More than 300 homologs were found in PanDaTox collection
for query gene CPS_3300 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_3300  methyl-accepting chemotaxis protein  100 
 
 
535 aa  1073    Colwellia psychrerythraea 34H  Bacteria  normal  0.102754  n/a   
 
 
-
 
NC_007954  Sden_1963  chemotaxis sensory transducer  44.34 
 
 
535 aa  412  1e-113  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2525  methyl-accepting chemotaxis sensory transducer  36.5 
 
 
538 aa  335  1e-90  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0916  methyl-accepting chemotaxis protein  32.34 
 
 
543 aa  280  4e-74  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000029497  n/a   
 
 
-
 
NC_013456  VEA_003151  methyl-accepting chemotaxis protein  31.79 
 
 
541 aa  247  3e-64  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00103096  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  30.97 
 
 
541 aa  245  9.999999999999999e-64  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  31.65 
 
 
541 aa  239  9e-62  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
552 aa  212  2e-53  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  34.53 
 
 
552 aa  208  2e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  38.48 
 
 
521 aa  202  9.999999999999999e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  35.63 
 
 
632 aa  201  3.9999999999999996e-50  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  37.9 
 
 
521 aa  200  7e-50  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  35.55 
 
 
629 aa  199  7.999999999999999e-50  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  34.05 
 
 
638 aa  199  1.0000000000000001e-49  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  34.49 
 
 
564 aa  196  6e-49  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  36.41 
 
 
632 aa  196  9e-49  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  39.03 
 
 
555 aa  195  1e-48  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  36.31 
 
 
629 aa  195  2e-48  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  36.29 
 
 
541 aa  194  2e-48  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1334  methyl-accepting chemotaxis protein  37.71 
 
 
550 aa  194  3e-48  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  34.02 
 
 
638 aa  194  4e-48  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  38.19 
 
 
629 aa  192  1e-47  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  39.33 
 
 
629 aa  192  1e-47  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  33.67 
 
 
638 aa  192  2e-47  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.11 
 
 
624 aa  191  2.9999999999999997e-47  Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  35.54 
 
 
543 aa  191  2.9999999999999997e-47  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  41 
 
 
624 aa  191  4e-47  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  36 
 
 
544 aa  190  5e-47  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  35 
 
 
541 aa  190  5.999999999999999e-47  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  34.68 
 
 
639 aa  190  5.999999999999999e-47  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  41 
 
 
624 aa  190  7e-47  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  36.19 
 
 
620 aa  189  1e-46  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.67 
 
 
624 aa  189  1e-46  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  38.68 
 
 
674 aa  189  1e-46  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  34.47 
 
 
634 aa  188  2e-46  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
438 aa  187  4e-46  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  33.42 
 
 
411 aa  187  4e-46  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  38.1 
 
 
636 aa  187  5e-46  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.28 
 
 
523 aa  187  6e-46  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  37.22 
 
 
628 aa  186  7e-46  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009654  Mmwyl1_2301  methyl-accepting chemotaxis sensory transducer  36.69 
 
 
632 aa  186  7e-46  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.22 
 
 
628 aa  186  8e-46  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  37.78 
 
 
738 aa  186  8e-46  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  39.74 
 
 
637 aa  186  8e-46  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  36.96 
 
 
547 aa  186  1.0000000000000001e-45  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  36.13 
 
 
620 aa  185  1.0000000000000001e-45  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  37.22 
 
 
643 aa  185  2.0000000000000003e-45  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  38.07 
 
 
552 aa  185  2.0000000000000003e-45  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  38.06 
 
 
679 aa  185  2.0000000000000003e-45  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  33.72 
 
 
548 aa  185  2.0000000000000003e-45  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  35.58 
 
 
629 aa  185  2.0000000000000003e-45  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  34.49 
 
 
605 aa  185  2.0000000000000003e-45  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  38.07 
 
 
552 aa  185  2.0000000000000003e-45  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  36.72 
 
 
541 aa  185  2.0000000000000003e-45  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  33.69 
 
 
620 aa  185  2.0000000000000003e-45  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  34.75 
 
 
620 aa  184  3e-45  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
521 aa  184  3e-45  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  34.28 
 
 
636 aa  184  4.0000000000000006e-45  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  32.5 
 
 
634 aa  184  4.0000000000000006e-45  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  36.34 
 
 
638 aa  184  4.0000000000000006e-45  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  36.34 
 
 
638 aa  184  4.0000000000000006e-45  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
541 aa  184  4.0000000000000006e-45  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  36.18 
 
 
620 aa  184  4.0000000000000006e-45  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  36.34 
 
 
638 aa  184  5.0000000000000004e-45  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  36.34 
 
 
641 aa  184  5.0000000000000004e-45  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_007005  Psyr_1150  chemotaxis sensory transducer  35.81 
 
 
551 aa  183  6e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  36.1 
 
 
541 aa  183  6e-45  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  31.76 
 
 
773 aa  183  6e-45  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  34.46 
 
 
541 aa  183  7e-45  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  34.56 
 
 
541 aa  182  1e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  36.34 
 
 
638 aa  182  1e-44  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  36.34 
 
 
638 aa  182  2e-44  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  37.18 
 
 
638 aa  181  2e-44  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  36.34 
 
 
638 aa  182  2e-44  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  36.34 
 
 
638 aa  182  2e-44  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  33.11 
 
 
629 aa  181  2.9999999999999997e-44  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  37.04 
 
 
642 aa  181  2.9999999999999997e-44  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  34.91 
 
 
541 aa  181  2.9999999999999997e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  33.85 
 
 
625 aa  180  4.999999999999999e-44  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  33.99 
 
 
629 aa  180  4.999999999999999e-44  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.95 
 
 
626 aa  180  5.999999999999999e-44  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  36.42 
 
 
620 aa  180  7e-44  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  36.42 
 
 
620 aa  180  7e-44  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_007492  Pfl01_1418  chemotaxis sensory transducer  36.69 
 
 
541 aa  180  7e-44  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  36.42 
 
 
620 aa  179  8e-44  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  33.62 
 
 
621 aa  179  1e-43  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.74 
 
 
521 aa  179  1e-43  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  36.53 
 
 
545 aa  179  1e-43  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  35.74 
 
 
521 aa  179  1e-43  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  39.1 
 
 
634 aa  179  1e-43  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  35.01 
 
 
541 aa  179  1e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_011662  Tmz1t_0106  methyl-accepting chemotaxis sensory transducer  27.14 
 
 
540 aa  179  1e-43  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  36.65 
 
 
564 aa  179  2e-43  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  35.33 
 
 
642 aa  178  2e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  36.33 
 
 
646 aa  178  2e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  32.68 
 
 
568 aa  178  3e-43  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  34.08 
 
 
573 aa  178  3e-43  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_007005  Psyr_2059  histidine kinase, HAMP region: chemotaxis sensory transducer  33.9 
 
 
491 aa  178  3e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.116428  normal  0.539616 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  37.34 
 
 
626 aa  177  3e-43  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_010506  Swoo_2282  methyl-accepting chemotaxis sensory transducer  33.7 
 
 
664 aa  177  4e-43  Shewanella woodyi ATCC 51908  Bacteria  normal  0.330304  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>