More than 300 homologs were found in PanDaTox collection
for query gene Swoo_0148 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011663  Sbal223_4136  methyl-accepting chemotaxis sensory transducer  63.99 
 
 
660 aa  737    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3639  methyl-accepting chemotaxis sensory transducer  60.06 
 
 
652 aa  681    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4635  methyl-accepting chemotaxis protein  63.06 
 
 
658 aa  702    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_4019  methyl-accepting chemotaxis sensory transducer  63.83 
 
 
658 aa  711    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4208  methyl-accepting chemotaxis sensory transducer  63.99 
 
 
660 aa  738    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3848  methyl-accepting chemotaxis sensory transducer  63.37 
 
 
660 aa  701    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3813  methyl-accepting chemotaxis sensory transducer  63.99 
 
 
658 aa  712    Shewanella sp. MR-4  Bacteria  normal  normal  0.0320682 
 
 
-
 
NC_008322  Shewmr7_3904  methyl-accepting chemotaxis sensory transducer  63.83 
 
 
658 aa  711    Shewanella sp. MR-7  Bacteria  normal  0.202773  normal  0.313356 
 
 
-
 
NC_009901  Spea_4019  methyl-accepting chemotaxis sensory transducer  57.61 
 
 
646 aa  653    Shewanella pealeana ATCC 700345  Bacteria  normal  0.723587  n/a   
 
 
-
 
NC_010506  Swoo_0148  methyl-accepting chemotaxis sensory transducer  100 
 
 
651 aa  1296    Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_4340  methyl-accepting chemotaxis sensory transducer  64.14 
 
 
660 aa  740    Shewanella baltica OS195  Bacteria  normal  0.751262  normal  0.782794 
 
 
-
 
NC_008345  Sfri_0216  methyl-accepting chemotaxis sensory transducer  54.56 
 
 
648 aa  575  1.0000000000000001e-163  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3540  chemotaxis sensory transducer  48.91 
 
 
668 aa  538  9.999999999999999e-153  Shewanella denitrificans OS217  Bacteria  normal  0.502982  n/a   
 
 
-
 
NC_008700  Sama_3512  putative methyl-accepting chemotaxis sensory transducer  48.05 
 
 
647 aa  503  1e-141  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_0139  methyl-accepting chemotaxis protein  30.62 
 
 
650 aa  193  1e-47  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4309  methyl-accepting chemotaxis sensory transducer  27.8 
 
 
628 aa  169  1e-40  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00619864  normal 
 
 
-
 
NC_009656  PSPA7_5564  putative chemotaxis transducer  27.53 
 
 
657 aa  134  3.9999999999999996e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  34.21 
 
 
674 aa  132  2.0000000000000002e-29  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_007492  Pfl01_0622  chemotaxis sensory transducer  30.34 
 
 
648 aa  131  4.0000000000000003e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0916  methyl-accepting chemotaxis protein  36.46 
 
 
543 aa  130  6e-29  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000029497  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  35.19 
 
 
559 aa  127  8.000000000000001e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  33.43 
 
 
620 aa  127  8.000000000000001e-28  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  36.16 
 
 
621 aa  127  9e-28  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  32.27 
 
 
541 aa  126  2e-27  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_008321  Shewmr4_3174  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
620 aa  125  2e-27  Shewanella sp. MR-4  Bacteria  normal  0.733563  normal  0.773778 
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  32.27 
 
 
541 aa  124  4e-27  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  32.61 
 
 
541 aa  124  4e-27  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  32.27 
 
 
541 aa  125  4e-27  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  32.13 
 
 
545 aa  124  5e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_0792  methyl-accepting chemotaxis sensory transducer  36.92 
 
 
620 aa  124  5e-27  Shewanella sp. MR-7  Bacteria  normal  0.912748  normal  0.850506 
 
 
-
 
NC_008463  PA14_64060  putative chemotaxis transducer  28.75 
 
 
657 aa  124  6e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  36.88 
 
 
620 aa  124  7e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  32.55 
 
 
620 aa  123  9.999999999999999e-27  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  34.01 
 
 
557 aa  123  9.999999999999999e-27  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  32.55 
 
 
620 aa  123  9.999999999999999e-27  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0764  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
620 aa  122  9.999999999999999e-27  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_1931  chemotaxis sensory transducer  33.65 
 
 
621 aa  122  1.9999999999999998e-26  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  32.55 
 
 
620 aa  122  1.9999999999999998e-26  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_009654  Mmwyl1_2301  methyl-accepting chemotaxis sensory transducer  31.22 
 
 
632 aa  122  1.9999999999999998e-26  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  31.65 
 
 
640 aa  122  1.9999999999999998e-26  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  36.13 
 
 
620 aa  121  4.9999999999999996e-26  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_011138  MADE_03417  methyl-accepting chemotaxis protein  35.74 
 
 
674 aa  121  4.9999999999999996e-26  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.617562  n/a   
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  34.75 
 
 
545 aa  121  4.9999999999999996e-26  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
560 aa  120  6e-26  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_013512  Sdel_1073  chemotaxis sensory transducer  31.39 
 
 
633 aa  120  7e-26  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00919731  n/a   
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  32.21 
 
 
620 aa  120  9e-26  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2193  methyl-accepting chemotaxis protein  34.64 
 
 
697 aa  119  9.999999999999999e-26  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  32.78 
 
 
632 aa  120  9.999999999999999e-26  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  31.31 
 
 
564 aa  120  9.999999999999999e-26  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_011313  VSAL_II0170  methyl-accepting chemotaxis protein  39.08 
 
