC TCGACCATGG GCAATGTCAC CCAGGCCGCC 
GCCAATACGG GCACCGCGGC GACGGAAGTG CTGGCCGCCG CCGGCGAGCT GACTCGTCAG 
GCCAGCGAAC TGCGCACCCA GGTCGCCCGC TTCCTCGCCC ATATCCGCAA GGGCGGCGAA 
TCGGCGTAA 

 

Protein sequence

MLKNISIKVR LYAGFFLVLA LMGGVGLVSY SIFTSSNDKF DEFSEASEVA LSALQLNRLV 
QSFDTDVSKY LDTASSEAAA RLHQDQITVQ QAISAFGALV AGTPQQEAAE RIAEAYRKHE 
DALKPAIGLV GQRVDLISTS LLPAAEGLVE WAVDVRDKAF EAGDAPTAQH ASKVIENMLR 
ARVAADGYLS DGSEEQFNAI WEALFAVTEN LDGIPTAAQV QDLYGQYEEA LNTLSGILGE 
ITTMETALRD AGAAITREGE NVKDAALARQ QIIRDATRSQ LGNASSLVVW SNLVILLLGL 
ALAGFIGRGI SKPLGAMTAA LKKLSEGDSE TTIPGLGRGD ELGAMAHAAQ VFKEYNHKME 
ALRRDQVEAQ KQAEADRHSA IRKLADDLEN TVSGVIGVIG ASAGQMEASA RSMSVTAEDT 
ARRAGDVSTI TDSATHDVEE VAASAEELNA SISEISRQVH HSSTISRDAV ERASKASHRV 
SDLKDAAERI GEVVALITDI ADQTNLLALN ATIEAARAGD AGKGFAVVAN EVKSLANQTS 
RATDEIGKQI GAVQLATNEA VAAISGIVTV IGEMDQVSAA VAAAIEEQDA ATRTIAQSTQ 
RAASGTQQAS STMGNVTQAA ANTGTAATEV LAAAGELTRQ ASELRTQVAR FLAHIRKGGE 
SA