| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3300 |
|---|
| Symbol | |
|---|
| ID | 3521182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 3422885 |
|---|
| End bp | 3424492 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637285749 |
|---|
| Product | methyl-accepting chemotaxis protein |
|---|
| Protein accession | YP_269976 |
|---|
| Protein GI | 71280713 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.102754 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAA ACCTGTCACT GGCTAAAAAA ATTCACTTAG CACTCACCTT AATTGGTGCT
ATTTTTTTAA GTACAACGAT TTTCTTTTTT CATCATGATG AAAAAGAGCT GGCAGAGCAC
TTTGTTGAAC GAAACCTTGA AAGCCTTGCA CTTAATTATT TTGACTCGGT CAATACCATG
ATGCTCACAG GCACTATCGC TAATCGACAA CTTATTCAAA ATAAAATTCT CAGCCAAGAC
GATATTGTAG AAGCAAGAAT TCTACGTACC CAAGCGGTTA ATAAAGTTTT TGGTGAAGGC
TTCCCTGATC AGAGTGCAAA AAGTGCATTT GAACGAGAAG GTCTAGCGGG TAAAAGAGCG
TTTAAAAAGT TTGAACTTGA TGGCAAACGT ATGATGAGCT TTATTATACC GGTCAAAGCA
AGTTCAGATT ATCGCGGCAC CAATTGTTTA ACTTGCCATC AGGTTAGTGA AAACGAAATA
TTAGGCGCAG TAAAACTTAC CTATGACTTA TCAACCGTAG ATAAAGAAAT CACCAGCTCT
ATTACTCAAG CTGCAATTTT ACAATTGGTC ATTACCTTAA TTTGTTTTAC CTTGTTAAGC
CTTACCCTGA GAAAGCTAAT TTTCTTCCGA TTAAAACGCC TAAGCAATTC TATTAAAACG
GCTGCTGAAG AACTCGATTT AAATAAAGAA ATTAAAGTTA ATTATCAAGA TGAACTCGGT
TCAGTAAGCA TAGCGCTTAA TGACATGATG AGTAAGTTTA GAATTAGCTT CATGTCAATT
GCCCAAGCGA GTGAACAATT AACTGAATCA GCTAAAGAAG TTGATAAAAT ATCTTCGCTA
ACACTCGAAG CAGTGTTAGA GCAAAAGAAT GGCACCGACT CTGTCGCTGC TGCAATTAAT
GAGTTAGATA CCTCTGCGAA TGAAGTACAA CATAATACGC AAAGTGCAGC TGATAAATCA
GTTTCAGCAA ATGAAAGGAC CTCACAGGGG TTAATTCTTG TTGAACAAGC GAGAGTTGGC
ATTAATGATC TCAGAGATAA AGTTGTTGAA AACACAGCGA TGATCACTGA TTTGAGTAAT
AAAACCAATG AAGTGGGCAG TGTTTTAGAA GTCATTACCG CCATTGCTGA ACAGACAAAT
TTATTAGCGT TAAATGCTGC GATAGAAGCA GCAAGAGCTG GCGAACAAGG TAGAGGTTTT
GCTGTCGTCG CCGATGAAGT TCGTTCTTTA GCAACTCGTA CTCGTGAATC AATTGAGCAA
ATACACGTAA CAATGAGTCG ATTACAAGTT GGAGCAAAAG GTGCTGTTGA TTCAATGAAT
GTGGTTAGTC AACAAGCCAG CGAAAAAGCT GAAGATGTTG CTAATGTTGC TGATTTATTG
ACAAGTATCA GTGCTGAAAT TCAGGAATTA GACGAACTTA ACTGTCAAAT TTCAGATGCC
GCGACGCAGC AGAACTTAGC CGCTGATGAA ATTAACATTA ATGTCGTTAA TATAAGTAAT
GTTGCTGAAA AATCGAGTGA TGATGCTATT CGTGGAAAAG AGATCAGCGA GCATTTACTG
TCACTTGCTT ATGAATTAAA TACCCAGTTA ACAAAATTTA AGTTATAA
|
|---|
| Protein sequence | MLKNLSLAKK IHLALTLIGA IFLSTTIFFF HHDEKELAEH FVERNLESLA LNYFDSVNTM
MLTGTIANRQ LIQNKILSQD DIVEARILRT QAVNKVFGEG FPDQSAKSAF EREGLAGKRA
FKKFELDGKR MMSFIIPVKA SSDYRGTNCL TCHQVSENEI LGAVKLTYDL STVDKEITSS
ITQAAILQLV ITLICFTLLS LTLRKLIFFR LKRLSNSIKT AAEELDLNKE IKVNYQDELG
SVSIALNDMM SKFRISFMSI AQASEQLTES AKEVDKISSL TLEAVLEQKN GTDSVAAAIN
ELDTSANEVQ HNTQSAADKS VSANERTSQG LILVEQARVG INDLRDKVVE NTAMITDLSN
KTNEVGSVLE VITAIAEQTN LLALNAAIEA ARAGEQGRGF AVVADEVRSL ATRTRESIEQ
IHVTMSRLQV GAKGAVDSMN VVSQQASEKA EDVANVADLL TSISAEIQEL DELNCQISDA
ATQQNLAADE ININVVNISN VAEKSSDDAI RGKEISEHLL SLAYELNTQL TKFKL
|
|---|
| |