More than 300 homologs were found in PanDaTox collection
for query gene CPS_0139 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_0139  methyl-accepting chemotaxis protein  100 
 
 
650 aa  1299    Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3540  chemotaxis sensory transducer  31.87 
 
 
668 aa  225  2e-57  Shewanella denitrificans OS217  Bacteria  normal  0.502982  n/a   
 
 
-
 
NC_009997  Sbal195_4340  methyl-accepting chemotaxis sensory transducer  30.02 
 
 
660 aa  223  8e-57  Shewanella baltica OS195  Bacteria  normal  0.751262  normal  0.782794 
 
 
-
 
NC_011663  Sbal223_4136  methyl-accepting chemotaxis sensory transducer  29.85 
 
 
660 aa  221  3e-56  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4208  methyl-accepting chemotaxis sensory transducer  29.85 
 
 
660 aa  220  6e-56  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3848  methyl-accepting chemotaxis sensory transducer  29.89 
 
 
660 aa  216  9.999999999999999e-55  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3904  methyl-accepting chemotaxis sensory transducer  29.57 
 
 
658 aa  216  9.999999999999999e-55  Shewanella sp. MR-7  Bacteria  normal  0.202773  normal  0.313356 
 
 
-
 
NC_004347  SO_4635  methyl-accepting chemotaxis protein  30.1 
 
 
658 aa  215  1.9999999999999998e-54  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_4019  methyl-accepting chemotaxis sensory transducer  29.73 
 
 
658 aa  216  1.9999999999999998e-54  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_4019  methyl-accepting chemotaxis sensory transducer  32.35 
 
 
646 aa  215  1.9999999999999998e-54  Shewanella pealeana ATCC 700345  Bacteria  normal  0.723587  n/a   
 
 
-
 
NC_008321  Shewmr4_3813  methyl-accepting chemotaxis sensory transducer  29.4 
 
 
658 aa  214  2.9999999999999995e-54  Shewanella sp. MR-4  Bacteria  normal  normal  0.0320682 
 
 
-
 
NC_009092  Shew_3639  methyl-accepting chemotaxis sensory transducer  30.44 
 
 
652 aa  213  5.999999999999999e-54  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3512  putative methyl-accepting chemotaxis sensory transducer  30.11 
 
 
647 aa  210  6e-53  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0216  methyl-accepting chemotaxis sensory transducer  33.71 
 
 
648 aa  207  4e-52  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0148  methyl-accepting chemotaxis sensory transducer  30.64 
 
 
651 aa  205  2e-51  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4309  methyl-accepting chemotaxis sensory transducer  24.92 
 
 
628 aa  157  6e-37  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00619864  normal 
 
 
-
 
NC_009439  Pmen_0717  methyl-accepting chemotaxis sensory transducer  28.62 
 
 
654 aa  140  7.999999999999999e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1221  methyl-accepting chemotaxis sensory transducer  31.37 
 
 
564 aa  129  2.0000000000000002e-28  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000139892  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  35.96 
 
 
637 aa  125  3e-27  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_013216  Dtox_2016  methyl-accepting chemotaxis sensory transducer  30.21 
 
 
519 aa  123  9e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.103091 
 
 
-
 
NC_013512  Sdel_1432  chemotaxis sensory transducer  34.65 
 
 
546 aa  122  1.9999999999999998e-26  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.138665  n/a   
 
 
-
 
NC_002947  PP_0562  methyl-accepting chemotaxis sensory transducer  29.41 
 
 
653 aa  122  3e-26  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2101  methyl-accepting chemotaxis sensory transducer  34.14 
 
 
565 aa  122  3e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_0622  chemotaxis sensory transducer  28.06 
 
 
648 aa  120  7e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0601  methyl-accepting chemotaxis sensory transducer  29.07 
 
 
653 aa  120  9e-26  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1554  methyl-accepting chemotaxis protein  36.21 
 
 
684 aa  120  9.999999999999999e-26  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  34.05 
 
 
557 aa  117  5e-25  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  34.91 
 
 
620 aa  117  5e-25  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_007520  Tcr_1999  methyl-accepting chemotaxis sensory transducer  32.31 
 
