| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3628 |
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| Symbol | |
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| ID | 5194935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4054022 |
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| End bp | 4055587 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588084 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001268936 |
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| Protein GI | 148548834 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAACA ACCAGCCGAT TACCCAGAGA GAACGGACTT TCCCTGCCCA GCAGCGGTTG
ATCTCCACTA CCAACGCCAA GGGTGTGGTC ACCTACTGCA ACGATGCCTT TATCGAAATC
AGTGGATTCA CCCGCGAGGA GCTGACTGGC GCACCGCACA ACCTGGTGCG TCACCCCGAC
GTACCGCCTG CCGTGTTTGC CCATATGTGG CAGACCCTCA AGCAGGGCCA GCCGTGGATG
GGCATCGTCA AGAACCGCTG CAAATCCGGC GACCATTACT GGGTCAACGC CTATGTCACA
CCCATCTTCG ATAACAACCA GGTTGTCGGC TTCGAGTCGG TGCGGGTCAA GCCCACTGCC
GAGCAGATCC GCCGTGCCGA GGCCCTGTAT CAGCGCATCA ACCAGGGCAA GCCACCGGTA
CCGCGCCGCG ACAAGTGGCT GCCAGTGCTG CAGGACTGGC TACCGTTCAT CCTGATCAGC
CAGGTGGGCT TCCTGATCGG CAACTGGCTG GGTCATTCCT GGGGCTTTGC CTTGGCCGCA
GGGCTTTCGG TACCACTGGG CCTGCTCGGC CTGAGCTGGC AGCAGCGCGG CCTCAAGCGC
CTGCTGCGCC TGGCCGAGCA AACCACTTCC GACCCACTGA TCGCGCAGAT GTACACCGAC
AGCCGTGGCG TGCAGGCGCG CCTGGAAATG GCCATGCTCA GCCAGGACGC ACGCATGAAA
ACCTGCCTGA CCCGCCTACA AGACAGTGCC GAACACCTGA GCGACCAGGC ACGCCAGTCC
GATGCCTTGG CGCACAAGAG CTCTACGGGG CTGGAGCGCC AGCGGGTGGA GACCGAGCAA
GTCGCCGCTG CGGTAAACCA GATGGCCGCC ACCACTCAGG AAGTGGCCAA CCATGTGCAG
CGCACCGCCG ATGCCACCCA GGAAGCCAAC CGCCTGACCA GCCAGGGCCG GCAGATTGCC
GGAGAAACCC GCGAGGCCAT CGAGCGCCTG TCGGCGGCAG TGGGCGAGAC CGGCCAGACG
GTTACGCAAC TGGCCAAGGA CAGCGACGAG ATTGGTGGCG TGGTCGACGT GATCAAGGGC
ATCGCCGACC AGACCAACCT GCTGGCACTG AACGCAGCCA TTGAAGCAGC GCGCGCCGGT
GAAATGGGCC GTGGTTTTGC CGTGGTGGCT GATGAAGTGC GTCAGTTGGC CCAGCGCACC
GCCGAATCCA CCGGGCAGAT CCACGGCCTG ATCGCCAAGC TGCAACAGAC CGCCAGTAAC
GCAGTGCTGA CCATGGAAAC CGGCCACCGC CAGGCACAGG AAGGCGTCGA CCGGGTAATG
CAGGCCGATG AGGCGTTGGT AGGCATCAGC GAAGCGGTGG CCAATATCAC CGACATGGCC
ACCCAGATTG CTGCTGCAAC CGAGGAGCAG ACCGCAGTGG CTGACGAGAT CAGCCGCAAC
ATCAGCACCA TTGCCGAACT GGCCGACCAG ACCGCCGAAC AGGCGCAGCA CTCGGCACTG
CTGAGCGAAG AACTGACCAG CACGGCGGGC AGCCAGTATT CGCTGGTGGA GCGCTTCAAC
CGCTGA
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| Protein sequence | MRNNQPITQR ERTFPAQQRL ISTTNAKGVV TYCNDAFIEI SGFTREELTG APHNLVRHPD
VPPAVFAHMW QTLKQGQPWM GIVKNRCKSG DHYWVNAYVT PIFDNNQVVG FESVRVKPTA
EQIRRAEALY QRINQGKPPV PRRDKWLPVL QDWLPFILIS QVGFLIGNWL GHSWGFALAA
GLSVPLGLLG LSWQQRGLKR LLRLAEQTTS DPLIAQMYTD SRGVQARLEM AMLSQDARMK
TCLTRLQDSA EHLSDQARQS DALAHKSSTG LERQRVETEQ VAAAVNQMAA TTQEVANHVQ
RTADATQEAN RLTSQGRQIA GETREAIERL SAAVGETGQT VTQLAKDSDE IGGVVDVIKG
IADQTNLLAL NAAIEAARAG EMGRGFAVVA DEVRQLAQRT AESTGQIHGL IAKLQQTASN
AVLTMETGHR QAQEGVDRVM QADEALVGIS EAVANITDMA TQIAAATEEQ TAVADEISRN
ISTIAELADQ TAEQAQHSAL LSEELTSTAG SQYSLVERFN R
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