Gene Mext_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0820 
Symbol 
ID5833695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp892491 
End bp894317 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content68% 
IMG OID641366602 
Productchemotaxis sensory transducer 
Protein accessionYP_001638296 
Protein GI163850253 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.254614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.216431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGATG CACATCGATC GCGGCCAGAC GGCAACTTGT GTAAATTCGG ACAGGGACTA 
CAATTTTTAG CTTTTGTTAA TAGCCAAAAA TCTACTTTCG TCGCTGTCCT GCGGCAAGAA
TCGGACCGTG GGGCATCGAG GAATCTAGCC GTGCTGCGTT TCGATATCCC GAGGAAGCTC
TACACGCTCG TTGGCCTGTC GGCGCTGAGC CTCCTGGCGA TCTGTACCGT CGCGCTGACC
TACCAGTACA ACGCGATGTA CGCGCAGCGC CTCAGCCAGC TCGAGCTGAT GACGGAATCG
GCCATCAACC TGGTCGACCA CCATTACCGG TTCGCCCAGA AGGGGGAGAT GCCGGAGGCG
ACGGCCCGTG CGGCCGCCTA TGCCGGCGTC ACGGCGATGC GGCACGGTGC GGACGGCTAC
TTCTTCATCT GGGACCGCGA CGTGACCGTG GTCGCACACG CGGACAAGAG CCTGCTCGGC
CGCAACTTCA GCAATCTCAA GGACACAACG GGCTTCGCCT TCGTCGCGGA CGTGCTGCCA
CGGGCCGTGC GGGATGGGGT GGCATCGGTC GTCTACACCT GGAAGCGCAC ACCGGATTCT
GCGGCGACGG CGAAGGTCGC CACGTTTCGC TACCATGCGC CCTGGGGGCT GTATGTCGCC
ACCGGCGTCC ATATCGACGA TCTGAAGGCG ACGCTGTGGG AGCAGATCCT GCGCCTCGGC
GCGATCGCGC TCGGCATTCT CCTCCTCCTC GGCGCCGCCT CCTGGGCGAT CATCCGCTCG
ATCGTGCGCC CGATGAATGC CCTACGGGCG ACGATGGGCC GGCTCGCGCA GGGACGCACC
GACATCGCCC TGCCGGAGGC CGAGCGCAGC GACGAAGTCG GCGCGATGGC CCGCGCCGTG
GCGGTCTTCC GCGACAACGC CATCGAGCGC GAACGACTGC AAGGGGCGCA GGATGCCGAC
CAGGCGCTGA AGATGGAGCG GGCCGAGCGG CTCAACACCC TGATTCAGGG ATTCGAGGGT
ACGATCACCG GCATCGTCAG CACCATCGGC GGGGCCGCCT CGCAACTGCA ATCGACGGCC
CAGGGCCTCG CCGGTACGGC GAACCAGACC GCCGGGCAAT CGACCGCCGT CGCCGCGGCC
GCCGAGGAGG CAACCACGAA CGTCAACACC GTGGCTGCCG CCGCCGAGGA ACTAGGCAGC
TCCGTCCAGG AGATCGGCCG GCAGGTGGAC GGGTCGGCCG CCCTCTCCCG CACGGCGGTG
GCGGAGGCCG GCCAGACCGG ACAGCTCGTC CAGGATTTGA GCGAAGCCGC CGCCCGCATC
GGCGATGTCG TGGCGATGAT CTCGGACATC GCCGGCCAGA CCAATCTGCT GGCCCTCAAC
GCGACGATCG AGGCGGCACG CGCGGGCGAA GCGGGCCGTG GCTTCGCCGT GGTGGCGGCG
GAGGTGAAGG AGTTGGCGAG CCAGACCGCG CGGGCGACGA CGGACATCTC GGAGCAGATC
GCCCGCATCC AGCGCTCGAC CGGTACGGCC GTCACCGCGA TCGGCGACAT CACCGGGCGG
ATCCAAGAGA TCAGCAGCGT CTCCACCTCG ATCGCGGCGG CAGTCGAGGA GCAGAGCGCG
GCGACCCAGG AGATCGTCCG CAACGTGGCC CAGGCCGCGA CCGGCACCAG CGAGGTGACG
CACAACATCT CCGGTGTCGC CCGCGCCTCG GAGGAGACCG GGACGGCCGC CGCACAGGTG
CTCGGTGCCG CCTCGGAGCT GTCTCAGCAA TCCGATCACC TGCGGGCCGA AGTGCGACGC
TTTCTGGCCA CGGTGCGCGC GGCCTGA
 
Protein sequence
MLDAHRSRPD GNLCKFGQGL QFLAFVNSQK STFVAVLRQE SDRGASRNLA VLRFDIPRKL 
YTLVGLSALS LLAICTVALT YQYNAMYAQR LSQLELMTES AINLVDHHYR FAQKGEMPEA
TARAAAYAGV TAMRHGADGY FFIWDRDVTV VAHADKSLLG RNFSNLKDTT GFAFVADVLP
RAVRDGVASV VYTWKRTPDS AATAKVATFR YHAPWGLYVA TGVHIDDLKA TLWEQILRLG
AIALGILLLL GAASWAIIRS IVRPMNALRA TMGRLAQGRT DIALPEAERS DEVGAMARAV
AVFRDNAIER ERLQGAQDAD QALKMERAER LNTLIQGFEG TITGIVSTIG GAASQLQSTA
QGLAGTANQT AGQSTAVAAA AEEATTNVNT VAAAAEELGS SVQEIGRQVD GSAALSRTAV
AEAGQTGQLV QDLSEAAARI GDVVAMISDI AGQTNLLALN ATIEAARAGE AGRGFAVVAA
EVKELASQTA RATTDISEQI ARIQRSTGTA VTAIGDITGR IQEISSVSTS IAAAVEEQSA
ATQEIVRNVA QAATGTSEVT HNISGVARAS EETGTAAAQV LGAASELSQQ SDHLRAEVRR
FLATVRAA