| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0148 |
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| Symbol | |
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| ID | 6114371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 179886 |
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| End bp | 181841 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641631629 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001758544 |
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| Protein GI | 170724518 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT CAACCCTCTC TCTTTCCGCT TCCGCTTGCT TACTGCTTCT CGCGGGTTTA
CTTGCCTCCG TGGTGATATG GAGTAACCAA GAGCGTCAGC AGATTGAAAA TAGAGCAACT
CAACTCCAAG AGTTACAACA AGGCTTTCTG GTTGAAGTAA GAGGAGAGCT AGATGTCTAT
CTGACCACAG GCGCTGCCAA TAAACTTGAG CAGGCAAAAA TCTTGTTACA GCAGATAGAG
AGCCAACTCA CCCTGTTTAT GGACAGCGAC AAAGATAATC TTGCATCACT CATAAACCAA
TTTATTCAAC GACTCGATAC CGATTATCGC GCCGCAGGTA AACTTGCAGG CAACCCGAGA
CAGCTATTGG CCCACGCTGA GTCAGAGATG ATGGACAACA ATCGTCATCT AACCAAATAC
GCTATCCAAG CTCAGGCTGA ACATCCCAAA TTGGCAGCGC AATATCTGGC TATCACCCGC
CAACTGCCTC CGTTAGTTTA TCAACTGTCC CAGCTCACCC AAGACTATTT GATAGGCAAA
GATAGAAAGC TGAAAACCTA TCTAGAAACC AATATTCGGG AGCTATTACT TTGGCATGAT
ACACTCGAGG CGCTGCCGCT GATAGGTATT TTCGAGACCC AAGAAGCGGA CGAATTTGAG
CTAGGAGGCT CAGAAAGTGA GGTCATAGAG GTAGGGGAAG ATTTTTACCT CGAACTACTG
AGCTTAACTG AACGTTACAA TAAAGAGGTG GCGAATACAC ATAGCTTGTT GCAAGAAAAT
CAAGCAACTC AGTCACAACT CAAGTTGGAA ATTGTTGAGA TTGAACAAGC ATTTCTGACT
CTCAGCCAAG CTCAATCAAT ACAGAATCAG CAGATTAAAA ATCAGTTACA ATACACGCTC
TATATCGTTG TCTCCATACT TGCACTATTT GCCATCACCT ATCTTATCCT TCAGCAGCGA
AGAGTTGTGG CTCCCCTAAA ACAGTTAAAC CAAGCATTTC ATACACTCAG TGCATCGAAT
AATCGTCAGC GACTCACCAT ACAGAGGCGC TGTGAAACCG GGCAGATAGC TGGTCACTTT
AACCAGCTAC TACAACGCTT TGAGGATGAA GATGAATCCC AACGGCAACA GATAAGTCAG
GTATCACTCT CACTCTCTAA ACTTGTCAGC CGTATTACAC AGATCACACG CAGCACAGAG
GAGACCCAAA CCATAGTCAC AGATGCACAA TCACAAACTG ATGAGATAAA ACTCTTGGCT
CAAGAGGTCA ACAACACCTC TAAGTTGGTT GAGCAAAGTG CAGAGCAAAC CATGCAACAG
ATGCAGTTAA GCCACACCGA ATCGGAAGCC GTACTACTAG CAACCCAAGA GACTCAAAAT
GCCGTAGAGC AGTGTCATTT GTCACTTTCA GGGCTGACAA CCTCTGTCGT TGACGTGTCT
AAAATTATTG ATGTTATCGG TAATATTGCC GAGCAAACTA ACTTATTAGC ACTCAATGCA
GCCATTGAAG CCGCTAGGGC AGGAGAGCAA GGTAGAGGGT TTGCCGTGGT AGCCGATGAG
GTACGTAACC TCTCCTACCG AACACAAGAG TCTTTAAAGG AGATCCAGGG GATTTTAGCT
CAGTTAACCA ATGCAAATCA GTCACTAGAA ACCAGTATGT CAGGCATATC CCAAGCAGCA
ATTAGCCAGA AAACCAGAGC ACAAAGTCTC TCTAATTTAG CTCAAGAGGT TCAATCTCAG
GCTCGTGATA TGGCAGTGAC AGCAAAACAG GGCTCGGTCA ATGCACTGCA ACAGGTCAAC
TACTTAGATA ATTTTAGCGC CTCTATGGAA ACTCTAAGAA ACCAAGCCTT TGCAGCATCA
CAGCAAACAT CCATCATTGC CACCGAAGTG GAGCTGGGCG TTGAAAACAT AGAGTTAAGC
TTAGGTATAG AGAAGAAAGA ATTAAAAGTG GCCTAA
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| Protein sequence | MKISTLSLSA SACLLLLAGL LASVVIWSNQ ERQQIENRAT QLQELQQGFL VEVRGELDVY
LTTGAANKLE QAKILLQQIE SQLTLFMDSD KDNLASLINQ FIQRLDTDYR AAGKLAGNPR
QLLAHAESEM MDNNRHLTKY AIQAQAEHPK LAAQYLAITR QLPPLVYQLS QLTQDYLIGK
DRKLKTYLET NIRELLLWHD TLEALPLIGI FETQEADEFE LGGSESEVIE VGEDFYLELL
SLTERYNKEV ANTHSLLQEN QATQSQLKLE IVEIEQAFLT LSQAQSIQNQ QIKNQLQYTL
YIVVSILALF AITYLILQQR RVVAPLKQLN QAFHTLSASN NRQRLTIQRR CETGQIAGHF
NQLLQRFEDE DESQRQQISQ VSLSLSKLVS RITQITRSTE ETQTIVTDAQ SQTDEIKLLA
QEVNNTSKLV EQSAEQTMQQ MQLSHTESEA VLLATQETQN AVEQCHLSLS GLTTSVVDVS
KIIDVIGNIA EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRNLSYRTQE SLKEIQGILA
QLTNANQSLE TSMSGISQAA ISQKTRAQSL SNLAQEVQSQ ARDMAVTAKQ GSVNALQQVN
YLDNFSASME TLRNQAFAAS QQTSIIATEV ELGVENIELS LGIEKKELKV A
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