| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2555 |
|---|
| Symbol | |
|---|
| ID | 5832407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2865356 |
|---|
| End bp | 2867041 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641368356 |
|---|
| Product | chemotaxis sensory transducer |
|---|
| Protein accession | YP_001640020 |
|---|
| Protein GI | 163851977 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.834906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAA TTTCACTCAG CGTTCGAGCA TCCCTGGGAT GCCTCTTTGC AGCGATGCTC
GTCGTGTCGA TCCTGCAGGG TGCTGCCGCC TATTGGAAGA TCAACAGCAT CTCTACTGTC
ACGAATGATA TTCTCGAGAA TACTATTCCC TCCATCAACG AAGCACATGC AATCAACGCG
CTCATTCTGC GCACGCGCCT TTGGCAGGCT CGCTACATGA CGCCCGAGAA TGAGGCGTCG
AGAGAGCAGA GCAGAGCCAG AATTGTCGAG TTCGCCACAG AACGCGACCA AAGGGTTGCG
GCATACCAAT CGCTCGTCGC GAGCGCGGAC GAGCAGCAGA CGTATGACGA GTTGAAGGCG
AAGCTTGATC TGCTGAGAGC CGATGGCGAA CGCCTTCGGG CTTTCCCGAA TGAGCGCTAC
GACGAGGCCA TCGCGTTCTT CCGCGGCTCG ATGTACGCCA ACTACCTCGC CGTCTCGGCC
GCAGCCCGCA AGCTCGTCGA TATCAATATT GCGAATGGCA AGAAGGCCGA TGCCGCCGTC
CGGTCGGAAC AGGCTTCGGC GATGCGGAGC ACGCTGCTGA TCCTCGGCCT TGCCGTCCTG
ATCGCCCTGA GCGCGATGAC CTTCTGCTTC CTGGGCGTCT CGCGTCCGAT CGAGCGGATG
ACCGCGGCGA TGCGGCGCCT GGCCGGCGGG GACGCAGCCT CGGAGATTCC CTATGCCAGC
CGCCAGGACG AGATCGGTGC GATGGCCGGC GCCGTGCAGG TGTTCCGCGA CAATCTCGTT
CGGACCCGCC AGCTCGAAGA GGAGACGGCG CTCGCGCGTG CCTCGGCTGA AGAGCAGCGC
AAGGCCGGCA TGCGGCAGAT GGCCGATGGC TTCGAGGCCG CGGTCGGCGG CATCGTCGGC
ATGGTTTCCT CGGCCGCCAG CGAGTTGCAG GCCACGGCCC AGAGCATGAG TTCCACCGCC
GGACAGACCG CCACCCAATC CACCAGCGTG GCGGCGGCCG CCGAGCAGGC TGCGGCCAAC
GTCAACACCG TGGCGGCGGC GGCCGAAGAA CTCGGCTCGT CGGTGGCCGA GATCAGCCGG
CAGGTTTCCG GCTCGGCCGA CCTCGCCCAA ATGGCGGTGG CGGAGGCCAA TGCCACGGCG
GGCCTCGTGC AGGAGCTGGC GCAATCGGCC AGCCGTATCG GCGACGTGGT GGCTCTGATC
TCGCAGATCG CGGGGCAGAC GAACCTCTTG GCGCTCAACG CCACGATCGA GGCGGCCCGT
GCCGGCGAGG CGGGGCGAGG CTTCGCGGTC GTGGCCGCCG AGGTCAAGGA ACTCGCCAAC
CAGACTGCGC GCGCCACCGA GGAGATCGGG CGGCAGATCG GCCAGATCCA GGGATCGACG
GATCAGGCGG TCGGCGCGAT CGGCGGGATC GGCACGCGCA TCCGCGAAAT CGCGGGCGTC
GCGGCCTCGA TCGCGACGGC GGTGGAGGAG CAGGGCGCGG CGACCCAGGA GATCGTCCGC
AACGTTGCCC AGGCGTCCAC CGGGACGAGC GAAGTGACGA CGAACATCGC GGGCGTGGCG
GGTGCGGCCG AGGAGACGGG TGCAGCCGCC GCGCAGGTGC TGGCCTCGGC CTCCGAGCTG
TCGCGCCAGT CCGAGCACCT CAACGCCGAG GTCGGGAACT TCCTCGCCAC CGTGCGCGCC
GCCTGA
|
|---|
| Protein sequence | MPKISLSVRA SLGCLFAAML VVSILQGAAA YWKINSISTV TNDILENTIP SINEAHAINA
LILRTRLWQA RYMTPENEAS REQSRARIVE FATERDQRVA AYQSLVASAD EQQTYDELKA
KLDLLRADGE RLRAFPNERY DEAIAFFRGS MYANYLAVSA AARKLVDINI ANGKKADAAV
RSEQASAMRS TLLILGLAVL IALSAMTFCF LGVSRPIERM TAAMRRLAGG DAASEIPYAS
RQDEIGAMAG AVQVFRDNLV RTRQLEEETA LARASAEEQR KAGMRQMADG FEAAVGGIVG
MVSSAASELQ ATAQSMSSTA GQTATQSTSV AAAAEQAAAN VNTVAAAAEE LGSSVAEISR
QVSGSADLAQ MAVAEANATA GLVQELAQSA SRIGDVVALI SQIAGQTNLL ALNATIEAAR
AGEAGRGFAV VAAEVKELAN QTARATEEIG RQIGQIQGST DQAVGAIGGI GTRIREIAGV
AASIATAVEE QGAATQEIVR NVAQASTGTS EVTTNIAGVA GAAEETGAAA AQVLASASEL
SRQSEHLNAE VGNFLATVRA A
|
|---|
| |