 
405 aa  117  8.999999999999998e-25  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  31.31 
 
 
626 aa  116  1.0000000000000001e-24  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2719  methyl-accepting chemotaxis sensory transducer  36.51 
 
 
655 aa  116  1.0000000000000001e-24  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  34.09 
 
 
499 aa  116  1.0000000000000001e-24  Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  33.45 
 
 
564 aa  115  2.0000000000000002e-24  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_009656  PSPA7_5564  putative chemotaxis transducer  27.03 
 
 
657 aa  116  2.0000000000000002e-24  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0130  methyl-accepting chemotaxis sensory transducer  33.71 
 
 
671 aa  115  2.0000000000000002e-24  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0103  methyl-accepting chemotaxis protein  31.51 
 
 
521 aa  115  2.0000000000000002e-24  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2525  methyl-accepting chemotaxis sensory transducer  29.38 
 
 
538 aa  115  3e-24  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  31.66 
 
 
560 aa  115  3e-24  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_003910  CPS_1937  methyl-accepting chemotaxis protein  39.45 
 
 
662 aa  115  4.0000000000000004e-24  Colwellia psychrerythraea 34H  Bacteria  normal  0.0215017  n/a   
 
 
-
 
NC_009802  CCC13826_1039  protease htpx  32.04 
 
 
656 aa  114  4.0000000000000004e-24  Campylobacter concisus 13826  Bacteria  normal  0.0758551  n/a   
 
 
-
 
NC_010322  PputGB1_0607  methyl-accepting chemotaxis sensory transducer  28.26 
 
 
653 aa  114  5e-24  Pseudomonas putida GB-1  Bacteria  normal  normal  0.100705 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  30.77 
 
 
620 aa  114  5e-24  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_008789  Hhal_1714  methyl-accepting chemotaxis sensory transducer  30.28 
 
 
673 aa  114  5e-24  Halorhodospira halophila SL1  Bacteria  normal  0.712235  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  30.38 
 
 
640 aa  114  5e-24  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_008577  Shewana3_0764  methyl-accepting chemotaxis sensory transducer  27.07 
 
 
620 aa  114  7.000000000000001e-24  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_00464  methyl-accepting chemotaxis protein  33.46 
 
 
636 aa  113  1.0000000000000001e-23  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  33.68 
 
 
639 aa  113  1.0000000000000001e-23  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
620 aa  112  1.0000000000000001e-23  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_011312  VSAL_I2130  methyl-accepting chemotaxis protein  33.45 
 
 
546 aa  112  1.0000000000000001e-23  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.665531  n/a   
 
 
-
 
NC_011769  DvMF_2257  methyl-accepting chemotaxis sensory transducer  31.92 
 
 
603 aa  112  2.0000000000000002e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009715  CCV52592_2035  putative transducer  31.14 
 
 
626 aa  112  2.0000000000000002e-23  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1547  methyl-accepting chemotaxis sensory transducer  30.56 
 
 
407 aa  112  2.0000000000000002e-23  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  35.07 
 
 
653 aa  112  2.0000000000000002e-23  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  36.55 
 
 
622 aa  112  2.0000000000000002e-23  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
620 aa  112  2.0000000000000002e-23  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
620 aa  112  2.0000000000000002e-23  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  30.06 
 
 
620 aa  112  2.0000000000000002e-23  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_009784  VIBHAR_05936  hypothetical protein  30.24 
 
 
480 aa  112  2.0000000000000002e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  30.03 
 
 
541 aa  112  2.0000000000000002e-23  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_0079  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.41 
 
 
588 aa  112  2.0000000000000002e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.031352  n/a   
 
 
-
 
NC_009456  VC0395_0185  methyl-accepting chemotaxis protein  34.23 
 
 
770 aa  112  2.0000000000000002e-23  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  33.07 
 
 
638 aa  112  2.0000000000000002e-23  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3174  methyl-accepting chemotaxis sensory transducer  30.9 
 
