| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1963 |
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| Symbol | |
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| ID | 4018452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2326427 |
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| End bp | 2328034 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955985 |
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| Product | chemotaxis sensory transducer |
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| Protein accession | YP_562969 |
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| Protein GI | 91793318 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTGA AATCAATTCA GCATAAGATC TACGCGTCAC TGGCGTTTAC CGGTGTCTTG
GTCTTAACCG CTAGCATAGT CATTAACTCT AACCAGCAAC GCGCCTTAGC CCAAGAAACC
GTTGAGAGTA CTGTGCATTT GTTGGCCGAC AATTATTTCG ACTCCCTCAA TACCATGATG
CTCACTGGCA CTATGGCCAA CCGTGACATT CTCAGCAATA AAATTCGCAG TCAGGCCAAT
ATTAAGGATG CGCATATTAT TCGCGGCCAG CAGGTGAATA CCCTCTATGG TCAAGGTAAA
GCAGAAGAAC AGGCGCAAAC CCCAGCAGAA GAGGCGGCGC TGTTAGGCAA AGAAGCCATG
TTTATCGAAA AACGCGATAA TTTTAGGGTG CTCACCTATT TAAAACCTCT GGTTGCCAGC
GCAGACAGTA ATGGCGTTAA CTGTTTGGGC TGTCATCAGG CACAAGAAGG TGATGTCCTT
GGGGTGGTGA AACTGAGCTA TTCGCTGCAA CAAATTGACA AGGCGGTCAA TCGAAACACC
CTGTTTAGCA CAGGATTATT AACTGTCATT TTCTTAGTCA CCTTTATTTT TCTTGGGGTA
CTGTTTAGAA AACTCTTTAT CAAGCGCCTT AAACGCATAG GTAACATCAT GCGCTCAGCG
ACGCAGAACA AAGACTTGAG CGCTAATATT AATGACAGCT CAGGGGATGA GTTAGGGCTA
CTAGCGGCTA ACTTCAACCA AATGATGGCA TCCTTCAAAG ACAGCATACT CAAGGTGTCT
GCTTCATCGA AAGTGCTCAT CCAATCCGCC GAAACCATAC ACAGCACGGC AGAAGCCACC
GAAGAGGCTA TCAAGCATCA AAAAGAAGGC ACGGACTCTG TGGCAGCCGC CATTAATGAA
TTGGGCACAA GTTCAGCAGA AGTGAGAAAC ACCACACATT TTGCCTCGCA AAAATCAGAT
GAAACCAACA GGTTGGCTAA GCACAATACC CTGATCGCCG AGCAAACAGA GCAGAGTATT
AACCAACTTG CGGCGGATGT ACGTGACGCG GCCTCTAAGG TTGGCCAGTT GCAACAGCAA
ACCTTAGAAG TGGGCAAGGT ACTGGAGGTC ATCAGTGCCA TCGCCGAGCA AACCAATCTG
TTGGCGTTAA ACGCCGCCAT TGAAGCGGCA AGGGCAGGTG AAACCGGTCG CGGTTTCGCC
GTGGTTGCCG ATGAAGTCCG CTCTTTGGCC ACTAAGACTC ACCATTCCAC CGATGAAATT
CGCAAAACCA TCGCTAAGCT GCAACAAGAA GCTCAAAATA CAGTCATTGC CATGAATGCT
TCGTCCACCG AAGCGGATGA GCGGGCTAAT CAAGTGCAGT TAGTGGCGCA GGCGCTGCGG
GACATCTCTG TGCAGATGAG TGAAATTAAT CAGCTTAATG TGCACATGGC CGATGCCACT
GAGCAGCAAA ACCTTGCCGC GGAAGAAATT AACCGCAGCG TGATTGGCAT TCGTGATAAC
GCCGAGCAAT CCTTGGTGGA TGCCCGCGGC AGTAAGTTGG TCAGTGAAAA ATTGTTACGT
TTGTCTAAAT CCTTAGACGA GCAGGTGGGG CTTTTTAAGC TGGATTAA
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| Protein sequence | MALKSIQHKI YASLAFTGVL VLTASIVINS NQQRALAQET VESTVHLLAD NYFDSLNTMM
LTGTMANRDI LSNKIRSQAN IKDAHIIRGQ QVNTLYGQGK AEEQAQTPAE EAALLGKEAM
FIEKRDNFRV LTYLKPLVAS ADSNGVNCLG CHQAQEGDVL GVVKLSYSLQ QIDKAVNRNT
LFSTGLLTVI FLVTFIFLGV LFRKLFIKRL KRIGNIMRSA TQNKDLSANI NDSSGDELGL
LAANFNQMMA SFKDSILKVS ASSKVLIQSA ETIHSTAEAT EEAIKHQKEG TDSVAAAINE
LGTSSAEVRN TTHFASQKSD ETNRLAKHNT LIAEQTEQSI NQLAADVRDA ASKVGQLQQQ
TLEVGKVLEV ISAIAEQTNL LALNAAIEAA RAGETGRGFA VVADEVRSLA TKTHHSTDEI
RKTIAKLQQE AQNTVIAMNA SSTEADERAN QVQLVAQALR DISVQMSEIN QLNVHMADAT
EQQNLAAEEI NRSVIGIRDN AEQSLVDARG SKLVSEKLLR LSKSLDEQVG LFKLD
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