More than 300 homologs were found in PanDaTox collection
for query gene Shew_3639 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004347  SO_4635  methyl-accepting chemotaxis protein  59.81 
 
 
658 aa  685    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_4208  methyl-accepting chemotaxis sensory transducer  61.51 
 
 
660 aa  720    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_4019  methyl-accepting chemotaxis sensory transducer  61.36 
 
 
658 aa  701    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_4340  methyl-accepting chemotaxis sensory transducer  61.51 
 
 
660 aa  723    Shewanella baltica OS195  Bacteria  normal  0.751262  normal  0.782794 
 
 
-
 
NC_009092  Shew_3639  methyl-accepting chemotaxis sensory transducer  100 
 
 
652 aa  1297    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3848  methyl-accepting chemotaxis sensory transducer  59.75 
 
 
660 aa  690    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3813  methyl-accepting chemotaxis sensory transducer  60.9 
 
 
658 aa  696    Shewanella sp. MR-4  Bacteria  normal  normal  0.0320682 
 
 
-
 
NC_008322  Shewmr7_3904  methyl-accepting chemotaxis sensory transducer  61.21 
 
 
658 aa  700    Shewanella sp. MR-7  Bacteria  normal  0.202773  normal  0.313356 
 
 
-
 
NC_009901  Spea_4019  methyl-accepting chemotaxis sensory transducer  57.23 
 
 
646 aa  659    Shewanella pealeana ATCC 700345  Bacteria  normal  0.723587  n/a   
 
 
-
 
NC_010506  Swoo_0148  methyl-accepting chemotaxis sensory transducer  60.06 
 
 
651 aa  707    Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_4136  methyl-accepting chemotaxis sensory transducer  61.36 
 
 
660 aa  719    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3540  chemotaxis sensory transducer  49.61 
 
 
668 aa  563  1.0000000000000001e-159  Shewanella denitrificans OS217  Bacteria  normal  0.502982  n/a   
 
 
-
 
NC_008345  Sfri_0216  methyl-accepting chemotaxis sensory transducer  52.7 
 
 
648 aa  549  1e-155  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3512  putative methyl-accepting chemotaxis sensory transducer  48.67 
 
 
647 aa  513  1e-144  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_0139  methyl-accepting chemotaxis protein  31.2 
 
 
650 aa  213  1e-53  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4309  methyl-accepting chemotaxis sensory transducer  28.76 
 
 
628 aa  181  2.9999999999999997e-44  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00619864  normal 
 
 
-
 
NC_009439  Pmen_0717  methyl-accepting chemotaxis sensory transducer  29.42 
 
 
654 aa  147  6e-34  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5564  putative chemotaxis transducer  29.1 
 
 
657 aa  139  2e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0622  chemotaxis sensory transducer  28.67 
 
 
648 aa  136  9e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  33.57 
 
 
620 aa  135  1.9999999999999998e-30  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  32.3 
 
 
545 aa  135  3e-30  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  32.11 
 
 
695 aa  132  2.0000000000000002e-29  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_008463  PA14_64060  putative chemotaxis transducer  29.17 
 
 
657 aa  130  9.000000000000001e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  32.18 
 
 
545 aa  130  1.0000000000000001e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
620 aa  128  3e-28  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_010322  PputGB1_0607  methyl-accepting chemotaxis sensory transducer  29.05 
 
 
653 aa  127  5e-28  Pseudomonas putida GB-1  Bacteria  normal  normal  0.100705 
 
 
-
 
NC_011312  VSAL_I2193  methyl-accepting chemotaxis protein  35.34 
 
 
697 aa  127  8.000000000000001e-28  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0916  methyl-accepting chemotaxis protein  31.39 
 
 
543 aa  127  8.000000000000001e-28  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000029497  n/a   
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  34.52 
 
 
714 aa  126  1e-27  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  32.36 
 
 
621 aa  125  2e-27  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  30.36 
 
 
707 aa  125  2e-27  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_013456  VEA_004004  methyl-accepting chemotaxis protein  31.64 
 
 
663 aa  125  2e-27  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2016  methyl-accepting chemotaxis sensory transducer  31.91 
 
 
519 aa  125  2e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.103091 
 
 
-
 
NC_002947  PP_0562  methyl-accepting chemotaxis sensory transducer  29.37 
 
 
653 aa  125  3e-27  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  34.8 
 
 
620 aa  125  3e-27  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  37.12 
 
 
629 aa  125  3e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  32.85 
 
 
620 aa  125  3e-27  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1582  methyl-accepting chemotaxis sensory transducer  28.69 
 
 
678 aa  124  4e-27  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.85269 
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  32.85 
 
 
620 aa  124  4e-27  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  32.85 
 
 
620 aa  124  4e-27  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  32.85 
 
 
620 aa  124  5e-27  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  32.08 
 
 
643 aa  124  7e-27  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  36.23 
 
 
632 aa  124  7e-27  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_010424  Daud_0680  methyl-accepting chemotaxis sensory transducer  31.33 
 
