More than 300 homologs were found in PanDaTox collection
for query gene Psyr_1150 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_1334  methyl-accepting chemotaxis protein  90.93 
 
 
550 aa  985    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1150  chemotaxis sensory transducer  100 
 
 
551 aa  1082    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  63.84 
 
 
541 aa  407  1.0000000000000001e-112  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  59.95 
 
 
541 aa  397  1e-109  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  59.2 
 
 
541 aa  389  1e-107  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  57.39 
 
 
541 aa  372  1e-101  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  66.45 
 
 
541 aa  369  1e-101  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  57.39 
 
 
541 aa  371  1e-101  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  61.58 
 
 
541 aa  372  1e-101  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_007492  Pfl01_2907  chemotaxis sensory transducer  60.51 
 
 
541 aa  348  1e-94  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.300582 
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  40.89 
 
 
541 aa  343  5.999999999999999e-93  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  53.01 
 
 
425 aa  341  2e-92  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_009656  PSPA7_3666  chemotaxis transducer  53.33 
 
 
541 aa  340  2.9999999999999998e-92  Pseudomonas aeruginosa PA7  Bacteria  normal  0.260935  n/a   
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  57.55 
 
 
541 aa  339  8e-92  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  59.24 
 
 
541 aa  337  2.9999999999999997e-91  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  46.74 
 
 
546 aa  330  3e-89  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  41.54 
 
 
541 aa  329  7e-89  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  48.77 
 
 
541 aa  324  2e-87  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_007492  Pfl01_4266  chemotaxis sensory transducer  50.96 
 
 
546 aa  322  9.000000000000001e-87  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.261421  normal 
 
 
-
 
NC_009656  PSPA7_4141  chemotaxis transducer  55.46 
 
 
541 aa  321  1.9999999999999998e-86  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  47.09 
 
 
541 aa  321  1.9999999999999998e-86  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3577  methyl-accepting chemotaxis protein  50 
 
 
542 aa  320  3e-86  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  46.85 
 
 
541 aa  320  6e-86  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  46.85 
 
 
541 aa  318  2e-85  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  51.39 
 
 
541 aa  317  3e-85  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  49.48 
 
 
541 aa  317  3e-85  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3351  histidine kinase, HAMP region: chemotaxis sensory transducer  52.69 
 
 
570 aa  317  3e-85  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0540062  normal  0.0241334 
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  51.4 
 
 
541 aa  315  9.999999999999999e-85  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_007005  Psyr_3348  histidine kinase, HAMP region: chemotaxis sensory transducer  54.89 
 
 
542 aa  315  9.999999999999999e-85  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.946905  normal  0.024921 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  41.8 
 
 
541 aa  313  5.999999999999999e-84  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_008463  PA14_48030  putative methyl-accepting chemotaxis transducer  54.41 
 
 
541 aa  311  1e-83  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.478475 
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  52.41 
 
 
546 aa  312  1e-83  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  51.3 
 
 
542 aa  310  5.9999999999999995e-83  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_007005  Psyr_1491  histidine kinase, HAMP region: chemotaxis sensory transducer  44.63 
 
 
539 aa  308  2.0000000000000002e-82  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4624  methyl-accepting chemotaxis protein  44.63 
 
 
539 aa  307  3e-82  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.140064  n/a   
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  40.15 
 
 
541 aa  306  8.000000000000001e-82  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_004578  PSPTO_5569  methyl-accepting chemotaxis protein  39.63 
 
 
541 aa  300  3e-80  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2593  methyl-accepting chemotaxis sensory transducer  46.94 
 
 
540 aa  298  1e-79  Pseudomonas putida W619  Bacteria  normal  normal  0.591477 
 
 
-
 
NC_007492  Pfl01_1418  chemotaxis sensory transducer  54.11 
 
 
541 aa  297  3e-79  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  38.96 
 
 
541 aa  296  7e-79  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_002947  PP_2643  methyl-accepting chemotaxis sensory transducer  46.08 
 
 
550 aa  294  3e-78  Pseudomonas putida KT2440  Bacteria  normal  0.0855376  normal 
 
 
-
 
NC_009512  Pput_2149  methyl-accepting chemotaxis sensory transducer  45.83 
 
 
541 aa  293  5e-78  Pseudomonas putida F1  Bacteria  normal  0.608007  normal 
 
 
-
 
NC_007005  Psyr_2109  histidine kinase, HAMP region: chemotaxis sensory transducer  50.44 
 
 
539 aa  287  4e-76  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.950044  normal  0.0787865 
 
 
-
 
NC_010322  PputGB1_3184  methyl-accepting chemotaxis sensory transducer  51.59 
 
 
541 aa  282  1e-74  Pseudomonas putida GB-1  Bacteria  normal  0.799555  normal 
 
 
-
 
NC_009438  Sputcn32_1438  methyl-accepting chemotaxis sensory transducer  46.24 
 
 
540 aa  278  2e-73  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2773  methyl-accepting chemotaxis sensory transducer  49.04 
 