 
620 aa  112  2.0000000000000002e-23  Shewanella sp. MR-4  Bacteria  normal  0.733563  normal  0.773778 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  35.9 
 
 
568 aa  112  2.0000000000000002e-23  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2636  methyl-accepting chemotaxis sensory transducer  29.38 
 
 
367 aa  111  3e-23  Desulfotomaculum reducens MI-1  Bacteria  normal  0.324426  n/a   
 
 
-
 
NC_009438  Sputcn32_0796  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
620 aa  112  3e-23  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3300  methyl-accepting chemotaxis protein  32.94 
 
 
535 aa  111  3e-23  Colwellia psychrerythraea 34H  Bacteria  normal  0.102754  n/a   
 
 
-
 
NC_004347  SO_3052  methyl-accepting chemotaxis protein  33.44 
 
 
579 aa  112  3e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_0516  methyl-accepting chemotaxis sensory transducer  36.74 
 
 
664 aa  112  3e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0344435  n/a   
 
 
-
 
NC_009457  VC0395_A1023  methyl-accepting chemotaxis protein  33.59 
 
 
578 aa  112  3e-23  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0792  methyl-accepting chemotaxis sensory transducer  30.9 
 
 
620 aa  112  3e-23  Shewanella sp. MR-7  Bacteria  normal  0.912748  normal  0.850506 
 
 
-
 
NC_009784  VIBHAR_05136  torS; sensor protein TorS  33.02 
 
 
558 aa  111  4.0000000000000004e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0259  hypothetical protein  32.2 
 
 
515 aa  111  4.0000000000000004e-23  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0524  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
539 aa  111  4.0000000000000004e-23  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0756  methyl-accepting chemotaxis protein  33.46 
 
 
558 aa  111  4.0000000000000004e-23  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  35.42 
 
 
622 aa  111  4.0000000000000004e-23  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_011830  Dhaf_0078  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.16 
 
 
588 aa  111  5e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.857462  n/a   
 
 
-
 
NC_003910  CPS_1267  methyl-accepting chemotaxis protein  31.94 
 
 
557 aa  110  5e-23  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  31.83 
 
 
554 aa  111  5e-23  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  33.08 
 
 
650 aa  110  5e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  29.32 
 
 
541 aa  111  5e-23  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  29.65 
 
 
628 aa  111  5e-23  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  31.99 
 
 
643 aa  110  6e-23  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_007005  Psyr_0071  histidine kinase, HAMP region: chemotaxis sensory transducer  35.23 
 
 
658 aa  110  6e-23  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3010  chemotaxis sensory transducer  31.46 
 
 
539 aa  110  6e-23  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1215  methyl-accepting chemotaxis sensory transducer  30.06 
 
 
678 aa  110  6e-23  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5186  methyl-accepting chemotaxis protein  26.3 
 
 
563 aa  110  6e-23  Bacillus cereus B4264  Bacteria  unclonable  0.000109018  n/a   
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  30.82 
 
 
545 aa  110  7.000000000000001e-23  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.82 
 
 
545 aa  110  7.000000000000001e-23  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000194984 
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  30.82 
 
 
545 aa  110  7.000000000000001e-23  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  30.82 
 
 
545 aa  110  7.000000000000001e-23  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_30820  putative methyl-accepting chemotaxis transducer  31.62 
 
 
535 aa  110  7.000000000000001e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0142633  hitchhiker  0.0000000000042709 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.42 
 
 
628 aa  110  7.000000000000001e-23  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_009457  VC0395_A0365  accessory colonization factor AcfB  33.95 
 
 
626 aa  110  8.000000000000001e-23  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
620 aa  110  8.000000000000001e-23  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0117  methyl-accepting chemotaxis protein  31.47 
 
 
658 aa  110  9.000000000000001e-23  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05097  sensor protein TorS  27.97 
 
 
542 aa  110  9.000000000000001e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_0620  methyl-accepting chemotaxis sensory transducer  30.11 
 
 
512 aa  110  9.000000000000001e-23  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000106495  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  31.54 
 
 
712 aa  110  9.000000000000001e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  35.5 
 
 
623 aa  110  1e-22  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
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