 
679 aa  124  7e-27  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  30.85 
 
 
564 aa  124  8e-27  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  30.07 
 
 
547 aa  123  9e-27  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_002947  PP_2823  methyl-accepting chemotaxis transducer  30.3 
 
 
550 aa  123  9.999999999999999e-27  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  26.82 
 
 
640 aa  123  9.999999999999999e-27  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  35.22 
 
 
619 aa  123  9.999999999999999e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  31.96 
 
 
628 aa  123  9.999999999999999e-27  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.96 
 
 
628 aa  123  9.999999999999999e-27  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  35.32 
 
 
554 aa  122  1.9999999999999998e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  36.76 
 
 
626 aa  121  3e-26  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2783  methyl-accepting chemotaxisprotein  33.67 
 
 
690 aa  122  3e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.468562 
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  34.6 
 
 
640 aa  121  3.9999999999999996e-26  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_009831  Ssed_1498  methyl-accepting chemotaxis sensory transducer  31.71 
 
 
687 aa  121  3.9999999999999996e-26  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000111484  normal 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  30.4 
 
 
620 aa  121  3.9999999999999996e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_009654  Mmwyl1_4057  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
537 aa  121  3.9999999999999996e-26  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4603  methyl-accepting chemotaxis sensory transducer  27.63 
 
 
653 aa  121  4.9999999999999996e-26  Pseudomonas putida W619  Bacteria  normal  normal  0.149752 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  33.95 
 
 
559 aa  120  6e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  32.21 
 
 
715 aa  120  7.999999999999999e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  30.94 
 
 
554 aa  120  7.999999999999999e-26  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  32.66 
 
 
714 aa  119  9.999999999999999e-26  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_003910  CPS_4711  methyl-accepting chemotaxis protein  32.63 
 
 
633 aa  120  9.999999999999999e-26  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  32.56 
 
 
622 aa  120  9.999999999999999e-26  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  30.95 
 
 
541 aa  119  9.999999999999999e-26  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  30.45 
 
 
557 aa  119  1.9999999999999998e-25  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  36.21 
 
 
629 aa  119  1.9999999999999998e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  32.66 
 
 
714 aa  119  1.9999999999999998e-25  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01518  hypothetical protein  30.37 
 
 
674 aa  119  1.9999999999999998e-25  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  35.59 
 
 
628 aa  118  3e-25  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.2 
 
 
626 aa  118  3e-25  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_008463  PA14_43220  putative methyl-accepting chemotaxis transducer  34.84 
 
 
652 aa  118  3e-25  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.625872 
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  33.75 
 
 
626 aa  118  3.9999999999999997e-25  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  33.01 
 
 
633 aa  118  3.9999999999999997e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  33.8 
 
 
648 aa  118  3.9999999999999997e-25  Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
560 aa  118  3.9999999999999997e-25  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_008700  Sama_0622  putative methyl-accepting chemotaxis sensory transducer  31.51 
 
 
539 aa  117  5e-25  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.321986 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  29.58 
 
 
546 aa  117  6e-25  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_008577  Shewana3_0764  methyl-accepting chemotaxis sensory transducer  32.84 
 
 
620 aa  117  6.9999999999999995e-25  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0796  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
620 aa  117  6.9999999999999995e-25  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1352  methyl-accepting chemotaxis sensory transducer  35.32 
 
 
668 aa  117  7.999999999999999e-25  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.98 
 
 
627 aa  117  8.999999999999998e-25  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.28 
 
 
623 aa  116  1.0000000000000001e-24  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_009456  VC0395_0331  methyl-accepting chemotaxis protein  33.33 
 
 
578 aa  116  1.0000000000000001e-24  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  32.81 
 
 
558 aa  116  1.0000000000000001e-24  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_02418  hypothetical protein  31.16 
 
 
578 aa  116  1.0000000000000001e-24  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  33.45 
 
 
648 aa  116  1.0000000000000001e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_008321  Shewmr4_3174  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
620 aa  116  1.0000000000000001e-24  Shewanella sp. MR-4  Bacteria  normal  0.733563  normal  0.773778 
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  34.43 
 
 
554 aa  115  2.0000000000000002e-24  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  26.32 
 
 
533 aa  115  2.0000000000000002e-24  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  39 
 
 
673 aa  115  2.0000000000000002e-24  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.55 
 
 
554 aa  115  2.0000000000000002e-24  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  32.12 
 
 
542 aa  115  2.0000000000000002e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  32.81 
 
 
626 aa  115  2.0000000000000002e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  28.61 
 
 
650 aa  115  2.0000000000000002e-24  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_1066  methyl-accepting chemotaxis sensory transducer  33.85 
 
 
705 aa  115  2.0000000000000002e-24  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
674 aa  115  2.0000000000000002e-24  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0792  methyl-accepting chemotaxis sensory transducer  32.84 
 
 
620 aa  116  2.0000000000000002e-24  Shewanella sp. MR-7  Bacteria  normal  0.912748  normal  0.850506 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  31.6 
 
 
714 aa  115  2.0000000000000002e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
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