 
540 aa  275  2.0000000000000002e-72  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2054  methyl-accepting chemotaxis sensory transducer  50.32 
 
 
539 aa  269  1e-70  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  43.63 
 
 
640 aa  263  8.999999999999999e-69  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  41.05 
 
 
543 aa  259  6e-68  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  44.38 
 
 
629 aa  258  2e-67  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3323  methyl-accepting chemotaxis sensory transducer  46.5 
 
 
539 aa  255  1.0000000000000001e-66  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3322  methyl-accepting chemotaxis sensory transducer  34.98 
 
 
539 aa  255  1.0000000000000001e-66  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.910778 
 
 
-
 
NC_004578  PSPTO_0995  methyl-accepting chemotaxis protein  42.99 
 
 
557 aa  255  1.0000000000000001e-66  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.467879  n/a   
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  43.92 
 
 
646 aa  254  3e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_007005  Psyr_0860  histidine kinase, HAMP region: chemotaxis sensory transducer  50 
 
 
558 aa  253  5.000000000000001e-66  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.572392 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  41.78 
 
 
640 aa  252  1e-65  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_007005  Psyr_2878  histidine kinase, HAMP region: chemotaxis sensory transducer  50.31 
 
 
542 aa  248  2e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.425048  normal  0.909341 
 
 
-
 
NC_004578  PSPTO_2997  methyl-accepting chemotaxis protein  49.22 
 
 
542 aa  246  8e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.686035  n/a   
 
 
-
 
NC_004578  PSPTO_3291  methyl-accepting chemotaxis protein  34.93 
 
 
542 aa  246  8e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.470345  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  45.54 
 
 
638 aa  246  9e-64  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2319  methyl-accepting chemotaxis sensory transducer  48.41 
 
 
546 aa  246  9.999999999999999e-64  Pseudomonas putida W619  Bacteria  normal  0.217936  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  45.54 
 
 
638 aa  246  9.999999999999999e-64  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  40.87 
 
 
633 aa  245  1.9999999999999999e-63  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  44.9 
 
 
638 aa  243  5e-63  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  32.96 
 
 
515 aa  243  7e-63  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  47.8 
 
 
679 aa  242  1e-62  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  41.47 
 
 
640 aa  240  5e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  44.9 
 
 
638 aa  239  1e-61  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  44.68 
 
 
637 aa  238  3e-61  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  39.16 
 
 
634 aa  237  4e-61  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  40.96 
 
 
640 aa  237  4e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  40 
 
 
619 aa  237  5.0000000000000005e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  46.35 
 
 
547 aa  234  2.0000000000000002e-60  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  43.02 
 
 
638 aa  234  4.0000000000000004e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  40.22 
 
 
541 aa  234  4.0000000000000004e-60  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_007492  Pfl01_0728  chemotaxis sensory transducer  42.19 
 
 
639 aa  233  1e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  46.82 
 
 
624 aa  232  1e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  46.34 
 
 
647 aa  232  1e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  36.71 
 
 
546 aa  231  4e-59  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.02 
 
 
523 aa  230  6e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_010322  PputGB1_4653  methyl-accepting chemotaxis sensory transducer  38.07 
 
 
639 aa  227  4e-58  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  37.53 
 
 
639 aa  227  5.0000000000000005e-58  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  39.71 
 
 
637 aa  226  9e-58  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  43.2 
 
 
636 aa  226  9e-58  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  43.41 
 
 
674 aa  226  1e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_002947  PP_4658  methyl-accepting chemotaxis sensory transducer  38.07 
 
 
639 aa  225  2e-57  Pseudomonas putida KT2440  Bacteria  normal  0.415489  normal 
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  44.27 
 
 
639 aa  224  2e-57  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  38.94 
 
 
638 aa  224  3e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008700  Sama_2502  putative methyl-accepting chemotaxis sensory transducer  35.13 
 
 
649 aa  224  3e-57  Shewanella amazonensis SB2B  Bacteria  normal  0.988754  normal 
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  47.74 
 
 
647 aa  224  3e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0778  methyl-accepting chemotaxis sensory transducer  37.42 
 
 
639 aa  224  3e-57  Pseudomonas putida W619  Bacteria  normal  normal  0.66043 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  41.86 
 
 
650 aa  224  4e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  42.77 
 
 
540 aa  223  4.9999999999999996e-57  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  40.12 
 
 
676 aa  222  9.999999999999999e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  41.77 
 
 
681 aa  222  9.999999999999999e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  37.77 
 
 
605 aa  221  3e-56  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  38.3 
 
 
647 aa  220  6e-56  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003886  methyl-accepting chemotaxis protein  31.03 
 
 
542 aa  220  6e-56  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3266  methyl-accepting chemotaxis sensory transducer  37.78 
 
 
543 aa  219  8.999999999999998e-56  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  40.63 
 
 
647 aa  219  8.999999999999998e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
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