| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4105 |
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| Symbol | |
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| ID | 3973155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4565300 |
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| End bp | 4566985 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927209 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_533950 |
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| Protein GI | 90425580 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.916882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCTGA ACAATCTGAC CATCACGCCC AAGCTCGGCA TTCTCGTCGG CGTCACCTTG
CTCGGCCTTT GCGCCGCCGG ATTGCTGGCC GGCAAGCTGA TGCAACGCGA AATGCTCAAC
GCCCGGGTCG ACCAGATCAA GGCGATCGTC GAAACCGCGC GCAACATCGC CGTCGGCCTG
CAGAAGGAGG TCGACGCCGG CAAGATCACC AAGGAAGCCG CGATCGCCGA ATTCGGGCGG
ATCGGCAACA TGATGCGCTT CGACAACGGC TCAGGCTATT TGTTCGGCTC CACCATGCAA
GGCGTGACGA TCCTGTCGCC CAATCCGGAG CAGATCGGCA AGAACCGTAT CGAGTCGAGC
ACCAATGGCC GGTATCTGAC CCGCGAATGG ATCGCCGGCG TCCCCGCCAC CGGCGAACAC
TTGTTGACCT ATGAATTCAT GAAGCCTGGC GAGAAGCAGC CGATCCGCAA GATCGGCTAC
GCCACCGCCA TCCCCGGCTG GAACATGTAT GTCGGCACCG GCGGCTATCT GGATGATCTC
GACGCCAAGC TGATGCCGAT CATGTGGGCG CTCGGCTTGG CTATCCTGGC GATCGGCGCG
GCCGCCGGGG CGATCGCCTG GATGATCGGC CGTAGCATCA CCCGACCGCT CGGCCGGCTC
GGCGCACGGA TGCGCTCGCT GGCCGATGGC CACCTGGACG AGACGATTCC CGGCGCCGAG
CGCGGCGACG AGGTCGGCGC GATGGCCAAG ACGGTGCAGG TGTTCAAGGA CAATGCGATC
CGGATTCGCG GGCTGGAGCA GCTCGAGGTC GAGACGCAGC AGCGCGTGGC CGGCGAGCGC
CGCGCCGCGA TGGAAAGCAT CGCCGATGAT TTCGAGCGCA GCGTCTCGGG CATCGTGCGG
TCGGTGTCCT CGGCGGCGTC GGGCATGCAG ACCACCGCGC AATCGATGAC CGCGACCGCC
AGCGACGCAT CGTCGCGCGC CGCCTCGGTC GGAGCCGCCT CGCAGACCGC GTCGAACACC
GTCGGCATGG TGGCGGCGGC GGCGGAGCAG CTGTCCGGTT CGGTGGCGGA GATTTCCCGG
CAGGTGACGC AATCGCGCGA GATCGCCGGC CGCGCCGTCG GTGACGCAGA ACACACCAAC
GAGACGGTGA AACTGCTGTC GATCGGCGCC GAGAAGATCG GCGAAGTGGT GCAGCTCATC
CACTCGATCG CCTCGCAGAC CAATCTGTTG GCGCTGAATG CCACCATCGA AGCGGCGCGC
GCCGGCGAAT CCGGCCGCGG CTTCGCGGTG GTGGCCTCCG AGGTCAAGGC GTTGGCGAGC
CAGACCGCCA AGGCGACCGA GGAGATCTCC GCGCAGGTCG CCGCGATGCA GGCCTCGACC
GCGACCGCGG TGGAGTCGAT CGCCGGCATC ACCGCGACCA TCGGCCAGAT GAGCGACATC
ACCATGGCGA TTTCCGGGGC CGTAGAGCAG CAGGGCTCGG CGACCCGCGA GATCGCCCGC
AACATCCAGG CGGTCGCCGC CGGCTCCAAC GAGATTTCCG ATCACATCGG CGGCGTCGCC
GCCGCCGCGG AAGCCTCCGG CACGGCGGCC TCCGAAGTGT TGTCGAACGC CCGCGAACTC
GACAGCCAGT CCGGCTCGCT GCGCGCCGCG GTCGACGAAT TCCTCGGCAA GGTCCGCGCG
GCGTAA
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| Protein sequence | MKLNNLTITP KLGILVGVTL LGLCAAGLLA GKLMQREMLN ARVDQIKAIV ETARNIAVGL
QKEVDAGKIT KEAAIAEFGR IGNMMRFDNG SGYLFGSTMQ GVTILSPNPE QIGKNRIESS
TNGRYLTREW IAGVPATGEH LLTYEFMKPG EKQPIRKIGY ATAIPGWNMY VGTGGYLDDL
DAKLMPIMWA LGLAILAIGA AAGAIAWMIG RSITRPLGRL GARMRSLADG HLDETIPGAE
RGDEVGAMAK TVQVFKDNAI RIRGLEQLEV ETQQRVAGER RAAMESIADD FERSVSGIVR
SVSSAASGMQ TTAQSMTATA SDASSRAASV GAASQTASNT VGMVAAAAEQ LSGSVAEISR
QVTQSREIAG RAVGDAEHTN ETVKLLSIGA EKIGEVVQLI HSIASQTNLL ALNATIEAAR
AGESGRGFAV VASEVKALAS QTAKATEEIS AQVAAMQAST ATAVESIAGI TATIGQMSDI
TMAISGAVEQ QGSATREIAR NIQAVAAGSN EISDHIGGVA AAAEASGTAA SEVLSNAREL
DSQSGSLRAA VDEFLGKVRA A
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