 
543 aa  119  1.9999999999999998e-25  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  33.47 
 
 
638 aa  119  1.9999999999999998e-25  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_3838  methyl-accepting chemotaxis protein  37.7 
 
 
620 aa  119  1.9999999999999998e-25  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  32.84 
 
 
620 aa  119  1.9999999999999998e-25  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  33.47 
 
 
638 aa  119  1.9999999999999998e-25  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  32.99 
 
 
553 aa  119  1.9999999999999998e-25  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_4141  chemotaxis transducer  35.32 
 
 
541 aa  119  1.9999999999999998e-25  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  33.47 
 
 
638 aa  118  3e-25  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0717  methyl-accepting chemotaxis sensory transducer  25.78 
 
 
654 aa  118  3e-25  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011313  VSAL_II0756  methyl-accepting chemotaxis protein  30.8 
 
 
558 aa  118  3e-25  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1498  methyl-accepting chemotaxis sensory transducer  34.94 
 
 
687 aa  118  3e-25  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000111484  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  33.33 
 
 
623 aa  118  3.9999999999999997e-25  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003151  methyl-accepting chemotaxis protein  32.53 
 
 
541 aa  118  3.9999999999999997e-25  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00103096  n/a   
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  35.06 
 
 
560 aa  118  3.9999999999999997e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0902  methyl-accepting chemotaxis sensory transducer  33.55 
 
 
673 aa  118  3.9999999999999997e-25  Shewanella sp. MR-4  Bacteria  normal  normal  0.73728 
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  31.7 
 
 
620 aa  118  3.9999999999999997e-25  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  36.05 
 
 
548 aa  117  5e-25  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_008322  Shewmr7_3118  methyl-accepting chemotaxis sensory transducer  33.55 
 
 
673 aa  117  5e-25  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0209  methyl-accepting chemotaxis sensory transducer  32.47 
 
 
677 aa  117  5e-25  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  32.35 
 
 
541 aa  117  5e-25  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3212  methyl-accepting chemotaxis sensory transducer  33.55 
 
 
673 aa  117  6e-25  Shewanella sp. ANA-3  Bacteria  normal  0.990285  normal  0.659639 
 
 
-
 
NC_011773  BCAH820_0631  methyl-accepting chemotaxis protein  30 
 
 
660 aa  117  6e-25  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_3577  methyl-accepting chemotaxis protein  41.14 
 
 
542 aa  117  6e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3666  chemotaxis transducer  33.22 
 
 
541 aa  117  6.9999999999999995e-25  Pseudomonas aeruginosa PA7  Bacteria  normal  0.260935  n/a   
 
 
-
 
NC_009439  Pmen_0782  methyl-accepting chemotaxis sensory transducer  35.27 
 
 
676 aa  117  7.999999999999999e-25  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_009092  Shew_2301  methyl-accepting chemotaxis sensory transducer  32.4 
 
 
705 aa  117  7.999999999999999e-25  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  35.16 
 
 
643 aa  117  8.999999999999998e-25  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  33.86 
 
 
638 aa  117  8.999999999999998e-25  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_007954  Sden_2955  chemotaxis sensory transducer  32.04 
 
 
497 aa  117  8.999999999999998e-25  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0601  methyl-accepting chemotaxis sensory transducer  27.36 
 
 
653 aa  116  1.0000000000000001e-24  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  33.82 
 
 
546 aa  116  1.0000000000000001e-24  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.33 
 
 
626 aa  116  1.0000000000000001e-24  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  31.37 
 
 
625 aa  116  1.0000000000000001e-24  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  35.29 
 
 
628 aa  116  1.0000000000000001e-24  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  31.83 
 
 
620 aa  116  1.0000000000000001e-24  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_009654  Mmwyl1_0922  methyl-accepting chemotaxis sensory transducer  35.32 
 
 
674 aa  117  1.0000000000000001e-24  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  30.82 
 
 
640 aa  116  1.0000000000000001e-24  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_008463  PA14_48030  putative methyl-accepting chemotaxis transducer  35.02 
 
 
541 aa  116  1.0000000000000001e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.478475 
 
 
-
 
NC_010424  Daud_0680  methyl-accepting chemotaxis sensory transducer  30.19 
 
 
679 aa  115  2.0000000000000002e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0544  methyl-accepting chemotaxis protein  30 
 
 
660 aa  115  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  0.0138447  n/a   
 
 
-
 
NC_009438  Sputcn32_0796  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
620 aa  115  2.0000000000000002e-24  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0486  methyl-accepting chemotaxis protein  30 
 
 
660 aa  116  2.0000000000000002e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0488  methyl-accepting chemotaxis protein  30 
 
 
660 aa  115  2.0000000000000002e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3348  histidine kinase, HAMP region: chemotaxis sensory transducer  44.3 
 
 
542 aa  115  2.0000000000000002e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.946905  normal  0.024921 
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  31.42 
 
 
438 aa  115  2.0000000000000002e-24  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0575  methyl-accepting chemotaxis protein  30 
 
 
660 aa  115  2.0000000000000002e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.29 
 
 
628 aa  116  2.0000000000000002e-24  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  31.27 
 
 
639 aa  115  2.0000000000000002e-24  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_012793  GWCH70_1221  methyl-accepting chemotaxis sensory transducer  31.68 
 
 
564 aa  115  3e-24  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000139892  n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  30.63 
 
 
626 aa  115  3e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_007492  Pfl01_4266  chemotaxis sensory transducer  33.69 
 
 
546 aa  115  3e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.261421  normal 
 
 
-
 
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